RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 ZNF473Q8WTR7 871 aaKnown RBP10.58□□□□□ -0.72
PHC1-208ENST00000540574 ALG3Q92685 438 aa10.58□□□□□ -0.72
PHC1-208ENST00000540574 PWWP2AQ96N64 755 aa10.58□□□□□ -0.72
PHC1-208ENST00000540574 RIT2Q99578 217 aa10.58□□□□□ -0.72
PHC1-208ENST00000540574 TRIM7Q9C029 511 aa10.58□□□□□ -0.72
PHC1-208ENST00000540574 NSRP1Q9H0G5 558 aaKnown RBP10.58□□□□□ -0.72
PHC1-208ENST00000540574 NEUROG2Q9H2A3 272 aa10.58□□□□□ -0.72
PHC1-208ENST00000540574 ATP6V0A4Q9HBG4 840 aa10.58□□□□□ -0.72
PHC1-208ENST00000540574 PSD3Q9NYI0 1048 aa10.58□□□□□ -0.72
PHC1-208ENST00000540574 SLC9A2Q9UBY0 812 aa10.58□□□□□ -0.72
PHC1-208ENST00000540574 TBX20Q9UMR3 447 aa10.58□□□□□ -0.72
PHC1-208ENST00000540574 RIPK3Q9Y572 518 aa10.58□□□□□ -0.72
PHC1-208ENST00000540574 SYNGAP1Q96PV0 1343 aa10.58□□□□□ -0.72
PHC1-208ENST00000540574 RTN2O75298 545 aa10.57□□□□□ -0.72
PHC1-208ENST00000540574 PIAS1O75925 651 aa10.57□□□□□ -0.72
PHC1-208ENST00000540574 PYGMP11217 842 aa10.57□□□□□ -0.72
PHC1-208ENST00000540574 RRM1P23921 792 aa10.57□□□□□ -0.72
PHC1-208ENST00000540574 MAGEA9P43362 315 aa10.57□□□□□ -0.72
PHC1-208ENST00000540574 SPIRE1Q08AE8 756 aa10.57□□□□□ -0.72
PHC1-208ENST00000540574 SMTNL2Q2TAL5 461 aa10.57□□□□□ -0.72
PHC1-208ENST00000540574 MIS18BP1Q6P0N0 1132 aa10.57□□□□□ -0.72
PHC1-208ENST00000540574 NOP9Q86U38 636 aaKnown RBP10.57□□□□□ -0.72
PHC1-208ENST00000540574 GIMAP7Q8NHV1 300 aa10.57□□□□□ -0.72
PHC1-208ENST00000540574 OTUD5Q96G74 571 aa10.57□□□□□ -0.72
PHC1-208ENST00000540574 PDCD2LQ9BRP1 358 aa10.57□□□□□ -0.72
PHC1-208ENST00000540574 ERP44Q9BS26 406 aa10.57□□□□□ -0.72
PHC1-208ENST00000540574 ERVK-5Q9HDB9 667 aa10.57□□□□□ -0.72
PHC1-208ENST00000540574 MAGED2Q9UNF1 606 aaPredicted RBP10.57□□□□□ -0.72
PHC1-208ENST00000540574 CSADQ9Y600 493 aa10.57□□□□□ -0.72
PHC1-208ENST00000540574 CYP3A7-CYP3A51PA0A087WV96 503 aa10.57□□□□□ -0.72
PHC1-208ENST00000540574 GMNCA6NCL1 334 aa10.57□□□□□ -0.72
PHC1-208ENST00000540574 FOXO6A8MYZ6 492 aa10.57□□□□□ -0.72
PHC1-208ENST00000540574 ADRB2P07550 413 aa10.57□□□□□ -0.72
PHC1-208ENST00000540574 VIL1P09327 827 aaKnown RBP10.57□□□□□ -0.72
PHC1-208ENST00000540574 KRT10P13645 584 aa10.57□□□□□ -0.72
PHC1-208ENST00000540574 CYP3A7P24462 503 aa10.57□□□□□ -0.72
PHC1-208ENST00000540574 PPP2R5AQ15172 486 aa10.57□□□□□ -0.72
PHC1-208ENST00000540574 Q3C1V9 767 aa10.57□□□□□ -0.72
PHC1-208ENST00000540574 TAOK1Q7L7X3 1001 aa10.57□□□□□ -0.72
PHC1-208ENST00000540574 SLC5A5Q92911 643 aa10.57□□□□□ -0.72
PHC1-208ENST00000540574 CYFIP2Q96F07 1278 aa10.57□□□□□ -0.72
PHC1-208ENST00000540574 SUCLA2Q9P2R7 463 aaPredicted RBP10.57□□□□□ -0.72
PHC1-208ENST00000540574 PCDHA2Q9Y5H9 948 aa10.57□□□□□ -0.72
PHC1-208ENST00000540574 IGLV3-22A0A075B6J6 115 aa10.57□□□□□ -0.72
PHC1-208ENST00000540574 OPLAHO14841 1288 aa10.57□□□□□ -0.72
PHC1-208ENST00000540574 ATP2A1O14983 1001 aa10.57□□□□□ -0.72
PHC1-208ENST00000540574 WDR46O15213 610 aaKnown RBP10.57□□□□□ -0.72
PHC1-208ENST00000540574 SPAG7O75391 227 aa10.57□□□□□ -0.72
PHC1-208ENST00000540574 JAK3P52333 1124 aa10.57□□□□□ -0.72
PHC1-208ENST00000540574 PPP2R5DQ14738 602 aa10.57□□□□□ -0.72
PHC1-208ENST00000540574 HIBCHQ6NVY1 386 aaPredicted RBP10.57□□□□□ -0.72
PHC1-208ENST00000540574 EFCAB13Q8IY85 973 aa10.57□□□□□ -0.72
PHC1-208ENST00000540574 GPD1LQ8N335 351 aa10.57□□□□□ -0.72
PHC1-208ENST00000540574 C7orf31Q8N865 590 aa10.57□□□□□ -0.72
PHC1-208ENST00000540574 CCDC89Q8N998 374 aa10.57□□□□□ -0.72
PHC1-208ENST00000540574 MAK16Q9BXY0 300 aaKnown RBP10.57□□□□□ -0.72
PHC1-208ENST00000540574 FRMD3A2A2Y4 597 aa10.56□□□□□ -0.72
PHC1-208ENST00000540574 DCDC2CA8MYV0 355 aa10.56□□□□□ -0.72
PHC1-208ENST00000540574 HLA-DRAP01903 254 aa10.56□□□□□ -0.72
PHC1-208ENST00000540574 CYP11B1P15538 503 aa10.56□□□□□ -0.72
PHC1-208ENST00000540574 CNTN2Q02246 1040 aa10.56□□□□□ -0.72
PHC1-208ENST00000540574 ZBTB16Q05516 673 aa10.56□□□□□ -0.72
PHC1-208ENST00000540574 DNAJC24Q6P3W2 148 aa10.56□□□□□ -0.72
PHC1-208ENST00000540574 TBC1D1Q86TI0 1168 aaPredicted RBP10.56□□□□□ -0.72
PHC1-208ENST00000540574 PRMT1Q99873 361 aaKnown RBP10.56□□□□□ -0.72
PHC1-208ENST00000540574 STMN4Q9H169 189 aaPredicted RBP10.56□□□□□ -0.72
PHC1-208ENST00000540574 SLITRK6Q9H5Y7 841 aa10.56□□□□□ -0.72
PHC1-208ENST00000540574 AGO4Q9HCK5 861 aaKnown RBP10.56□□□□□ -0.72
PHC1-208ENST00000540574 ZNF302Q9NR11 478 aa10.56□□□□□ -0.72
PHC1-208ENST00000540574 RNF19AQ9NV58 838 aa10.56□□□□□ -0.72
PHC1-208ENST00000540574 IRS2Q9Y4H2 1338 aa10.56□□□□□ -0.72
PHC1-208ENST00000540574 SHBGP04278 402 aa10.56□□□□□ -0.72
PHC1-208ENST00000540574 RPSAP08865 295 aaKnown RBP10.56□□□□□ -0.72
PHC1-208ENST00000540574 CHN1P15882 459 aa10.56□□□□□ -0.72
PHC1-208ENST00000540574 ASTE1Q2TB18 679 aaPredicted RBP10.56□□□□□ -0.72
PHC1-208ENST00000540574 VSIG1Q86XK7 387 aa10.56□□□□□ -0.72
PHC1-208ENST00000540574 TRIM50Q86XT4 487 aa10.56□□□□□ -0.72
PHC1-208ENST00000540574 SULF1Q8IWU6 871 aa10.56□□□□□ -0.72
PHC1-208ENST00000540574 CCDC63Q8NA47 563 aa10.56□□□□□ -0.72
PHC1-208ENST00000540574 RNF149Q8NC42 400 aa10.56□□□□□ -0.72
PHC1-208ENST00000540574 WNK4Q96J92 1243 aa10.56□□□□□ -0.72
PHC1-208ENST00000540574 JPH2Q9BR39 696 aaPredicted RBP10.56□□□□□ -0.72
PHC1-208ENST00000540574 GGA3Q9NZ52 723 aa10.56□□□□□ -0.72
PHC1-208ENST00000540574 FBXO40Q9UH90 709 aa10.56□□□□□ -0.72
PHC1-208ENST00000540574 TCRBV7S2A1N4TA0A589 114 aa10.56□□□□□ -0.72
PHC1-208ENST00000540574 CYP3A4P08684 503 aa10.56□□□□□ -0.72
PHC1-208ENST00000540574 CIITAP33076 1130 aa10.56□□□□□ -0.72
PHC1-208ENST00000540574 PGM5Q15124 567 aa10.56□□□□□ -0.72
PHC1-208ENST00000540574 TTC16Q8NEE8 873 aa10.56□□□□□ -0.72
PHC1-208ENST00000540574 HSPH1Q92598 858 aa10.56□□□□□ -0.72
PHC1-208ENST00000540574 ARHGEF2Q92974 986 aaKnown RBP10.56□□□□□ -0.72
PHC1-208ENST00000540574 MKNK1Q9BUB5 465 aa10.56□□□□□ -0.72
PHC1-208ENST00000540574 ALG13Q9NP73 1137 aaKnown RBP10.56□□□□□ -0.72
PHC1-208ENST00000540574 SAYSD1Q9NPB0 183 aa10.56□□□□□ -0.72
PHC1-208ENST00000540574 PARP2Q9UGN5 583 aa10.56□□□□□ -0.72
PHC1-208ENST00000540574 AKT3Q9Y243 479 aa10.56□□□□□ -0.72
PHC1-208ENST00000540574 CCDC88AQ3V6T2 1871 aa10.55□□□□□ -0.72
PHC1-208ENST00000540574 EIF4E1BA6NMX2 242 aaKnown RBP10.55□□□□□ -0.72
PHC1-208ENST00000540574 MIF4GDA9UHW6 222 aaKnown RBP10.55□□□□□ -0.72
PHC1-208ENST00000540574 GRAP2O75791 330 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms