RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 POTEJP0CG39 1038 aa13.02□□□□□ -0.33
CPSF7-218ENST00000537641 PYGMP11217 842 aa13.02□□□□□ -0.33
CPSF7-218ENST00000537641 POLD1P28340 1107 aa13.02□□□□□ -0.33
CPSF7-218ENST00000537641 RXRBP28702 533 aa13.02□□□□□ -0.33
CPSF7-218ENST00000537641 SLCO1A2P46721 670 aa13.02□□□□□ -0.33
CPSF7-218ENST00000537641 ALDH5A1P51649 535 aaPredicted RBP13.02□□□□□ -0.33
CPSF7-218ENST00000537641 RWDD2BP57060 319 aa13.02□□□□□ -0.33
CPSF7-218ENST00000537641 CCDC15Q0P6D6 951 aa13.02□□□□□ -0.33
CPSF7-218ENST00000537641 IKQ13123 557 aaPredicted RBP13.02□□□□□ -0.33
CPSF7-218ENST00000537641 UBAP2Q5T6F2 1119 aaKnown RBP13.02□□□□□ -0.33
CPSF7-218ENST00000537641 LRCH2Q5VUJ6 765 aa13.02□□□□□ -0.33
CPSF7-218ENST00000537641 VSTM1Q6UX27 236 aa13.02□□□□□ -0.33
CPSF7-218ENST00000537641 SPATA21Q7Z572 469 aa13.02□□□□□ -0.33
CPSF7-218ENST00000537641 ARHGEF19Q8IW93 802 aa13.02□□□□□ -0.33
CPSF7-218ENST00000537641 ZNF564Q8TBZ8 553 aaPredicted RBP13.02□□□□□ -0.33
CPSF7-218ENST00000537641 PIGOQ8TEQ8 1089 aa13.02□□□□□ -0.33
CPSF7-218ENST00000537641 GRAMD1AQ96CP6 724 aa13.02□□□□□ -0.33
CPSF7-218ENST00000537641 TBC1D31Q96DN5 1066 aa13.02□□□□□ -0.33
CPSF7-218ENST00000537641 STAMBPL1Q96FJ0 436 aa13.02□□□□□ -0.33
CPSF7-218ENST00000537641 MTFR1LQ9H019 292 aa13.02□□□□□ -0.33
CPSF7-218ENST00000537641 IKZF4Q9H2S9 585 aa13.02□□□□□ -0.33
CPSF7-218ENST00000537641 UBE2TQ9NPD8 197 aaPredicted RBP13.02□□□□□ -0.33
CPSF7-218ENST00000537641 DBR1Q9UK59 544 aaKnown RBP13.02□□□□□ -0.33
CPSF7-218ENST00000537641 GTF3C4Q9UKN8 822 aa13.02□□□□□ -0.33
CPSF7-218ENST00000537641 EMSYQ7Z589 1322 aa13.02□□□□□ -0.33
CPSF7-218ENST00000537641 TMEM120BA0PK00 339 aa13.01□□□□□ -0.33
CPSF7-218ENST00000537641 FSCN2O14926 492 aa13.01□□□□□ -0.33
CPSF7-218ENST00000537641 SPOPO43791 374 aa13.01□□□□□ -0.33
CPSF7-218ENST00000537641 ITIH2P19823 946 aa13.01□□□□□ -0.33
CPSF7-218ENST00000537641 SCP2P22307 547 aa13.01□□□□□ -0.33
CPSF7-218ENST00000537641 ACVR2BQ13705 512 aa13.01□□□□□ -0.33
CPSF7-218ENST00000537641 PTK6Q13882 451 aa13.01□□□□□ -0.33
CPSF7-218ENST00000537641 ACCSLQ4AC99 568 aa13.01□□□□□ -0.33
CPSF7-218ENST00000537641 ODR4Q5SWX8 454 aa13.01□□□□□ -0.33
CPSF7-218ENST00000537641 RNF43Q68DV7 783 aa13.01□□□□□ -0.33
CPSF7-218ENST00000537641 TPH2Q8IWU9 490 aa13.01□□□□□ -0.33
CPSF7-218ENST00000537641 UHMK1Q8TAS1 419 aaKnown RBP13.01□□□□□ -0.33
CPSF7-218ENST00000537641 EPS8L1Q8TE68 723 aa13.01□□□□□ -0.33
CPSF7-218ENST00000537641 AGAP11Q8TF27 550 aa13.01□□□□□ -0.33
CPSF7-218ENST00000537641 ANKRD27Q96NW4 1050 aa13.01□□□□□ -0.33
CPSF7-218ENST00000537641 WDR11Q9BZH6 1224 aa13.01□□□□□ -0.33
CPSF7-218ENST00000537641 TMEM206Q9H813 350 aa13.01□□□□□ -0.33
CPSF7-218ENST00000537641 EHMT1Q9H9B1 1298 aa13.01□□□□□ -0.33
CPSF7-218ENST00000537641 RXFP1Q9HBX9 757 aa13.01□□□□□ -0.33
CPSF7-218ENST00000537641 ARHGEF3Q9NR81 526 aa13.01□□□□□ -0.33
CPSF7-218ENST00000537641 FGFR1OP2Q9NVK5 253 aa13.01□□□□□ -0.33
CPSF7-218ENST00000537641 STK32BQ9NY57 414 aa13.01□□□□□ -0.33
CPSF7-218ENST00000537641 PRKAG3Q9UGI9 489 aa13.01□□□□□ -0.33
CPSF7-218ENST00000537641 LGALS13Q9UHV8 139 aa13.01□□□□□ -0.33
CPSF7-218ENST00000537641 ACTL7BQ9Y614 415 aa13.01□□□□□ -0.33
CPSF7-218ENST00000537641 ADGRA3Q8IWK6 1321 aa13□□□□□ -0.33
CPSF7-218ENST00000537641 IGF2BP3O00425 579 aaKnown RBP eCLIP13□□□□□ -0.33
CPSF7-218ENST00000537641 CHRNB2P17787 502 aa13□□□□□ -0.33
CPSF7-218ENST00000537641 VAMP7P51809 220 aa13□□□□□ -0.33
CPSF7-218ENST00000537641 KCNJ2P63252 427 aa13□□□□□ -0.33
CPSF7-218ENST00000537641 JAG1P78504 1218 aa13□□□□□ -0.33
CPSF7-218ENST00000537641 MAP2K1Q02750 393 aaPredicted RBP13□□□□□ -0.33
CPSF7-218ENST00000537641 MYO1EQ12965 1108 aa13□□□□□ -0.33
CPSF7-218ENST00000537641 USH1GQ495M9 461 aa13□□□□□ -0.33
CPSF7-218ENST00000537641 SYCP3Q8IZU3 236 aa13□□□□□ -0.33
CPSF7-218ENST00000537641 GRK7Q8WTQ7 553 aa13□□□□□ -0.33
CPSF7-218ENST00000537641 NSMCE1Q8WV22 266 aa13□□□□□ -0.33
CPSF7-218ENST00000537641 KLHL29Q96CT2 875 aa13□□□□□ -0.33
CPSF7-218ENST00000537641 SNF8Q96H20 258 aa13□□□□□ -0.33
CPSF7-218ENST00000537641 MAGEB18Q96M61 343 aa13□□□□□ -0.33
CPSF7-218ENST00000537641 WDR18Q9BV38 432 aa13□□□□□ -0.33
CPSF7-218ENST00000537641 TRIM7Q9C029 511 aa13□□□□□ -0.33
CPSF7-218ENST00000537641 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13□□□□□ -0.338e-6■■□□□ 11.4
CPSF7-218ENST00000537641 AAASQ9NRG9 546 aa13□□□□□ -0.33
CPSF7-218ENST00000537641 NOCTQ9UK39 431 aaKnown RBP13□□□□□ -0.33
CPSF7-218ENST00000537641 CD2APQ9Y5K6 639 aa13□□□□□ -0.33
CPSF7-218ENST00000537641 ZNFX1Q9P2E3 1918 aaKnown RBP13□□□□□ -0.33
CPSF7-218ENST00000537641 SPDYE2BA6NHP3 402 aa12.99□□□□□ -0.33
CPSF7-218ENST00000537641 SORBS3O60504 671 aa12.99□□□□□ -0.33
CPSF7-218ENST00000537641 ANP32DO95626 131 aa12.99□□□□□ -0.33
CPSF7-218ENST00000537641 SPDYE6P0CI01 402 aa12.99□□□□□ -0.33
CPSF7-218ENST00000537641 IBSPP21815 317 aaPredicted RBP12.99□□□□□ -0.33
CPSF7-218ENST00000537641 SNRPFP62306 86 aaKnown RBP12.99□□□□□ -0.33
CPSF7-218ENST00000537641 LACTBP83111 547 aaPredicted RBP12.99□□□□□ -0.33
CPSF7-218ENST00000537641 KRT17Q04695 432 aa12.99□□□□□ -0.33
CPSF7-218ENST00000537641 LONRF1Q17RB8 773 aa12.99□□□□□ -0.33
CPSF7-218ENST00000537641 CCDC38Q502W7 563 aa12.99□□□□□ -0.33
CPSF7-218ENST00000537641 NUGGCQ68CJ6 796 aa12.99□□□□□ -0.33
CPSF7-218ENST00000537641 CHADLQ6NUI6 762 aa12.99□□□□□ -0.33
CPSF7-218ENST00000537641 RSBN1LQ6PCB5 846 aaPredicted RBP12.99□□□□□ -0.33
CPSF7-218ENST00000537641 ARHGEF18Q6ZSZ5 1173 aa12.99□□□□□ -0.33
CPSF7-218ENST00000537641 CEP128Q6ZU80 1094 aa12.99□□□□□ -0.33
CPSF7-218ENST00000537641 ASRGL1Q7L266 308 aa12.99□□□□□ -0.33
CPSF7-218ENST00000537641 CCDC25Q86WR0 208 aa12.99□□□□□ -0.33
CPSF7-218ENST00000537641 KSR1Q8IVT5 923 aa12.99□□□□□ -0.33
CPSF7-218ENST00000537641 FAM71AQ8IYT1 594 aa12.99□□□□□ -0.33
CPSF7-218ENST00000537641 RIBC1Q8N443 379 aaPredicted RBP12.99□□□□□ -0.33
CPSF7-218ENST00000537641 PSPC1Q8WXF1 523 aaKnown RBP12.99□□□□□ -0.33
CPSF7-218ENST00000537641 PCDHB18PQ96TA0 734 aa12.99□□□□□ -0.33
CPSF7-218ENST00000537641 NUP85Q9BW27 656 aa12.99□□□□□ -0.33
CPSF7-218ENST00000537641 ARHGEF10LQ9HCE6 1279 aa12.99□□□□□ -0.33
CPSF7-218ENST00000537641 SMCHD1A6NHR9 2005 aa12.99□□□□□ -0.33
CPSF7-218ENST00000537641 A0A1W2PRG0 241 aa12.99□□□□□ -0.33
CPSF7-218ENST00000537641 TCRBV7S2A1N4TA0A589 114 aa12.99□□□□□ -0.33
CPSF7-218ENST00000537641 ARHGEF35A5YM69 484 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms