RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 PTPRJQ12913 1337 aa24.26■■□□□ 1.47
HOMER3-204ENST00000539827 MAGEB2O15479 319 aa24.26■■□□□ 1.47
HOMER3-204ENST00000539827 TADA3O75528 432 aa24.26■■□□□ 1.47
HOMER3-204ENST00000539827 TOM1L1O75674 476 aa24.26■■□□□ 1.47
HOMER3-204ENST00000539827 CCDC172P0C7W6 258 aa24.26■■□□□ 1.47
HOMER3-204ENST00000539827 BMS1Q14692 1282 aaKnown RBP24.26■■□□□ 1.47
HOMER3-204ENST00000539827 KIF22Q14807 665 aa24.26■■□□□ 1.47
HOMER3-204ENST00000539827 DGKDQ16760 1214 aa24.26■■□□□ 1.47
HOMER3-204ENST00000539827 TRIM58Q8NG06 486 aa24.26■■□□□ 1.47
HOMER3-204ENST00000539827 USP6NLQ92738 828 aa24.26■■□□□ 1.47
HOMER3-204ENST00000539827 VTI1AQ96AJ9 217 aa24.26■■□□□ 1.47
HOMER3-204ENST00000539827 MINDY3Q9H8M7 445 aa24.26■■□□□ 1.47
HOMER3-204ENST00000539827 TNFSF9P41273 254 aa24.25■■□□□ 1.47
HOMER3-204ENST00000539827 PTENP60484 403 aa24.25■■□□□ 1.47
HOMER3-204ENST00000539827 CLDN10P78369 228 aa24.25■■□□□ 1.47
HOMER3-204ENST00000539827 GRM1Q13255 1194 aa24.25■■□□□ 1.47
HOMER3-204ENST00000539827 CRHR2Q13324 411 aa24.25■■□□□ 1.47
HOMER3-204ENST00000539827 TUBB2AQ13885 445 aa24.25■■□□□ 1.47
HOMER3-204ENST00000539827 C10orf76Q5T2E6 689 aa24.25■■□□□ 1.47
HOMER3-204ENST00000539827 MTHFD1LQ6UB35 978 aa24.25■■□□□ 1.47
HOMER3-204ENST00000539827 C15orf39Q6ZRI6 1047 aa24.25■■□□□ 1.47
HOMER3-204ENST00000539827 FMNL3Q8IVF7 1028 aa24.25■■□□□ 1.47
HOMER3-204ENST00000539827 GLYCTKQ8IVS8 523 aa24.25■■□□□ 1.47
HOMER3-204ENST00000539827 LINC01465Q8N7H1 131 aa24.25■■□□□ 1.47
HOMER3-204ENST00000539827 HELQQ8TDG4 1101 aa24.25■■□□□ 1.47
HOMER3-204ENST00000539827 LENG1Q96BZ8 264 aaPredicted RBP24.25■■□□□ 1.47
HOMER3-204ENST00000539827 TUBB2BQ9BVA1 445 aa24.25■■□□□ 1.47
HOMER3-204ENST00000539827 PUF60Q9UHX1 559 aaKnown RBP24.25■■□□□ 1.47
HOMER3-204ENST00000539827 AKT3Q9Y243 479 aa24.25■■□□□ 1.47
HOMER3-204ENST00000539827 COL1A2P08123 1366 aa24.25■■□□□ 1.47
HOMER3-204ENST00000539827 B4GALT5O43286 388 aa24.25■■□□□ 1.47
HOMER3-204ENST00000539827 C4BPAP04003 597 aaKnown RBP24.25■■□□□ 1.47
HOMER3-204ENST00000539827 HOXC6P09630 235 aa24.25■■□□□ 1.47
HOMER3-204ENST00000539827 HOXD8P13378 290 aaPredicted RBP24.25■■□□□ 1.47
HOMER3-204ENST00000539827 MFAP3P55082 362 aa24.25■■□□□ 1.47
HOMER3-204ENST00000539827 CHMP4BP1P59074 171 aa24.25■■□□□ 1.47
HOMER3-204ENST00000539827 PPFIA1Q13136 1202 aa24.25■■□□□ 1.47
HOMER3-204ENST00000539827 HSP90AA2PQ14568 343 aaPredicted RBP24.25■■□□□ 1.47
HOMER3-204ENST00000539827 TRAPPC11Q7Z392 1133 aa24.25■■□□□ 1.47
HOMER3-204ENST00000539827 SLC30A5Q8TAD4 765 aa24.25■■□□□ 1.47
HOMER3-204ENST00000539827 ANKRD7Q92527 254 aa24.25■■□□□ 1.47
HOMER3-204ENST00000539827 SYT11Q9BT88 431 aa24.25■■□□□ 1.47
HOMER3-204ENST00000539827 FZD8Q9H461 694 aa24.25■■□□□ 1.47
HOMER3-204ENST00000539827 ZNF865P0CJ78 1059 aaPredicted RBP24.24■■□□□ 1.47
HOMER3-204ENST00000539827 TNFAIP3P21580 790 aa24.24■■□□□ 1.47
HOMER3-204ENST00000539827 MBTD1Q05BQ5 628 aa24.24■■□□□ 1.47
HOMER3-204ENST00000539827 GRIK4Q16099 956 aa24.24■■□□□ 1.47
HOMER3-204ENST00000539827 TMEM132AQ24JP5 1023 aa24.24■■□□□ 1.47
HOMER3-204ENST00000539827 TDRD10Q5VZ19 366 aaKnown RBP24.24■■□□□ 1.47
HOMER3-204ENST00000539827 PAPD7Q5XG87 772 aaKnown RBP24.24■■□□□ 1.47
HOMER3-204ENST00000539827 CDR2LQ86X02 465 aaPredicted RBP24.24■■□□□ 1.47
HOMER3-204ENST00000539827 NOX5Q96PH1 765 aa24.24■■□□□ 1.47
HOMER3-204ENST00000539827 ALS2CR12Q96Q35 445 aa24.24■■□□□ 1.47
HOMER3-204ENST00000539827 CGRRF1Q99675 332 aa24.24■■□□□ 1.47
HOMER3-204ENST00000539827 CNTNAP2Q9UHC6 1331 aa24.24■■□□□ 1.47
HOMER3-204ENST00000539827 FAM170AA1A519 330 aa24.23■■□□□ 1.47
HOMER3-204ENST00000539827 ACKR2O00590 384 aa24.23■■□□□ 1.47
HOMER3-204ENST00000539827 ABLIM1O14639 778 aa24.23■■□□□ 1.47
HOMER3-204ENST00000539827 SRGAP2O75044 1071 aa24.23■■□□□ 1.47
HOMER3-204ENST00000539827 HLA-DRAP01903 254 aa24.23■■□□□ 1.47
HOMER3-204ENST00000539827 VTNP04004 478 aa24.23■■□□□ 1.47
HOMER3-204ENST00000539827 IRX5P78411 483 aaPredicted RBP24.23■■□□□ 1.47
HOMER3-204ENST00000539827 BIRC3Q13489 604 aa24.23■■□□□ 1.47
HOMER3-204ENST00000539827 PRPF4BQ13523 1007 aaKnown RBP24.23■■□□□ 1.47
HOMER3-204ENST00000539827 OLFML2BQ68BL8 750 aa24.23■■□□□ 1.47
HOMER3-204ENST00000539827 RNF10Q8N5U6 811 aaKnown RBP24.23■■□□□ 1.47
HOMER3-204ENST00000539827 PPP1R13LQ8WUF5 828 aa24.23■■□□□ 1.47
HOMER3-204ENST00000539827 SLC20A1Q8WUM9 679 aa24.23■■□□□ 1.47
HOMER3-204ENST00000539827 CCDC102AQ96A19 550 aa24.23■■□□□ 1.47
HOMER3-204ENST00000539827 SEPT11Q9NVA2 429 aaKnown RBP24.23■■□□□ 1.47
HOMER3-204ENST00000539827 GNEQ9Y223 722 aaKnown RBP24.23■■□□□ 1.47
HOMER3-204ENST00000539827 A0A087WZ62 844 aa24.23■■□□□ 1.47
HOMER3-204ENST00000539827 TMCO5BA8MYB1 307 aa24.23■■□□□ 1.47
HOMER3-204ENST00000539827 CSDE1O75534 798 aaKnown RBP24.23■■□□□ 1.47
HOMER3-204ENST00000539827 RGS2P41220 211 aa24.23■■□□□ 1.47
HOMER3-204ENST00000539827 SREBF2Q12772 1141 aa24.23■■□□□ 1.47
HOMER3-204ENST00000539827 ZACNQ401N2 412 aa24.23■■□□□ 1.47
HOMER3-204ENST00000539827 ATF7IP2Q5U623 682 aa24.23■■□□□ 1.47
HOMER3-204ENST00000539827 EEF1DP3Q658K8 133 aa24.23■■□□□ 1.47
HOMER3-204ENST00000539827 AGPAT1Q99943 283 aa24.23■■□□□ 1.47
HOMER3-204ENST00000539827 FDXACB1Q9BRP7 624 aaPredicted RBP24.23■■□□□ 1.47
HOMER3-204ENST00000539827 GJD2Q9UKL4 321 aa24.23■■□□□ 1.47
HOMER3-204ENST00000539827 MYH10P35580 1976 aa24.23■■□□□ 1.47
HOMER3-204ENST00000539827 ANO9A1A5B4 782 aa24.22■■□□□ 1.47
HOMER3-204ENST00000539827 TNPO2O14787 897 aaKnown RBP24.22■■□□□ 1.47
HOMER3-204ENST00000539827 FAM189A1O60320 539 aa24.22■■□□□ 1.47
HOMER3-204ENST00000539827 SGPL1O95470 568 aa24.22■■□□□ 1.47
HOMER3-204ENST00000539827 MCL1Q07820 350 aa24.22■■□□□ 1.47
HOMER3-204ENST00000539827 SRGAP1Q7Z6B7 1085 aa24.22■■□□□ 1.47
HOMER3-204ENST00000539827 BRSK2Q8IWQ3 736 aa24.22■■□□□ 1.47
HOMER3-204ENST00000539827 UBXN4Q92575 508 aa24.22■■□□□ 1.47
HOMER3-204ENST00000539827 IFT122Q9HBG6 1241 aa24.22■■□□□ 1.47
HOMER3-204ENST00000539827 SAR1BQ9Y6B6 198 aa24.22■■□□□ 1.47
HOMER3-204ENST00000539827 EFCAB8A8MWE9 144 aa24.22■■□□□ 1.47
HOMER3-204ENST00000539827 OGTO15294 1046 aa24.22■■□□□ 1.47
HOMER3-204ENST00000539827 VNN1O95497 513 aa24.22■■□□□ 1.47
HOMER3-204ENST00000539827 H2AFZP0C0S5 128 aa24.22■■□□□ 1.47
HOMER3-204ENST00000539827 IQCF3P0C7M6 154 aa24.22■■□□□ 1.47
HOMER3-204ENST00000539827 CTGFP29279 349 aa24.22■■□□□ 1.47
HOMER3-204ENST00000539827 PIK3CAP42336 1068 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms