RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 SLC43A3Q8NBI5 491 aa11.59□□□□□ -0.55
TNFRSF1A-211ENST00000538363 DIS3LQ8TF46 1054 aaKnown RBP11.59□□□□□ -0.55
TNFRSF1A-211ENST00000538363 ACAP3Q96P50 834 aa11.59□□□□□ -0.55
TNFRSF1A-211ENST00000538363 NDST4Q9H3R1 872 aa11.59□□□□□ -0.55
TNFRSF1A-211ENST00000538363 PRDM5Q9NQX1 630 aaPredicted RBP11.59□□□□□ -0.55
TNFRSF1A-211ENST00000538363 TMEM39AQ9NV64 488 aa11.59□□□□□ -0.55
TNFRSF1A-211ENST00000538363 DMAC2Q9NW81 257 aa11.59□□□□□ -0.55
TNFRSF1A-211ENST00000538363 PARP2Q9UGN5 583 aa11.59□□□□□ -0.55
TNFRSF1A-211ENST00000538363 MAPK13O15264 365 aa11.58□□□□□ -0.56
TNFRSF1A-211ENST00000538363 NRDCO43847 1150 aa11.58□□□□□ -0.56
TNFRSF1A-211ENST00000538363 CHRNA1P02708 482 aa11.58□□□□□ -0.56
TNFRSF1A-211ENST00000538363 SKIP12755 728 aa11.58□□□□□ -0.56
TNFRSF1A-211ENST00000538363 CDK7P50613 346 aa11.58□□□□□ -0.56
TNFRSF1A-211ENST00000538363 KCNH2Q12809 1159 aa11.58□□□□□ -0.56
TNFRSF1A-211ENST00000538363 BFSP1Q12934 665 aa11.58□□□□□ -0.56
TNFRSF1A-211ENST00000538363 BIRC3Q13489 604 aa11.58□□□□□ -0.56
TNFRSF1A-211ENST00000538363 TSR1Q2NL82 804 aaKnown RBP11.58□□□□□ -0.56
TNFRSF1A-211ENST00000538363 SEZ6Q53EL9 994 aa11.58□□□□□ -0.56
TNFRSF1A-211ENST00000538363 EEF1DP3Q658K8 133 aa11.58□□□□□ -0.56
TNFRSF1A-211ENST00000538363 SLC39A4Q6P5W5 647 aa11.58□□□□□ -0.56
TNFRSF1A-211ENST00000538363 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.58□□□□□ -0.56
TNFRSF1A-211ENST00000538363 IRF2BP1Q8IU81 584 aa11.58□□□□□ -0.56
TNFRSF1A-211ENST00000538363 CBWD2Q8IUF1 395 aa11.58□□□□□ -0.56
TNFRSF1A-211ENST00000538363 FAM126BQ8IXS8 530 aa11.58□□□□□ -0.56
TNFRSF1A-211ENST00000538363 RNF169Q8NCN4 708 aa11.58□□□□□ -0.56
TNFRSF1A-211ENST00000538363 CCDC150Q8NCX0 1101 aa11.58□□□□□ -0.56
TNFRSF1A-211ENST00000538363 CACTINQ8WUQ7 758 aaKnown RBP11.58□□□□□ -0.56
TNFRSF1A-211ENST00000538363 TRIM44Q96DX7 344 aaPredicted RBP11.58□□□□□ -0.56
TNFRSF1A-211ENST00000538363 CCDC51Q96ER9 411 aa11.58□□□□□ -0.56
TNFRSF1A-211ENST00000538363 MRFAP1L1Q96HT8 127 aa11.58□□□□□ -0.56
TNFRSF1A-211ENST00000538363 NAP1L5Q96NT1 182 aaPredicted RBP11.58□□□□□ -0.56
TNFRSF1A-211ENST00000538363 PPP1R12CQ9BZL4 782 aa11.58□□□□□ -0.56
TNFRSF1A-211ENST00000538363 HIPK3Q9H422 1215 aa11.58□□□□□ -0.56
TNFRSF1A-211ENST00000538363 PDZD7Q9H5P4 517 aa11.58□□□□□ -0.56
TNFRSF1A-211ENST00000538363 CHST12Q9NRB3 414 aa11.58□□□□□ -0.56
TNFRSF1A-211ENST00000538363 ST3GAL5Q9UNP4 418 aa11.58□□□□□ -0.56
TNFRSF1A-211ENST00000538363 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.58□□□□□ -0.56
TNFRSF1A-211ENST00000538363 A0A1B0GUA9 196 aa11.57□□□□□ -0.56
TNFRSF1A-211ENST00000538363 LGALS16A8MUM7 142 aa11.57□□□□□ -0.56
TNFRSF1A-211ENST00000538363 IL18RAPO95256 599 aa11.57□□□□□ -0.56
TNFRSF1A-211ENST00000538363 TNNC2P02585 160 aa11.57□□□□□ -0.56
TNFRSF1A-211ENST00000538363 CLTAP09496 248 aa11.57□□□□□ -0.56
TNFRSF1A-211ENST00000538363 IQCF3P0C7M6 154 aa11.57□□□□□ -0.56
TNFRSF1A-211ENST00000538363 STAG3L1P0CL83 205 aa11.57□□□□□ -0.56
TNFRSF1A-211ENST00000538363 ADSSP30520 456 aa11.57□□□□□ -0.56
TNFRSF1A-211ENST00000538363 CD52P31358 61 aa11.57□□□□□ -0.56
TNFRSF1A-211ENST00000538363 DEKP35659 375 aaKnown RBP11.57□□□□□ -0.56
TNFRSF1A-211ENST00000538363 MCL1Q07820 350 aa11.57□□□□□ -0.56
TNFRSF1A-211ENST00000538363 CYP24A1Q07973 514 aa11.57□□□□□ -0.56
TNFRSF1A-211ENST00000538363 FAM26DQ5JW98 314 aa11.57□□□□□ -0.56
TNFRSF1A-211ENST00000538363 GBP6Q6ZN66 633 aa11.57□□□□□ -0.56
TNFRSF1A-211ENST00000538363 TMC2Q8TDI7 906 aa11.57□□□□□ -0.56
TNFRSF1A-211ENST00000538363 CPLX3Q8WVH0 158 aa11.57□□□□□ -0.56
TNFRSF1A-211ENST00000538363 SEPT8Q92599 483 aa11.57□□□□□ -0.56
TNFRSF1A-211ENST00000538363 KCNN1Q92952 543 aa11.57□□□□□ -0.56
TNFRSF1A-211ENST00000538363 WNT8BQ93098 351 aa11.57□□□□□ -0.56
TNFRSF1A-211ENST00000538363 TOX2Q96NM4 488 aa11.57□□□□□ -0.56
TNFRSF1A-211ENST00000538363 CDT1Q9H211 546 aa11.57□□□□□ -0.56
TNFRSF1A-211ENST00000538363 RTN4Q9NQC3 1192 aaKnown RBP11.57□□□□□ -0.56
TNFRSF1A-211ENST00000538363 TOPORSQ9NS56 1045 aaPredicted RBP11.57□□□□□ -0.56
TNFRSF1A-211ENST00000538363 AGPAT5Q9NUQ2 364 aa11.57□□□□□ -0.56
TNFRSF1A-211ENST00000538363 PADI3Q9ULW8 664 aa11.57□□□□□ -0.56
TNFRSF1A-211ENST00000538363 COLQQ9Y215 455 aaPredicted RBP11.57□□□□□ -0.56
TNFRSF1A-211ENST00000538363 STYXL1Q9Y6J8 313 aa11.57□□□□□ -0.56
TNFRSF1A-211ENST00000538363 A0A1B0GTH6 734 aa11.56□□□□□ -0.56
TNFRSF1A-211ENST00000538363 LRRC10BA6NIK2 292 aa11.56□□□□□ -0.56
TNFRSF1A-211ENST00000538363 PARNO95453 639 aaKnown RBP11.56□□□□□ -0.56
TNFRSF1A-211ENST00000538363 CLTBP09497 229 aa11.56□□□□□ -0.56
TNFRSF1A-211ENST00000538363 TMEM191BP0C7N4 346 aa11.56□□□□□ -0.56
TNFRSF1A-211ENST00000538363 TRIM49P0CI25 452 aa11.56□□□□□ -0.56
TNFRSF1A-211ENST00000538363 TRIM49CP0CI26 452 aa11.56□□□□□ -0.56
TNFRSF1A-211ENST00000538363 ITGA4P13612 1032 aa11.56□□□□□ -0.56
TNFRSF1A-211ENST00000538363 EN2P19622 333 aaPredicted RBP11.56□□□□□ -0.56
TNFRSF1A-211ENST00000538363 CCL23P55773 120 aa11.56□□□□□ -0.56
TNFRSF1A-211ENST00000538363 MARSP56192 900 aaKnown RBP11.56□□□□□ -0.56
TNFRSF1A-211ENST00000538363 TFAMQ00059 246 aaKnown RBP11.56□□□□□ -0.56
TNFRSF1A-211ENST00000538363 MYL7Q01449 175 aa11.56□□□□□ -0.56
TNFRSF1A-211ENST00000538363 TRPC3Q13507 836 aa11.56□□□□□ -0.56
TNFRSF1A-211ENST00000538363 NR1I3Q14994 352 aa11.56□□□□□ -0.56
TNFRSF1A-211ENST00000538363 WDR44Q5JSH3 913 aa11.56□□□□□ -0.56
TNFRSF1A-211ENST00000538363 FBXO47Q5MNV8 452 aa11.56□□□□□ -0.56
TNFRSF1A-211ENST00000538363 ANKRD33Q7Z3H0 272 aa11.56□□□□□ -0.56
TNFRSF1A-211ENST00000538363 CACNA2D4Q7Z3S7 1137 aa11.56□□□□□ -0.56
TNFRSF1A-211ENST00000538363 FAM228AQ86W67 206 aa11.56□□□□□ -0.56
TNFRSF1A-211ENST00000538363 TRIM59Q8IWR1 403 aa11.56□□□□□ -0.56
TNFRSF1A-211ENST00000538363 ZC3H3Q8IXZ2 948 aaKnown RBP11.56□□□□□ -0.56
TNFRSF1A-211ENST00000538363 ZNF397Q8NF99 534 aaPredicted RBP11.56□□□□□ -0.56
TNFRSF1A-211ENST00000538363 NEK11Q8NG66 645 aa11.56□□□□□ -0.56
TNFRSF1A-211ENST00000538363 TMEM40Q8WWA1 233 aa11.56□□□□□ -0.56
TNFRSF1A-211ENST00000538363 DHX38Q92620 1227 aaKnown RBP11.56□□□□□ -0.56
TNFRSF1A-211ENST00000538363 PGBD4Q96DM1 585 aa11.56□□□□□ -0.56
TNFRSF1A-211ENST00000538363 ANKRD36BP1Q96IX9 119 aa11.56□□□□□ -0.56
TNFRSF1A-211ENST00000538363 NUP58Q9BVL2 599 aa11.56□□□□□ -0.56
TNFRSF1A-211ENST00000538363 HSD3B7Q9H2F3 369 aa11.56□□□□□ -0.56
TNFRSF1A-211ENST00000538363 LRFN2Q9ULH4 789 aa11.56□□□□□ -0.56
TNFRSF1A-211ENST00000538363 SQORQ9Y6N5 450 aa11.56□□□□□ -0.56
TNFRSF1A-211ENST00000538363 CENPFP49454 3210 aa11.56□□□□□ -0.56
TNFRSF1A-211ENST00000538363 STK25O00506 426 aa11.55□□□□□ -0.56
TNFRSF1A-211ENST00000538363 TEX33O43247 280 aa11.55□□□□□ -0.56
TNFRSF1A-211ENST00000538363 XPOTO43592 962 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms