RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 CEP72Q9P209 647 aa8.29□□□□□ -1.08
CCDC60-204ENST00000539847 STK17AQ9UEE5 414 aa8.29□□□□□ -1.08
CCDC60-204ENST00000539847 INTUQ9ULD6 942 aa8.29□□□□□ -1.08
CCDC60-204ENST00000539847 TTC7AQ9ULT0 858 aaPredicted RBP8.29□□□□□ -1.08
CCDC60-204ENST00000539847 DIS3Q9Y2L1 958 aaKnown RBP8.29□□□□□ -1.08
CCDC60-204ENST00000539847 MAP4K5Q9Y4K4 846 aa8.29□□□□□ -1.08
CCDC60-204ENST00000539847 CAPN6Q9Y6Q1 641 aa8.29□□□□□ -1.08
CCDC60-204ENST00000539847 TRIM49BA6NDI0 452 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 TMEM229AB2RXF0 380 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 WNT7AO00755 349 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 PRKAB2O43741 272 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 GFPT2O94808 682 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 SLC25A27O95847 323 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 GBP1P32455 592 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 MCM7P33993 719 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 COPB2P35606 906 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 GRM5P41594 1212 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 DRG2P55039 364 aaKnown RBP8.28□□□□□ -1.08
CCDC60-204ENST00000539847 NPEPPSP55786 919 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 PPP2R2AP63151 447 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 GUCY2DQ02846 1103 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 ITIH4Q14624 930 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 SHHQ15465 462 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 SHROOM1Q2M3G4 852 aaPredicted RBP8.28□□□□□ -1.08
CCDC60-204ENST00000539847 ANKRD20A8PQ5CZ79 823 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 RNF187Q5TA31 235 aaPredicted RBP8.28□□□□□ -1.08
CCDC60-204ENST00000539847 GKAP1Q5VSY0 366 aaPredicted RBP8.28□□□□□ -1.08
CCDC60-204ENST00000539847 WDR78Q5VTH9 848 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 HGSNATQ68CP4 663 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 NFRKBQ6P4R8 1299 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 CYB5D1Q6P9G0 228 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 UNC13DQ70J99 1090 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 CACNA2D4Q7Z3S7 1137 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 MAATS1Q7Z4T9 603 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 GSPT2Q8IYD1 628 aaKnown RBP8.28□□□□□ -1.08
CCDC60-204ENST00000539847 CACNA2D3Q8IZS8 1091 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 USP38Q8NB14 1042 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 TRPV1Q8NER1 839 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 CASKIN2Q8WXE0 1202 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 TAF4BQ92750 862 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 STAMQ92783 540 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 SEC16BQ96JE7 1060 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 CEP63Q96MT8 703 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 GDAP1L1Q96MZ0 367 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 TOX2Q96NM4 488 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 RIOK1Q9BRS2 568 aaKnown RBP8.28□□□□□ -1.08
CCDC60-204ENST00000539847 TMEM109Q9BVC6 243 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 CCDC134Q9H6E4 229 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 PRDM6Q9NQX0 595 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 PDLIM7Q9NR12 457 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 FAM114A2Q9NRY5 505 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 SAP30BPQ9UHR5 308 aaKnown RBP8.28□□□□□ -1.08
CCDC60-204ENST00000539847 NFU1Q9UMS0 254 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 PHF24Q9UPV7 400 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 ATP11BQ9Y2G3 1177 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 PRUNE2Q8WUY3 3088 aa8.28□□□□□ -1.08
CCDC60-204ENST00000539847 MYO5AQ9Y4I1 1855 aaKnown RBP8.28□□□□□ -1.08
CCDC60-204ENST00000539847 A0A0A6YYK5 440 aaPredicted RBP8.27□□□□□ -1.09
CCDC60-204ENST00000539847 CCDC194A0A1B0GVG4 234 aa8.27□□□□□ -1.09
CCDC60-204ENST00000539847 CCDC189A1A4V9 331 aa8.27□□□□□ -1.09
CCDC60-204ENST00000539847 E7EVH7 732 aa8.27□□□□□ -1.09
CCDC60-204ENST00000539847 PES1O00541 588 aaKnown RBP8.27□□□□□ -1.09
CCDC60-204ENST00000539847 LIN7AO14910 233 aaPredicted RBP8.27□□□□□ -1.09
CCDC60-204ENST00000539847 KIAA0355O15063 1070 aa8.27□□□□□ -1.09
CCDC60-204ENST00000539847 NDUFB5O43674 189 aa8.27□□□□□ -1.09
CCDC60-204ENST00000539847 RTN2O75298 545 aa8.27□□□□□ -1.09
CCDC60-204ENST00000539847 PLEKHA8P1O95397 391 aa8.27□□□□□ -1.09
CCDC60-204ENST00000539847 KRT14P02533 472 aa8.27□□□□□ -1.09
CCDC60-204ENST00000539847 USP11P51784 963 aa8.27□□□□□ -1.09
CCDC60-204ENST00000539847 DYNLL1P63167 89 aaKnown RBP8.27□□□□□ -1.09
CCDC60-204ENST00000539847 IRX1P78414 480 aaPredicted RBP8.27□□□□□ -1.09
CCDC60-204ENST00000539847 SLC7A5Q01650 507 aa8.27□□□□□ -1.09
CCDC60-204ENST00000539847 GUCY1A3Q02108 690 aa8.27□□□□□ -1.09
CCDC60-204ENST00000539847 BYSLQ13895 437 aaKnown RBP8.27□□□□□ -1.09
CCDC60-204ENST00000539847 PDIA5Q14554 519 aa8.27□□□□□ -1.09
CCDC60-204ENST00000539847 LRRC41Q15345 812 aa8.27□□□□□ -1.09
CCDC60-204ENST00000539847 ZKSCAN8Q15776 578 aaPredicted RBP8.27□□□□□ -1.09
CCDC60-204ENST00000539847 SLC18A3Q16572 532 aa8.27□□□□□ -1.09
CCDC60-204ENST00000539847 GJC2Q5T442 439 aaPredicted RBP8.27□□□□□ -1.09
CCDC60-204ENST00000539847 TMEM179Q6ZVK1 233 aa8.27□□□□□ -1.09
CCDC60-204ENST00000539847 SV2BQ7L1I2 683 aa8.27□□□□□ -1.09
CCDC60-204ENST00000539847 KRT25Q7Z3Z0 450 aa8.27□□□□□ -1.09
CCDC60-204ENST00000539847 CABP7Q86V35 215 aa8.27□□□□□ -1.09
CCDC60-204ENST00000539847 APLFQ8IW19 511 aaPredicted RBP8.27□□□□□ -1.09
CCDC60-204ENST00000539847 RASGEF1CQ8N431 466 aa8.27□□□□□ -1.09
CCDC60-204ENST00000539847 CCDC26Q8TAB7 109 aa8.27□□□□□ -1.09
CCDC60-204ENST00000539847 ACER1Q8TDN7 264 aa8.27□□□□□ -1.09
CCDC60-204ENST00000539847 TCP11Q8WWU5 503 aa8.27□□□□□ -1.09
CCDC60-204ENST00000539847 CCT6BQ92526 530 aa8.27□□□□□ -1.09
CCDC60-204ENST00000539847 BADQ92934 168 aa8.27□□□□□ -1.09
CCDC60-204ENST00000539847 TLCD1Q96CP7 247 aa8.27□□□□□ -1.09
CCDC60-204ENST00000539847 TSG101Q99816 390 aa8.27□□□□□ -1.09
CCDC60-204ENST00000539847 PLCD4Q9BRC7 762 aa8.27□□□□□ -1.09
CCDC60-204ENST00000539847 ZKSCAN3Q9BRR0 538 aa8.27□□□□□ -1.09
CCDC60-204ENST00000539847 TSEN34Q9BSV6 310 aaKnown RBP8.27□□□□□ -1.09
CCDC60-204ENST00000539847 FAM129AQ9BZQ8 928 aa8.27□□□□□ -1.09
CCDC60-204ENST00000539847 EBF2Q9HAK2 575 aa8.27□□□□□ -1.09
CCDC60-204ENST00000539847 MLXIPQ9HAP2 919 aa8.27□□□□□ -1.09
CCDC60-204ENST00000539847 CYLDQ9NQC7 956 aa8.27□□□□□ -1.09
CCDC60-204ENST00000539847 ATP8A2Q9NTI2 1148 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms