RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 UNC13DQ70J99 1090 aa17.25■□□□□ 0.35
RPAIN-206ENST00000539417 SPPL3Q8TCT6 385 aa17.25■□□□□ 0.35
RPAIN-206ENST00000539417 RABGGTAQ92696 567 aa17.25■□□□□ 0.35
RPAIN-206ENST00000539417 GAS2L1Q99501 681 aaPredicted RBP17.25■□□□□ 0.35
RPAIN-206ENST00000539417 TCHPQ9BT92 498 aa17.25■□□□□ 0.35
RPAIN-206ENST00000539417 LRRC27Q9C0I9 530 aa17.25■□□□□ 0.35
RPAIN-206ENST00000539417 STXBP5LQ9Y2K9 1186 aa17.25■□□□□ 0.35
RPAIN-206ENST00000539417 SPTBN5Q9NRC6 3674 aaKnown RBP17.25■□□□□ 0.35
RPAIN-206ENST00000539417 XIRP2A4UGR9 3374 aa17.25■□□□□ 0.35
RPAIN-206ENST00000539417 HNRNPDLO14979 420 aaKnown RBP17.24■□□□□ 0.35
RPAIN-206ENST00000539417 FAM189A1O60320 539 aa17.24■□□□□ 0.35
RPAIN-206ENST00000539417 RB1P06400 928 aa17.24■□□□□ 0.35
RPAIN-206ENST00000539417 MCF2P10911 925 aa17.24■□□□□ 0.35
RPAIN-206ENST00000539417 TNFSF9P41273 254 aa17.24■□□□□ 0.35
RPAIN-206ENST00000539417 GRM5P41594 1212 aa17.24■□□□□ 0.35
RPAIN-206ENST00000539417 LIG4P49917 911 aa17.24■□□□□ 0.35
RPAIN-206ENST00000539417 MCL1Q07820 350 aa17.24■□□□□ 0.35
RPAIN-206ENST00000539417 NOLC1Q14978 699 aaKnown RBP eCLIP17.24■□□□□ 0.35
RPAIN-206ENST00000539417 ZSWIM2Q8NEG5 633 aa17.24■□□□□ 0.35
RPAIN-206ENST00000539417 PYM1Q9BRP8 204 aaKnown RBP17.24■□□□□ 0.35
RPAIN-206ENST00000539417 UBN1Q9NPG3 1134 aa17.24■□□□□ 0.35
RPAIN-206ENST00000539417 PCDHGC5Q9Y5F6 944 aa17.24■□□□□ 0.35
RPAIN-206ENST00000539417 TRIP11Q15643 1979 aa17.24■□□□□ 0.35
RPAIN-206ENST00000539417 TDRD15B5MCY1 1934 aaKnown RBP17.24■□□□□ 0.35
RPAIN-206ENST00000539417 PRRC2BQ5JSZ5 2229 aaKnown RBP17.24■□□□□ 0.35
RPAIN-206ENST00000539417 NR1I2O75469 434 aa17.24■□□□□ 0.35
RPAIN-206ENST00000539417 GALTP07902 379 aa17.24■□□□□ 0.35
RPAIN-206ENST00000539417 LAG3P18627 525 aa17.24■□□□□ 0.35
RPAIN-206ENST00000539417 IGFBP6P24592 240 aaPredicted RBP17.24■□□□□ 0.35
RPAIN-206ENST00000539417 ADSSP30520 456 aa17.24■□□□□ 0.35
RPAIN-206ENST00000539417 IRS1P35568 1242 aa17.24■□□□□ 0.35
RPAIN-206ENST00000539417 RNASELQ05823 741 aaKnown RBP17.24■□□□□ 0.35
RPAIN-206ENST00000539417 CCDC85BQ15834 202 aaPredicted RBP17.24■□□□□ 0.35
RPAIN-206ENST00000539417 KMT5BQ4FZB7 885 aa17.24■□□□□ 0.35
RPAIN-206ENST00000539417 GLRA4Q5JXX5 417 aa17.24■□□□□ 0.35
RPAIN-206ENST00000539417 L1TD1Q5T7N2 865 aaKnown RBP17.24■□□□□ 0.35
RPAIN-206ENST00000539417 EPM2AIP1Q7L775 607 aaPredicted RBP17.24■□□□□ 0.35
RPAIN-206ENST00000539417 COLGALT2Q8IYK4 626 aa17.24■□□□□ 0.35
RPAIN-206ENST00000539417 SLC39A11Q8N1S5 342 aa17.24■□□□□ 0.35
RPAIN-206ENST00000539417 MICALL1Q8N3F8 863 aa17.24■□□□□ 0.35
RPAIN-206ENST00000539417 URGCPQ8TCY9 931 aa17.24■□□□□ 0.35
RPAIN-206ENST00000539417 PPM1EQ8WY54 764 aa17.24■□□□□ 0.35
RPAIN-206ENST00000539417 P2RX5Q93086 422 aa17.24■□□□□ 0.35
RPAIN-206ENST00000539417 ZNF558Q96NG5 402 aa17.24■□□□□ 0.35
RPAIN-206ENST00000539417 PAAF1Q9BRP4 392 aa17.24■□□□□ 0.35
RPAIN-206ENST00000539417 PLVAPQ9BX97 442 aa17.24■□□□□ 0.35
RPAIN-206ENST00000539417 MRPL9Q9BYD2 267 aaKnown RBP17.24■□□□□ 0.35
RPAIN-206ENST00000539417 SLC39A2Q9NP94 309 aa17.24■□□□□ 0.35
RPAIN-206ENST00000539417 USP25Q9UHP3 1055 aa17.24■□□□□ 0.35
RPAIN-206ENST00000539417 ZMYM2Q9UBW7 1377 aa17.23■□□□□ 0.35
RPAIN-206ENST00000539417 A0A0B4J269 797 aa17.23■□□□□ 0.35
RPAIN-206ENST00000539417 GOLGA6L4A6NEF3 574 aa17.23■□□□□ 0.35
RPAIN-206ENST00000539417 CLDN3O15551 220 aa17.23■□□□□ 0.35
RPAIN-206ENST00000539417 GTPBP6O43824 516 aaPredicted RBP17.23■□□□□ 0.35
RPAIN-206ENST00000539417 FGF18O76093 207 aa17.23■□□□□ 0.35
RPAIN-206ENST00000539417 SLC34A2O95436 690 aa17.23■□□□□ 0.35
RPAIN-206ENST00000539417 POU3F3P20264 500 aaPredicted RBP17.23■□□□□ 0.35
RPAIN-206ENST00000539417 MATR3P43243 847 aaKnown RBP eCLIP17.23■□□□□ 0.35
RPAIN-206ENST00000539417 DSC1Q08554 894 aa17.23■□□□□ 0.35
RPAIN-206ENST00000539417 NAB2Q15742 525 aa17.23■□□□□ 0.35
RPAIN-206ENST00000539417 FAM26FQ5R3K3 315 aa17.23■□□□□ 0.35
RPAIN-206ENST00000539417 ALKAL1Q6UXT8 129 aa17.23■□□□□ 0.35
RPAIN-206ENST00000539417 HACE1Q8IYU2 909 aa17.23■□□□□ 0.35
RPAIN-206ENST00000539417 TMEM87AQ8NBN3 555 aa17.23■□□□□ 0.35
RPAIN-206ENST00000539417 ERCC4Q92889 916 aaPredicted RBP17.23■□□□□ 0.35
RPAIN-206ENST00000539417 ZMAT2Q96NC0 199 aaKnown RBP17.23■□□□□ 0.35
RPAIN-206ENST00000539417 C11orf84Q9BUA3 381 aaPredicted RBP17.23■□□□□ 0.35
RPAIN-206ENST00000539417 VN1R3Q9BXE9 311 aa17.23■□□□□ 0.35
RPAIN-206ENST00000539417 RWDD3Q9Y3V2 267 aa17.23■□□□□ 0.35
RPAIN-206ENST00000539417 PCDHB12Q9Y5F1 795 aa17.23■□□□□ 0.35
RPAIN-206ENST00000539417 PVALEFA0A1B0GWK0 134 aa17.22■□□□□ 0.35
RPAIN-206ENST00000539417 DPYDQ12882 1025 aa17.22■□□□□ 0.35
RPAIN-206ENST00000539417 STK4Q13043 487 aa17.22■□□□□ 0.35
RPAIN-206ENST00000539417 SLC10A6Q3KNW5 377 aa17.22■□□□□ 0.35
RPAIN-206ENST00000539417 SCFD1Q8WVM8 642 aa17.22■□□□□ 0.35
RPAIN-206ENST00000539417 POF1BQ8WVV4 589 aa17.22■□□□□ 0.35
RPAIN-206ENST00000539417 HVCN1Q96D96 273 aa17.22■□□□□ 0.35
RPAIN-206ENST00000539417 ACCSQ96QU6 501 aa17.22■□□□□ 0.35
RPAIN-206ENST00000539417 MARCH5Q9NX47 278 aa17.22■□□□□ 0.35
RPAIN-206ENST00000539417 STYXL1Q9Y6J8 313 aa17.22■□□□□ 0.35
RPAIN-206ENST00000539417 NRP1O14786 923 aa17.21■□□□□ 0.35
RPAIN-206ENST00000539417 CXCL8P10145 99 aa17.21■□□□□ 0.35
RPAIN-206ENST00000539417 ERVFC1P60507 584 aa17.21■□□□□ 0.35
RPAIN-206ENST00000539417 FAM160A1Q05DH4 1040 aa17.21■□□□□ 0.35
RPAIN-206ENST00000539417 SPAG1Q07617 926 aa17.21■□□□□ 0.35
RPAIN-206ENST00000539417 PNOCQ13519 176 aa17.21■□□□□ 0.35
RPAIN-206ENST00000539417 XKR4Q5GH76 650 aa17.21■□□□□ 0.35
RPAIN-206ENST00000539417 KIAA0895Q8NCT3 520 aa17.21■□□□□ 0.35
RPAIN-206ENST00000539417 SLC17A8Q8NDX2 589 aa17.21■□□□□ 0.35
RPAIN-206ENST00000539417 MAFAQ8NHW3 353 aaPredicted RBP17.21■□□□□ 0.35
RPAIN-206ENST00000539417 ZNF507Q8TCN5 953 aa17.21■□□□□ 0.35
RPAIN-206ENST00000539417 MRPL38Q96DV4 380 aaKnown RBP17.21■□□□□ 0.35
RPAIN-206ENST00000539417 SNX27Q96L92 541 aa17.21■□□□□ 0.35
RPAIN-206ENST00000539417 MSTO1Q9BUK6 570 aa17.21■□□□□ 0.35
RPAIN-206ENST00000539417 CCDC94Q9BW85 323 aaPredicted RBP17.21■□□□□ 0.35
RPAIN-206ENST00000539417 GOLGA2P5Q9HBQ8 144 aa17.21■□□□□ 0.35
RPAIN-206ENST00000539417 PRDM6Q9NQX0 595 aa17.21■□□□□ 0.35
RPAIN-206ENST00000539417 AAASQ9NRG9 546 aa17.21■□□□□ 0.35
RPAIN-206ENST00000539417 SPG21Q9NZD8 308 aa17.21■□□□□ 0.35
RPAIN-206ENST00000539417 KANSL3Q9P2N6 904 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms