RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 CKBP12277 381 aa17.54■□□□□ 0.4
TRAF3-204ENST00000539721 ATN1P54259 1190 aaPredicted RBP17.54■□□□□ 0.4
TRAF3-204ENST00000539721 MYL7Q01449 175 aa17.54■□□□□ 0.4
TRAF3-204ENST00000539721 KCNMA1Q12791 1236 aa17.54■□□□□ 0.4
TRAF3-204ENST00000539721 TBX2Q13207 712 aaPredicted RBP17.54■□□□□ 0.4
TRAF3-204ENST00000539721 TRIM14Q14142 442 aa17.54■□□□□ 0.4
TRAF3-204ENST00000539721 KYAT1Q16773 422 aa17.54■□□□□ 0.4
TRAF3-204ENST00000539721 ANKLE1Q8NAG6 615 aa17.54■□□□□ 0.4
TRAF3-204ENST00000539721 CRACR2AQ9BSW2 395 aa17.54■□□□□ 0.4
TRAF3-204ENST00000539721 PDE11AQ9HCR9 933 aa17.54■□□□□ 0.4
TRAF3-204ENST00000539721 PRDM10Q9NQV6 1147 aa17.54■□□□□ 0.4
TRAF3-204ENST00000539721 ANK1P16157 1881 aa17.54■□□□□ 0.4
TRAF3-204ENST00000539721 TLR3O15455 904 aaKnown RBP17.53■□□□□ 0.4
TRAF3-204ENST00000539721 TPM1P09493 284 aa17.53■□□□□ 0.4
TRAF3-204ENST00000539721 GCLMP48507 274 aa17.53■□□□□ 0.4
TRAF3-204ENST00000539721 GSDMDP57764 484 aa17.53■□□□□ 0.4
TRAF3-204ENST00000539721 PPP3CAQ08209 521 aa17.53■□□□□ 0.4
TRAF3-204ENST00000539721 CBWD6Q4V339 395 aa17.53■□□□□ 0.4
TRAF3-204ENST00000539721 CBWD3Q5JTY5 395 aa17.53■□□□□ 0.4
TRAF3-204ENST00000539721 FBXO47Q5MNV8 452 aa17.53■□□□□ 0.4
TRAF3-204ENST00000539721 CBWD5Q5RIA9 395 aa17.53■□□□□ 0.4
TRAF3-204ENST00000539721 SLC39A5Q6ZMH5 540 aa17.53■□□□□ 0.4
TRAF3-204ENST00000539721 GBP6Q6ZN66 633 aa17.53■□□□□ 0.4
TRAF3-204ENST00000539721 DIS3LQ8TF46 1054 aaKnown RBP17.53■□□□□ 0.4
TRAF3-204ENST00000539721 TRIM44Q96DX7 344 aaPredicted RBP17.53■□□□□ 0.4
TRAF3-204ENST00000539721 FAM212AQ96EL1 285 aa17.53■□□□□ 0.4
TRAF3-204ENST00000539721 POP1Q99575 1024 aaKnown RBP17.53■□□□□ 0.4
TRAF3-204ENST00000539721 TMEM106CQ9BVX2 250 aa17.53■□□□□ 0.4
TRAF3-204ENST00000539721 RPF1Q9H9Y2 349 aaKnown RBP17.53■□□□□ 0.4
TRAF3-204ENST00000539721 ST3GAL5Q9UNP4 418 aa17.53■□□□□ 0.4
TRAF3-204ENST00000539721 GTPBP10A4D1E9 387 aaKnown RBP17.53■□□□□ 0.4
TRAF3-204ENST00000539721 GPR182O15218 404 aa17.53■□□□□ 0.4
TRAF3-204ENST00000539721 PQBP1O60828 265 aaKnown RBP17.53■□□□□ 0.4
TRAF3-204ENST00000539721 CD4P01730 458 aa17.53■□□□□ 0.4
TRAF3-204ENST00000539721 CLTAP09496 248 aa17.53■□□□□ 0.4
TRAF3-204ENST00000539721 STAG3L1P0CL83 205 aa17.53■□□□□ 0.4
TRAF3-204ENST00000539721 GHRP10912 638 aa17.53■□□□□ 0.4
TRAF3-204ENST00000539721 TNNI1P19237 187 aa17.53■□□□□ 0.4
TRAF3-204ENST00000539721 TRIM21P19474 475 aaKnown RBP17.53■□□□□ 0.4
TRAF3-204ENST00000539721 MXI1P50539 228 aa17.53■□□□□ 0.4
TRAF3-204ENST00000539721 WNT7BP56706 349 aa17.53■□□□□ 0.4
TRAF3-204ENST00000539721 NFX1Q12986 1120 aaKnown RBP17.53■□□□□ 0.4
TRAF3-204ENST00000539721 EXOC3L4Q17RC7 722 aa17.53■□□□□ 0.4
TRAF3-204ENST00000539721 NEK11Q8NG66 645 aa17.53■□□□□ 0.4
TRAF3-204ENST00000539721 CAGE1Q8TC20 777 aa17.53■□□□□ 0.4
TRAF3-204ENST00000539721 CPLX3Q8WVH0 158 aa17.53■□□□□ 0.4
TRAF3-204ENST00000539721 CCDC51Q96ER9 411 aa17.53■□□□□ 0.4
TRAF3-204ENST00000539721 CGRRF1Q99675 332 aa17.53■□□□□ 0.4
TRAF3-204ENST00000539721 NUP58Q9BVL2 599 aa17.53■□□□□ 0.4
TRAF3-204ENST00000539721 LSM14BQ9BX40 385 aaKnown RBP17.53■□□□□ 0.4
TRAF3-204ENST00000539721 EIF2AQ9BY44 585 aaKnown RBP17.53■□□□□ 0.4
TRAF3-204ENST00000539721 TRIM6Q9C030 488 aaPredicted RBP17.53■□□□□ 0.4
TRAF3-204ENST00000539721 TOPORSQ9NS56 1045 aaPredicted RBP17.53■□□□□ 0.4
TRAF3-204ENST00000539721 GCNT4Q9P109 453 aa17.53■□□□□ 0.4
TRAF3-204ENST00000539721 GYPCP04921 128 aa17.52■□□□□ 0.4
TRAF3-204ENST00000539721 GTF2H1P32780 548 aa17.52■□□□□ 0.4
TRAF3-204ENST00000539721 RBL2Q08999 1139 aa17.52■□□□□ 0.4
TRAF3-204ENST00000539721 CETN1Q12798 172 aa17.52■□□□□ 0.4
TRAF3-204ENST00000539721 SURF1Q15526 300 aa17.52■□□□□ 0.4
TRAF3-204ENST00000539721 ENOX2Q16206 610 aaKnown RBP17.52■□□□□ 0.4
TRAF3-204ENST00000539721 TMEM192Q8IY95 271 aa17.52■□□□□ 0.4
TRAF3-204ENST00000539721 TMEM8AQ9HCN3 771 aa17.52■□□□□ 0.4
TRAF3-204ENST00000539721 FAM207AQ9NSI2 230 aaPredicted RBP17.52■□□□□ 0.4
TRAF3-204ENST00000539721 DNAH12Q6ZR08 3092 aa17.52■□□□□ 0.4
TRAF3-204ENST00000539721 P4HA2O15460 535 aa17.51■□□□□ 0.39
TRAF3-204ENST00000539721 CXCL8P10145 99 aa17.51■□□□□ 0.39
TRAF3-204ENST00000539721 COL6A1P12109 1028 aa17.51■□□□□ 0.39
TRAF3-204ENST00000539721 CD52P31358 61 aa17.51■□□□□ 0.39
TRAF3-204ENST00000539721 CASP14P31944 242 aa17.51■□□□□ 0.39
TRAF3-204ENST00000539721 GRM5P41594 1212 aa17.51■□□□□ 0.39
TRAF3-204ENST00000539721 PAK2Q13177 524 aa17.51■□□□□ 0.39
TRAF3-204ENST00000539721 BFSP2Q13515 415 aa17.51■□□□□ 0.39
TRAF3-204ENST00000539721 LPIN1Q14693 890 aa17.51■□□□□ 0.39
TRAF3-204ENST00000539721 LMBRD2Q68DH5 695 aaPredicted RBP17.51■□□□□ 0.39
TRAF3-204ENST00000539721 KRT39Q6A163 491 aa17.51■□□□□ 0.39
TRAF3-204ENST00000539721 TWF2Q6IBS0 349 aaKnown RBP17.51■□□□□ 0.39
TRAF3-204ENST00000539721 CCDC150Q8NCX0 1101 aa17.51■□□□□ 0.39
TRAF3-204ENST00000539721 IQCDQ96DY2 449 aa17.51■□□□□ 0.39
TRAF3-204ENST00000539721 CCDC94Q9BW85 323 aaPredicted RBP17.51■□□□□ 0.39
TRAF3-204ENST00000539721 MCOLN1Q9GZU1 580 aa17.51■□□□□ 0.39
TRAF3-204ENST00000539721 TMEM117Q9H0C3 514 aa17.51■□□□□ 0.39
TRAF3-204ENST00000539721 AGO3Q9H9G7 860 aaKnown RBP17.51■□□□□ 0.39
TRAF3-204ENST00000539721 ERVK-5Q9HDB9 667 aa17.51■□□□□ 0.39
TRAF3-204ENST00000539721 CITO14578 2027 aa17.51■□□□□ 0.39
TRAF3-204ENST00000539721 RALGAPA2Q2PPJ7 1873 aa17.51■□□□□ 0.39
TRAF3-204ENST00000539721 AKR1B15C9JRZ8 316 aaPredicted RBP17.51■□□□□ 0.39
TRAF3-204ENST00000539721 RBAK-RBAKDNI3L0D1 243 aa17.51■□□□□ 0.39
TRAF3-204ENST00000539721 IL18RAPO95256 599 aa17.51■□□□□ 0.39
TRAF3-204ENST00000539721 SLC9A1P19634 815 aa17.51■□□□□ 0.39
TRAF3-204ENST00000539721 CLDN10P78369 228 aa17.51■□□□□ 0.39
TRAF3-204ENST00000539721 POU5F1Q01860 360 aaKnown RBP17.51■□□□□ 0.39
TRAF3-204ENST00000539721 GOLGA8FQ08AF8 430 aa17.51■□□□□ 0.39
TRAF3-204ENST00000539721 GOLGA8DPQ0D2H9 430 aa17.51■□□□□ 0.39
TRAF3-204ENST00000539721 ARID5BQ14865 1188 aa17.51■□□□□ 0.39
TRAF3-204ENST00000539721 USP38Q8NB14 1042 aa17.51■□□□□ 0.39
TRAF3-204ENST00000539721 ACAP3Q96P50 834 aa17.51■□□□□ 0.39
TRAF3-204ENST00000539721 OSBPL7Q9BZF2 842 aa17.51■□□□□ 0.39
TRAF3-204ENST00000539721 C11orf49Q9H6J7 331 aa17.51■□□□□ 0.39
TRAF3-204ENST00000539721 PADI3Q9ULW8 664 aa17.51■□□□□ 0.39
TRAF3-204ENST00000539721 SQORQ9Y6N5 450 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms