RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 ZBTB33Q86T24 672 aa10□□□□□ -0.81
RTN4IP1-204ENST00000539449 RNF180Q86T96 592 aa10□□□□□ -0.81
RTN4IP1-204ENST00000539449 XXYLT1Q8NBI6 393 aa10□□□□□ -0.81
RTN4IP1-204ENST00000539449 PCSK9Q8NBP7 692 aaKnown RBP10□□□□□ -0.81
RTN4IP1-204ENST00000539449 ANKRD20A12PQ8NF67 263 aa10□□□□□ -0.81
RTN4IP1-204ENST00000539449 TMEM174Q8WUU8 243 aa10□□□□□ -0.81
RTN4IP1-204ENST00000539449 TMEM40Q8WWA1 233 aa10□□□□□ -0.81
RTN4IP1-204ENST00000539449 NLRP7Q8WX94 980 aa10□□□□□ -0.81
RTN4IP1-204ENST00000539449 POMGNT1Q8WZA1 660 aa10□□□□□ -0.81
RTN4IP1-204ENST00000539449 VTI1AQ96AJ9 217 aa10□□□□□ -0.81
RTN4IP1-204ENST00000539449 CPB2Q96IY4 423 aa10□□□□□ -0.81
RTN4IP1-204ENST00000539449 MAP7D2Q96T17 732 aa10□□□□□ -0.81
RTN4IP1-204ENST00000539449 MKNK1Q9BUB5 465 aa10□□□□□ -0.81
RTN4IP1-204ENST00000539449 INO80BQ9C086 356 aaPredicted RBP10□□□□□ -0.81
RTN4IP1-204ENST00000539449 C2orf40Q9H1Z8 148 aa10□□□□□ -0.81
RTN4IP1-204ENST00000539449 CGNQ9P2M7 1197 aaKnown RBP10□□□□□ -0.81
RTN4IP1-204ENST00000539449 ARMCX3Q9UH62 379 aaPredicted RBP10□□□□□ -0.81
RTN4IP1-204ENST00000539449 A0A0B4J269 797 aa9.99□□□□□ -0.81
RTN4IP1-204ENST00000539449 A0A1W2PQ45 241 aaPredicted RBP9.99□□□□□ -0.81
RTN4IP1-204ENST00000539449 A0A1W2PQY0 241 aa9.99□□□□□ -0.81
RTN4IP1-204ENST00000539449 GRXCR1A8MXD5 290 aa9.99□□□□□ -0.81
RTN4IP1-204ENST00000539449 PRR33A8MZF0 331 aa9.99□□□□□ -0.81
RTN4IP1-204ENST00000539449 HARSP12081 509 aaKnown RBP9.99□□□□□ -0.81
RTN4IP1-204ENST00000539449 GARTP22102 1010 aa9.99□□□□□ -0.81
RTN4IP1-204ENST00000539449 PROZP22891 400 aa9.99□□□□□ -0.81
RTN4IP1-204ENST00000539449 ACOT2P49753 483 aa9.99□□□□□ -0.81
RTN4IP1-204ENST00000539449 SNRPFP62306 86 aaKnown RBP9.99□□□□□ -0.81
RTN4IP1-204ENST00000539449 APBA1Q02410 837 aa9.99□□□□□ -0.81
RTN4IP1-204ENST00000539449 FPGSQ05932 587 aa9.99□□□□□ -0.81
RTN4IP1-204ENST00000539449 KCNH2Q12809 1159 aa9.99□□□□□ -0.81
RTN4IP1-204ENST00000539449 SYCP1Q15431 976 aa9.99□□□□□ -0.81
RTN4IP1-204ENST00000539449 MAPK6Q16659 721 aa9.99□□□□□ -0.81
RTN4IP1-204ENST00000539449 DPY19L2P1Q6NXN4 242 aa9.99□□□□□ -0.81
RTN4IP1-204ENST00000539449 ZPBP2Q6X784 338 aa9.99□□□□□ -0.81
RTN4IP1-204ENST00000539449 SESTD1Q86VW0 696 aa9.99□□□□□ -0.81
RTN4IP1-204ENST00000539449 GPD1LQ8N335 351 aa9.99□□□□□ -0.81
RTN4IP1-204ENST00000539449 CACTINQ8WUQ7 758 aaKnown RBP9.99□□□□□ -0.81
RTN4IP1-204ENST00000539449 DHX38Q92620 1227 aaKnown RBP9.99□□□□□ -0.81
RTN4IP1-204ENST00000539449 SLC35C1Q96A29 364 aa9.99□□□□□ -0.81
RTN4IP1-204ENST00000539449 FBXL18Q96ME1 805 aa9.99□□□□□ -0.81
RTN4IP1-204ENST00000539449 OSMRQ99650 979 aa9.99□□□□□ -0.81
RTN4IP1-204ENST00000539449 FAM213AQ9BRX8 229 aa9.99□□□□□ -0.81
RTN4IP1-204ENST00000539449 TSEN34Q9BSV6 310 aaKnown RBP9.99□□□□□ -0.81
RTN4IP1-204ENST00000539449 MRPL4Q9BYD3 311 aaKnown RBP9.99□□□□□ -0.81
RTN4IP1-204ENST00000539449 NFKBIZQ9BYH8 718 aa9.99□□□□□ -0.81
RTN4IP1-204ENST00000539449 KCNF1Q9H3M0 494 aa9.99□□□□□ -0.81
RTN4IP1-204ENST00000539449 PTPRHQ9HD43 1115 aa9.99□□□□□ -0.81
RTN4IP1-204ENST00000539449 TRMT13Q9NUP7 481 aaKnown RBP9.99□□□□□ -0.81
RTN4IP1-204ENST00000539449 ANKFY1Q9P2R3 1169 aa9.99□□□□□ -0.81
RTN4IP1-204ENST00000539449 PHF24Q9UPV7 400 aa9.99□□□□□ -0.81
RTN4IP1-204ENST00000539449 GINS2Q9Y248 185 aa9.99□□□□□ -0.81
RTN4IP1-204ENST00000539449 SIK3Q9Y2K2 1263 aa9.99□□□□□ -0.81
RTN4IP1-204ENST00000539449 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.99□□□□□ -0.81
RTN4IP1-204ENST00000539449 GBF1Q92538 1859 aa9.99□□□□□ -0.81
RTN4IP1-204ENST00000539449 CHD7Q9P2D1 2997 aa9.99□□□□□ -0.81
RTN4IP1-204ENST00000539449 KBTBD13C9JR72 458 aa9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 EPHB6O15197 1021 aa9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 MEFVO15553 781 aaPredicted RBP9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 EXTL3O43909 919 aa9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 FAM189A1O60320 539 aa9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 TSPAN1O60635 241 aa9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 LRRN2O75325 713 aa9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 PTMAP06454 111 aaKnown RBP9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 GNAT1P11488 350 aa9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 DARSP14868 501 aaKnown RBP9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 ARF4P18085 180 aaPredicted RBP9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 TNFSF9P41273 254 aa9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 MCCD1P59942 119 aaPredicted RBP9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 FOXK2Q01167 660 aa9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 TLE2Q04725 743 aa9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 PPP3CAQ08209 521 aa9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 RBL2Q08999 1139 aa9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 LRMPQ12912 555 aa9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 PRPF4BQ13523 1007 aaKnown RBP9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 FAM187BQ17R55 369 aa9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 TRIM71Q2Q1W2 868 aaKnown RBP9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 DCAF17Q5H9S7 520 aaPredicted RBP9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 ATF7IP2Q5U623 682 aa9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 TCERG1LQ5VWI1 586 aa9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 SCARA3Q6AZY7 606 aa9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 TSHZ1Q6ZSZ6 1077 aa9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 SRGAP1Q7Z6B7 1085 aa9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 SERINC5Q86VE9 423 aa9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 ZNF410Q86VK4 478 aa9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 MICALL1Q8N3F8 863 aa9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 TMEM130Q8N3G9 435 aa9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 CEP120Q8N960 986 aa9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 SLC43A3Q8NBI5 491 aa9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 ARRDC4Q8NCT1 418 aa9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 CPLX3Q8WVH0 158 aa9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 MFSD14AQ96MC6 490 aa9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 SCLT1Q96NL6 688 aa9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 ERGIC2Q96RQ1 377 aa9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 POP1Q99575 1024 aaKnown RBP9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 CRACR2AQ9BSW2 395 aa9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 MSTO1Q9BUK6 570 aa9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 TRPV6Q9H1D0 765 aa9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 CDT1Q9H211 546 aa9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 PDZD7Q9H5P4 517 aa9.98□□□□□ -0.81
RTN4IP1-204ENST00000539449 MMRN2Q9H8L6 949 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms