RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 PTPRHQ9HD43 1115 aa14.46□□□□□ -0.09
SEMA4D-223ENST00000540475 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.46□□□□□ -0.09
SEMA4D-223ENST00000540475 SNTG2Q9NY99 539 aa14.46□□□□□ -0.09
SEMA4D-223ENST00000540475 KLK14Q9P0G3 267 aa14.46□□□□□ -0.09
SEMA4D-223ENST00000540475 ADAM28Q9UKQ2 775 aa14.46□□□□□ -0.09
SEMA4D-223ENST00000540475 DOCK8Q8NF50 2099 aa14.45□□□□□ -0.1
SEMA4D-223ENST00000540475 C2CD4DB7Z1M9 353 aa14.45□□□□□ -0.1
SEMA4D-223ENST00000540475 E9PMD0 336 aa14.45□□□□□ -0.1
SEMA4D-223ENST00000540475 ADH1AP07327 375 aa14.45□□□□□ -0.1
SEMA4D-223ENST00000540475 GJB2P29033 226 aa14.45□□□□□ -0.1
SEMA4D-223ENST00000540475 HOXD11P31277 338 aaPredicted RBP14.45□□□□□ -0.1
SEMA4D-223ENST00000540475 CA8P35219 290 aa14.45□□□□□ -0.1
SEMA4D-223ENST00000540475 MAPK7Q13164 816 aa14.45□□□□□ -0.1
SEMA4D-223ENST00000540475 USP41Q3LFD5 358 aa14.45□□□□□ -0.1
SEMA4D-223ENST00000540475 DCAF4L1Q3SXM0 396 aa14.45□□□□□ -0.1
SEMA4D-223ENST00000540475 XKR4Q5GH76 650 aa14.45□□□□□ -0.1
SEMA4D-223ENST00000540475 EEF1DP3Q658K8 133 aa14.45□□□□□ -0.1
SEMA4D-223ENST00000540475 ARL6IP4Q66PJ3 421 aaKnown RBP14.45□□□□□ -0.1
SEMA4D-223ENST00000540475 RINT1Q6NUQ1 792 aa14.45□□□□□ -0.1
SEMA4D-223ENST00000540475 FUT10Q6P4F1 479 aa14.45□□□□□ -0.1
SEMA4D-223ENST00000540475 LILRA6Q6PI73 481 aa14.45□□□□□ -0.1
SEMA4D-223ENST00000540475 PLCD3Q8N3E9 789 aa14.45□□□□□ -0.1
SEMA4D-223ENST00000540475 DEPTORQ8TB45 409 aa14.45□□□□□ -0.1
SEMA4D-223ENST00000540475 FEZF2Q8TBJ5 459 aa14.45□□□□□ -0.1
SEMA4D-223ENST00000540475 KCNN1Q92952 543 aa14.45□□□□□ -0.1
SEMA4D-223ENST00000540475 TIPINQ9BVW5 301 aa14.45□□□□□ -0.1
SEMA4D-223ENST00000540475 CXCL16Q9H2A7 254 aa14.45□□□□□ -0.1
SEMA4D-223ENST00000540475 ARHGAP28Q9P2N2 729 aa14.45□□□□□ -0.1
SEMA4D-223ENST00000540475 PARP2Q9UGN5 583 aa14.45□□□□□ -0.1
SEMA4D-223ENST00000540475 DPP7Q9UHL4 492 aa14.45□□□□□ -0.1
SEMA4D-223ENST00000540475 PHLPP2Q6ZVD8 1323 aa14.44□□□□□ -0.1
SEMA4D-223ENST00000540475 PP2D1A8MPX8 630 aa14.44□□□□□ -0.1
SEMA4D-223ENST00000540475 K7ERI5 159 aa14.44□□□□□ -0.1
SEMA4D-223ENST00000540475 SLC26A4O43511 780 aa14.44□□□□□ -0.1
SEMA4D-223ENST00000540475 RECQL4O94761 1208 aa14.44□□□□□ -0.1
SEMA4D-223ENST00000540475 SSBP05455 408 aaKnown RBP eCLIP14.44□□□□□ -0.1
SEMA4D-223ENST00000540475 THP07101 528 aa14.44□□□□□ -0.1
SEMA4D-223ENST00000540475 GUCY2CP25092 1073 aa14.44□□□□□ -0.1
SEMA4D-223ENST00000540475 CDC25AP30304 524 aa14.44□□□□□ -0.1
SEMA4D-223ENST00000540475 NPTX2P47972 431 aa14.44□□□□□ -0.1
SEMA4D-223ENST00000540475 HSP90AA2PQ14568 343 aaPredicted RBP14.44□□□□□ -0.1
SEMA4D-223ENST00000540475 ALKAL1Q6UXT8 129 aa14.44□□□□□ -0.1
SEMA4D-223ENST00000540475 TMC5Q6UXY8 1006 aa14.44□□□□□ -0.1
SEMA4D-223ENST00000540475 KCNK18Q7Z418 384 aa14.44□□□□□ -0.1
SEMA4D-223ENST00000540475 UBALD2Q8IYN6 164 aa14.44□□□□□ -0.1
SEMA4D-223ENST00000540475 PNMA5Q96PV4 448 aa14.44□□□□□ -0.1
SEMA4D-223ENST00000540475 PAAF1Q9BRP4 392 aa14.44□□□□□ -0.1
SEMA4D-223ENST00000540475 ADPGKQ9BRR6 497 aa14.44□□□□□ -0.1
SEMA4D-223ENST00000540475 KIFC3Q9BVG8 833 aa14.44□□□□□ -0.1
SEMA4D-223ENST00000540475 POLD4Q9HCU8 107 aa14.44□□□□□ -0.1
SEMA4D-223ENST00000540475 TNFSF13BQ9Y275 285 aa14.44□□□□□ -0.1
SEMA4D-223ENST00000540475 USP20Q9Y2K6 914 aa14.44□□□□□ -0.1
SEMA4D-223ENST00000540475 RBM19Q9Y4C8 960 aaKnown RBP14.44□□□□□ -0.1
SEMA4D-223ENST00000540475 USP34Q70CQ2 3546 aa14.44□□□□□ -0.1
SEMA4D-223ENST00000540475 DOCK6Q96HP0 2047 aa14.43□□□□□ -0.1
SEMA4D-223ENST00000540475 TMEM189-UBE2V1I3L0A0 370 aa14.43□□□□□ -0.1
SEMA4D-223ENST00000540475 C2CD2LO14523 706 aa14.43□□□□□ -0.1
SEMA4D-223ENST00000540475 BRD1O95696 1058 aa14.43□□□□□ -0.1
SEMA4D-223ENST00000540475 WEE2P0C1S8 567 aa14.43□□□□□ -0.1
SEMA4D-223ENST00000540475 PROZP22891 400 aa14.43□□□□□ -0.1
SEMA4D-223ENST00000540475 PEX3P56589 373 aa14.43□□□□□ -0.1
SEMA4D-223ENST00000540475 CREMQ03060 361 aa14.43□□□□□ -0.1
SEMA4D-223ENST00000540475 ATF7IP2Q5U623 682 aa14.43□□□□□ -0.1
SEMA4D-223ENST00000540475 TAS1R3Q7RTX0 852 aa14.43□□□□□ -0.1
SEMA4D-223ENST00000540475 SYT2Q8N9I0 419 aaPredicted RBP14.43□□□□□ -0.1
SEMA4D-223ENST00000540475 PBXIP1Q96AQ6 731 aa14.43□□□□□ -0.1
SEMA4D-223ENST00000540475 DRC1Q96MC2 740 aa14.43□□□□□ -0.1
SEMA4D-223ENST00000540475 PPP1R10Q96QC0 940 aaKnown RBP14.43□□□□□ -0.1
SEMA4D-223ENST00000540475 ACO2Q99798 780 aaKnown RBP14.43□□□□□ -0.1
SEMA4D-223ENST00000540475 RUSC1Q9BVN2 902 aa14.43□□□□□ -0.1
SEMA4D-223ENST00000540475 PLEKHA4Q9H4M7 779 aa14.43□□□□□ -0.1
SEMA4D-223ENST00000540475 UPF2Q9HAU5 1272 aaKnown RBP14.43□□□□□ -0.1
SEMA4D-223ENST00000540475 MAN1C1Q9NR34 630 aa14.43□□□□□ -0.1
SEMA4D-223ENST00000540475 KCND2Q9NZV8 630 aa14.43□□□□□ -0.1
SEMA4D-223ENST00000540475 KCNG1Q9UIX4 513 aa14.43□□□□□ -0.1
SEMA4D-223ENST00000540475 SORCS3Q9UPU3 1222 aa14.43□□□□□ -0.1
SEMA4D-223ENST00000540475 DMDP11532 3685 aa14.43□□□□□ -0.1
SEMA4D-223ENST00000540475 ZDBF2Q9HCK1 2354 aa14.42□□□□□ -0.1
SEMA4D-223ENST00000540475 SF3B1O75533 1304 aaKnown RBP eCLIP14.42□□□□□ -0.1
SEMA4D-223ENST00000540475 MYO15AQ9UKN7 3530 aa14.42□□□□□ -0.1
SEMA4D-223ENST00000540475 ABLIM1O14639 778 aa14.42□□□□□ -0.1
SEMA4D-223ENST00000540475 HIP1RO75146 1068 aa14.42□□□□□ -0.1
SEMA4D-223ENST00000540475 TADA2AO75478 443 aa14.42□□□□□ -0.1
SEMA4D-223ENST00000540475 GLUD1P00367 558 aa14.42□□□□□ -0.1
SEMA4D-223ENST00000540475 CUL4AQ13619 759 aa14.42□□□□□ -0.1
SEMA4D-223ENST00000540475 MCTP1Q6DN14 999 aa14.42□□□□□ -0.1
SEMA4D-223ENST00000540475 FBXL6Q8N531 539 aa14.42□□□□□ -0.1
SEMA4D-223ENST00000540475 TDRD5Q8NAT2 981 aaKnown RBP14.42□□□□□ -0.1
SEMA4D-223ENST00000540475 KREMEN2Q8NCW0 462 aa14.42□□□□□ -0.1
SEMA4D-223ENST00000540475 SPIRE2Q8WWL2 714 aa14.42□□□□□ -0.1
SEMA4D-223ENST00000540475 PIK3R5Q8WYR1 880 aa14.42□□□□□ -0.1
SEMA4D-223ENST00000540475 AK8Q96MA6 479 aa14.42□□□□□ -0.1
SEMA4D-223ENST00000540475 NT5C3AQ9H0P0 336 aa14.42□□□□□ -0.1
SEMA4D-223ENST00000540475 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.42□□□□□ -0.1
SEMA4D-223ENST00000540475 CCDC195A0A1B0GUA6 201 aa14.41□□□□□ -0.1
SEMA4D-223ENST00000540475 H3BQV1 296 aa14.41□□□□□ -0.1
SEMA4D-223ENST00000540475 TGM5O43548 720 aa14.41□□□□□ -0.1
SEMA4D-223ENST00000540475 KIF4AO95239 1232 aa14.41□□□□□ -0.1
SEMA4D-223ENST00000540475 GRM5P41594 1212 aa14.41□□□□□ -0.1
SEMA4D-223ENST00000540475 SLC12A3P55017 1021 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms