RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 KLHL5Q96PQ7 755 aa23.58■■□□□ 1.37
CCDC78-215ENST00000538176 ACO2Q99798 780 aaKnown RBP23.58■■□□□ 1.37
CCDC78-215ENST00000538176 CCSER1Q9C0I3 900 aa23.58■■□□□ 1.37
CCDC78-215ENST00000538176 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.58■■□□□ 1.37
CCDC78-215ENST00000538176 TOPORSQ9NS56 1045 aaPredicted RBP23.58■■□□□ 1.37
CCDC78-215ENST00000538176 ADAM28Q9UKQ2 775 aa23.58■■□□□ 1.37
CCDC78-215ENST00000538176 LOC730098B7Z3J9 87 aa23.57■■□□□ 1.36
CCDC78-215ENST00000538176 TADA2AO75478 443 aa23.57■■□□□ 1.36
CCDC78-215ENST00000538176 RECQL4O94761 1208 aa23.57■■□□□ 1.36
CCDC78-215ENST00000538176 ADH1AP07327 375 aa23.57■■□□□ 1.36
CCDC78-215ENST00000538176 GLUD2P49448 558 aa23.57■■□□□ 1.36
CCDC78-215ENST00000538176 YARSP54577 528 aaKnown RBP23.57■■□□□ 1.36
CCDC78-215ENST00000538176 CREMQ03060 361 aa23.57■■□□□ 1.36
CCDC78-215ENST00000538176 USP41Q3LFD5 358 aa23.57■■□□□ 1.36
CCDC78-215ENST00000538176 TMEM31Q5JXX7 168 aa23.57■■□□□ 1.36
CCDC78-215ENST00000538176 SLC22A17Q8WUG5 538 aa23.57■■□□□ 1.36
CCDC78-215ENST00000538176 AUTS2Q8WXX7 1259 aa23.57■■□□□ 1.36
CCDC78-215ENST00000538176 KCNN1Q92952 543 aa23.57■■□□□ 1.36
CCDC78-215ENST00000538176 RIPOR3Q96MK2 946 aa23.57■■□□□ 1.36
CCDC78-215ENST00000538176 PLIN2Q99541 437 aa23.57■■□□□ 1.36
CCDC78-215ENST00000538176 CCDC94Q9BW85 323 aaPredicted RBP23.57■■□□□ 1.36
CCDC78-215ENST00000538176 CHST7Q9NS84 486 aa23.57■■□□□ 1.36
CCDC78-215ENST00000538176 MORC2Q9Y6X9 1032 aaPredicted RBP23.57■■□□□ 1.36
CCDC78-215ENST00000538176 MTHFRP42898 656 aa23.56■■□□□ 1.36
CCDC78-215ENST00000538176 DSG1Q02413 1049 aa23.56■■□□□ 1.36
CCDC78-215ENST00000538176 ELAVL2Q12926 359 aaKnown RBP23.56■■□□□ 1.36
CCDC78-215ENST00000538176 HSP90AA2PQ14568 343 aaPredicted RBP23.56■■□□□ 1.36
CCDC78-215ENST00000538176 ATAT1Q5SQI0 421 aa23.56■■□□□ 1.36
CCDC78-215ENST00000538176 KIAA0319Q5VV43 1072 aa23.56■■□□□ 1.36
CCDC78-215ENST00000538176 EEF1DP3Q658K8 133 aa23.56■■□□□ 1.36
CCDC78-215ENST00000538176 TCHPQ9BT92 498 aa23.56■■□□□ 1.36
CCDC78-215ENST00000538176 RXFP1Q9HBX9 757 aa23.56■■□□□ 1.36
CCDC78-215ENST00000538176 PTPRHQ9HD43 1115 aa23.56■■□□□ 1.36
CCDC78-215ENST00000538176 CCDC39Q9UFE4 941 aa23.56■■□□□ 1.36
CCDC78-215ENST00000538176 SFI1A8K8P3 1242 aa23.55■■□□□ 1.36
CCDC78-215ENST00000538176 SLC16A4O15374 487 aa23.55■■□□□ 1.36
CCDC78-215ENST00000538176 CNPP09543 421 aaKnown RBP23.55■■□□□ 1.36
CCDC78-215ENST00000538176 MCF2P10911 925 aa23.55■■□□□ 1.36
CCDC78-215ENST00000538176 GRM5P41594 1212 aa23.55■■□□□ 1.36
CCDC78-215ENST00000538176 FUT10Q6P4F1 479 aa23.55■■□□□ 1.36
CCDC78-215ENST00000538176 ZPBP2Q6X784 338 aa23.55■■□□□ 1.36
CCDC78-215ENST00000538176 GDAQ9Y2T3 454 aa23.55■■□□□ 1.36
CCDC78-215ENST00000538176 NR2E1Q9Y466 385 aa23.55■■□□□ 1.36
CCDC78-215ENST00000538176 SRPRBQ9Y5M8 271 aaKnown RBP23.55■■□□□ 1.36
CCDC78-215ENST00000538176 SF3B1O75533 1304 aaKnown RBP eCLIP23.55■■□□□ 1.36
CCDC78-215ENST00000538176 PTGESO14684 152 aa23.54■■□□□ 1.36
CCDC78-215ENST00000538176 STX6O43752 255 aa23.54■■□□□ 1.36
CCDC78-215ENST00000538176 TOM1L1O75674 476 aa23.54■■□□□ 1.36
CCDC78-215ENST00000538176 BRD1O95696 1058 aa23.54■■□□□ 1.36
CCDC78-215ENST00000538176 EDN1P05305 212 aa23.54■■□□□ 1.36
CCDC78-215ENST00000538176 DDIT3P35638 169 aa23.54■■□□□ 1.36
CCDC78-215ENST00000538176 TXLNAP40222 546 aa23.54■■□□□ 1.36
CCDC78-215ENST00000538176 CLCN4P51793 760 aa23.54■■□□□ 1.36
CCDC78-215ENST00000538176 RESTQ13127 1097 aa23.54■■□□□ 1.36
CCDC78-215ENST00000538176 PTPAQ15257 358 aa23.54■■□□□ 1.36
CCDC78-215ENST00000538176 ZNF568Q3ZCX4 644 aa23.54■■□□□ 1.36
CCDC78-215ENST00000538176 HERC4Q5GLZ8 1057 aaPredicted RBP23.54■■□□□ 1.36
CCDC78-215ENST00000538176 PDXDC1Q6P996 788 aa23.54■■□□□ 1.36
CCDC78-215ENST00000538176 MPZL3Q6UWV2 235 aa23.54■■□□□ 1.36
CCDC78-215ENST00000538176 RNF135Q8IUD6 432 aa23.54■■□□□ 1.36
CCDC78-215ENST00000538176 TMEM161BQ8NDZ6 487 aa23.54■■□□□ 1.36
CCDC78-215ENST00000538176 HDAC7Q8WUI4 952 aa23.54■■□□□ 1.36
CCDC78-215ENST00000538176 KHSRPQ92945 711 aaKnown RBP eCLIP23.54■■□□□ 1.36
CCDC78-215ENST00000538176 UROC1Q96N76 676 aa23.54■■□□□ 1.36
CCDC78-215ENST00000538176 SLC38A7Q9NVC3 462 aa23.54■■□□□ 1.36
CCDC78-215ENST00000538176 FNIP2Q9P278 1114 aa23.54■■□□□ 1.36
CCDC78-215ENST00000538176 USP20Q9Y2K6 914 aa23.54■■□□□ 1.36
CCDC78-215ENST00000538176 PROZP22891 400 aa23.53■■□□□ 1.36
CCDC78-215ENST00000538176 RAD51AP2Q09MP3 1159 aa23.53■■□□□ 1.36
CCDC78-215ENST00000538176 ARSHQ5FYA8 562 aa23.53■■□□□ 1.36
CCDC78-215ENST00000538176 CYP26C1Q6V0L0 522 aa23.53■■□□□ 1.36
CCDC78-215ENST00000538176 FBXL18Q96ME1 805 aa23.53■■□□□ 1.36
CCDC78-215ENST00000538176 ACAP3Q96P50 834 aa23.53■■□□□ 1.36
CCDC78-215ENST00000538176 TARS2Q9BW92 718 aaKnown RBP23.53■■□□□ 1.36
CCDC78-215ENST00000538176 SFXN1Q9H9B4 322 aa23.53■■□□□ 1.36
CCDC78-215ENST00000538176 CLIC4Q9Y696 253 aa23.53■■□□□ 1.36
CCDC78-215ENST00000538176 SPDYE4A6NLX3 237 aa23.52■■□□□ 1.36
CCDC78-215ENST00000538176 C2CD2LO14523 706 aa23.52■■□□□ 1.36
CCDC78-215ENST00000538176 MAPTP10636 758 aaKnown RBP23.52■■□□□ 1.36
CCDC78-215ENST00000538176 EPCAMP16422 314 aa23.52■■□□□ 1.36
CCDC78-215ENST00000538176 XKR4Q5GH76 650 aa23.52■■□□□ 1.36
CCDC78-215ENST00000538176 TAS1R3Q7RTX0 852 aa23.52■■□□□ 1.36
CCDC78-215ENST00000538176 TAS1R1Q7RTX1 841 aa23.52■■□□□ 1.36
CCDC78-215ENST00000538176 GPBP1Q86WP2 473 aa23.52■■□□□ 1.36
CCDC78-215ENST00000538176 LARP4BQ92615 738 aaKnown RBP23.52■■□□□ 1.36
CCDC78-215ENST00000538176 RAD54LQ92698 747 aa23.52■■□□□ 1.36
CCDC78-215ENST00000538176 DDX27Q96GQ7 796 aaKnown RBP23.52■■□□□ 1.36
CCDC78-215ENST00000538176 RPGRIP1Q96KN7 1286 aa23.52■■□□□ 1.36
CCDC78-215ENST00000538176 GPR62Q9BZJ7 368 aa23.52■■□□□ 1.36
CCDC78-215ENST00000538176 CDT1Q9H211 546 aa23.52■■□□□ 1.36
CCDC78-215ENST00000538176 PARVGQ9HBI0 331 aa23.52■■□□□ 1.36
CCDC78-215ENST00000538176 STK17AQ9UEE5 414 aa23.52■■□□□ 1.36
CCDC78-215ENST00000538176 MTMR6Q9Y217 621 aa23.52■■□□□ 1.36
CCDC78-215ENST00000538176 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.52■■□□□ 1.36
CCDC78-215ENST00000538176 MYH11P35749 1972 aa23.52■■□□□ 1.36
CCDC78-215ENST00000538176 PRR33A8MZF0 331 aa23.51■■□□□ 1.35
CCDC78-215ENST00000538176 TMEM189-UBE2V1I3L0A0 370 aa23.51■■□□□ 1.35
CCDC78-215ENST00000538176 TEX28O15482 410 aa23.51■■□□□ 1.35
CCDC78-215ENST00000538176 TRAPPC3O43617 180 aa23.51■■□□□ 1.35
CCDC78-215ENST00000538176 KRT18P05783 430 aaKnown RBP23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms