RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 SLC8A2Q9UPR5 921 aa7.3□□□□□ -1.24
SORT1-209ENST00000538502 PBRM1Q86U86 1689 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 A0A087WWV3 80 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 TFAMQ00059 246 aaKnown RBP7.29□□□□□ -1.24
SORT1-209ENST00000538502 KDSRQ06136 332 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 SIRT2Q8IXJ6 389 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 RYBPQ8N488 228 aaPredicted RBP7.29□□□□□ -1.24
SORT1-209ENST00000538502 USP38Q8NB14 1042 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 RNF139Q8WU17 664 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 IFT43Q96FT9 208 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 FAM167AQ96KS9 214 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 ANO3Q9BYT9 981 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 CD248Q9HCU0 757 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 WDR35Q9P2L0 1181 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 AURKCQ9UQB9 309 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 ZDHHC9Q9Y397 364 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 ZNF804BA4D1E1 1349 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 USP42Q9H9J4 1324 aaKnown RBP7.29□□□□□ -1.24
SORT1-209ENST00000538502 PHKA1P46020 1223 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 PLA2G4AP47712 749 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 FNTAP49354 379 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 NAA30Q147X3 362 aaPredicted RBP7.29□□□□□ -1.24
SORT1-209ENST00000538502 RBBP7Q16576 425 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 TTC33Q6PID6 262 aaPredicted RBP7.29□□□□□ -1.24
SORT1-209ENST00000538502 MYCBPAPQ8TBZ2 947 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 RASGRP4Q8TDF6 673 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 CYGBQ8WWM9 190 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 OSBP2Q969R2 916 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 ARL8AQ96BM9 186 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 OPTNQ96CV9 577 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 THTPAQ9BU02 230 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 GRID1Q9ULK0 1009 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 FHOD1Q9Y613 1164 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 TMEM120BA0PK00 339 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 TRIM49BA6NDI0 452 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 B2RBV5 119 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 TEX33O43247 280 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 FCGR1AP12314 374 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 BMP3P12645 472 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 COPAP53621 1224 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 ILF2Q12905 390 aaKnown RBP7.29□□□□□ -1.24
SORT1-209ENST00000538502 RSRC2Q7L4I2 434 aaKnown RBP7.29□□□□□ -1.24
SORT1-209ENST00000538502 CLEC4FQ8N1N0 589 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 ULK4Q96C45 1275 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 MAGED4Q96JG8 741 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 C7orf25Q9BPX7 421 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 FUT8Q9BYC5 575 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 OLA1Q9NTK5 396 aaKnown RBP7.29□□□□□ -1.24
SORT1-209ENST00000538502 GGA2Q9UJY4 613 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 STAP1Q9ULZ2 295 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 GINS2Q9Y248 185 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 UBTFL6P0CB48 400 aaPredicted RBP7.29□□□□□ -1.24
SORT1-209ENST00000538502 PSMC3P17980 439 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 C4orf50Q6ZRC1 276 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 LCORLQ8N3X6 602 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 EFHBQ8N7U6 833 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 PPHLN1Q8NEY8 458 aaKnown RBP7.29□□□□□ -1.24
SORT1-209ENST00000538502 SPDYE1Q8NFV5 336 aaPredicted RBP7.29□□□□□ -1.24
SORT1-209ENST00000538502 ARHGEF26Q96DR7 871 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 ACAP3Q96P50 834 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 ERP44Q9BS26 406 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 IGSF1Q8N6C5 1336 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 GNAT1P11488 350 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 SERPINB8P50452 374 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 CDK17Q00537 523 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 PDIA5Q14554 519 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 DEPDC1Q5TB30 811 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 PRPF39Q86UA1 669 aaKnown RBP7.29□□□□□ -1.24
SORT1-209ENST00000538502 MB21D2Q8IYB1 491 aaPredicted RBP7.29□□□□□ -1.24
SORT1-209ENST00000538502 CCNYL1Q8N7R7 359 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 SLC13A1Q9BZW2 595 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 RXFP1Q9HBX9 757 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 ADAM30Q9UKF2 790 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 ABCB11O95342 1321 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 PALLDQ8WX93 1383 aa7.29□□□□□ -1.24
SORT1-209ENST00000538502 USP1O94782 785 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 SNRPAP09012 282 aaKnown RBP7.28□□□□□ -1.24
SORT1-209ENST00000538502 RALBP11234 206 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 VCAM1P19320 739 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 SCP2P22307 547 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 ADORA1P30542 326 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 DMC1Q14565 340 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 P3H1Q32P28 736 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 PCNX4Q63HM2 1172 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 SHC4Q6S5L8 630 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 CCDC103Q8IW40 242 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 RBBP8NLQ8NC74 664 aaPredicted RBP7.28□□□□□ -1.24
SORT1-209ENST00000538502 TRIM54Q9BYV2 358 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 SUGCTQ9HAC7 445 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 SLC9A2Q9UBY0 812 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 CCNL1Q9UK58 526 aaPredicted RBP7.28□□□□□ -1.24
SORT1-209ENST00000538502 PDS5AQ29RF7 1337 aaKnown RBP7.28□□□□□ -1.24
SORT1-209ENST00000538502 PXDNLA1KZ92 1463 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 ZNF263O14978 683 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 DTNBO60941 627 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 ALBP02768 609 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 TMEM253P0C7T8 217 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 MYL2P10916 166 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 GNA15P30679 374 aa7.28□□□□□ -1.24
SORT1-209ENST00000538502 SFNP31947 248 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms