RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 HAUS3Q68CZ6 603 aa12.55□□□□□ -0.4
CHRNB1-202ENST00000536404 VSIG10LQ86VR7 867 aa12.55□□□□□ -0.4
CHRNB1-202ENST00000536404 RIN2Q8WYP3 895 aaPredicted RBP12.55□□□□□ -0.4
CHRNB1-202ENST00000536404 GPKOWQ92917 476 aaPredicted RBP eCLIP12.55□□□□□ -0.4
CHRNB1-202ENST00000536404 TMEM60Q9H2L4 133 aa12.55□□□□□ -0.4
CHRNB1-202ENST00000536404 SUDS3Q9H7L9 328 aaPredicted RBP12.55□□□□□ -0.4
CHRNB1-202ENST00000536404 MMRN2Q9H8L6 949 aa12.55□□□□□ -0.4
CHRNB1-202ENST00000536404 GDF3Q9NR23 364 aa12.55□□□□□ -0.4
CHRNB1-202ENST00000536404 MAP3K20Q9NYL2 800 aaKnown RBP12.55□□□□□ -0.4
CHRNB1-202ENST00000536404 CEP72Q9P209 647 aa12.55□□□□□ -0.4
CHRNB1-202ENST00000536404 ARHGAP20Q9P2F6 1191 aa12.55□□□□□ -0.4
CHRNB1-202ENST00000536404 NOD1Q9Y239 953 aa12.55□□□□□ -0.4
CHRNB1-202ENST00000536404 CAPN6Q9Y6Q1 641 aa12.55□□□□□ -0.4
CHRNB1-202ENST00000536404 TRIP12Q14669 1992 aaPredicted RBP12.55□□□□□ -0.4
CHRNB1-202ENST00000536404 PNMA6FA0A0J9YX94 578 aa12.55□□□□□ -0.4
CHRNB1-202ENST00000536404 COQ9O75208 318 aa12.55□□□□□ -0.4
CHRNB1-202ENST00000536404 SNUPNO95149 360 aaKnown RBP12.55□□□□□ -0.4
CHRNB1-202ENST00000536404 PSEN2P49810 448 aa12.55□□□□□ -0.4
CHRNB1-202ENST00000536404 NAPAP54920 295 aa12.55□□□□□ -0.4
CHRNB1-202ENST00000536404 SP2Q02086 613 aa12.55□□□□□ -0.4
CHRNB1-202ENST00000536404 STK4Q13043 487 aa12.55□□□□□ -0.4
CHRNB1-202ENST00000536404 ADGRE1Q14246 886 aa12.55□□□□□ -0.4
CHRNB1-202ENST00000536404 DGKDQ16760 1214 aa12.55□□□□□ -0.4
CHRNB1-202ENST00000536404 LRIG3Q6UXM1 1119 aa12.55□□□□□ -0.4
CHRNB1-202ENST00000536404 RRAGAQ7L523 313 aa12.55□□□□□ -0.4
CHRNB1-202ENST00000536404 SAMD3Q8N6K7 520 aa12.55□□□□□ -0.4
CHRNB1-202ENST00000536404 TET1Q8NFU7 2136 aa12.55□□□□□ -0.4
CHRNB1-202ENST00000536404 DHX38Q92620 1227 aaKnown RBP12.55□□□□□ -0.4
CHRNB1-202ENST00000536404 TAF4BQ92750 862 aa12.55□□□□□ -0.4
CHRNB1-202ENST00000536404 EMID1Q96A84 441 aaPredicted RBP12.55□□□□□ -0.4
CHRNB1-202ENST00000536404 RRP36Q96EU6 259 aaKnown RBP12.55□□□□□ -0.4
CHRNB1-202ENST00000536404 CEP63Q96MT8 703 aa12.55□□□□□ -0.4
CHRNB1-202ENST00000536404 SEC63Q9UGP8 760 aaKnown RBP12.55□□□□□ -0.4
CHRNB1-202ENST00000536404 ATP8B3O60423 1300 aa12.54□□□□□ -0.4
CHRNB1-202ENST00000536404 BTNL10A8MVZ5 291 aa12.54□□□□□ -0.4
CHRNB1-202ENST00000536404 PITPNM1O00562 1244 aa12.54□□□□□ -0.4
CHRNB1-202ENST00000536404 ZNF263O14978 683 aa12.54□□□□□ -0.4
CHRNB1-202ENST00000536404 CCNT1O60563 726 aaKnown RBP12.54□□□□□ -0.4
CHRNB1-202ENST00000536404 RTN2O75298 545 aa12.54□□□□□ -0.4
CHRNB1-202ENST00000536404 ZNF286BP0CG31 522 aa12.54□□□□□ -0.4
CHRNB1-202ENST00000536404 ATP2A2P16615 1042 aaKnown RBP12.54□□□□□ -0.4
CHRNB1-202ENST00000536404 ANXA13P27216 316 aa12.54□□□□□ -0.4
CHRNB1-202ENST00000536404 SLC8A1P32418 973 aa12.54□□□□□ -0.4
CHRNB1-202ENST00000536404 RFC2P35250 354 aa12.54□□□□□ -0.4
CHRNB1-202ENST00000536404 FXR2P51116 673 aaKnown RBP eCLIP12.54□□□□□ -0.4
CHRNB1-202ENST00000536404 CDR1P51861 262 aa12.54□□□□□ -0.4
CHRNB1-202ENST00000536404 NAP1L1P55209 391 aaKnown RBP12.54□□□□□ -0.4
CHRNB1-202ENST00000536404 BFSP2Q13515 415 aa12.54□□□□□ -0.4
CHRNB1-202ENST00000536404 PDIA5Q14554 519 aa12.54□□□□□ -0.4
CHRNB1-202ENST00000536404 GPNMBQ14956 572 aa12.54□□□□□ -0.4
CHRNB1-202ENST00000536404 SLMAPQ14BN4 828 aa12.54□□□□□ -0.4
CHRNB1-202ENST00000536404 SETDB1Q15047 1291 aa12.54□□□□□ -0.4
CHRNB1-202ENST00000536404 SFMBT2Q5VUG0 894 aa12.54□□□□□ -0.4
CHRNB1-202ENST00000536404 SESTD1Q86VW0 696 aa12.54□□□□□ -0.4
CHRNB1-202ENST00000536404 GSPT2Q8IYD1 628 aaKnown RBP12.54□□□□□ -0.4
CHRNB1-202ENST00000536404 PPTC7Q8NI37 304 aa12.54□□□□□ -0.4
CHRNB1-202ENST00000536404 ZNF483Q8TF39 744 aaPredicted RBP12.54□□□□□ -0.4
CHRNB1-202ENST00000536404 LRRC45Q96CN5 670 aa12.54□□□□□ -0.4
CHRNB1-202ENST00000536404 GAS2L1Q99501 681 aaPredicted RBP12.54□□□□□ -0.4
CHRNB1-202ENST00000536404 NAP1L4Q99733 375 aaKnown RBP12.54□□□□□ -0.4
CHRNB1-202ENST00000536404 EPN3Q9H201 632 aa12.54□□□□□ -0.4
CHRNB1-202ENST00000536404 BCAS3Q9H6U6 928 aa12.54□□□□□ -0.4
CHRNB1-202ENST00000536404 MLXIPQ9HAP2 919 aa12.54□□□□□ -0.4
CHRNB1-202ENST00000536404 SLC28A3Q9HAS3 691 aa12.54□□□□□ -0.4
CHRNB1-202ENST00000536404 PRDM6Q9NQX0 595 aa12.54□□□□□ -0.4
CHRNB1-202ENST00000536404 DMGDHQ9UI17 866 aaKnown RBP12.54□□□□□ -0.4
CHRNB1-202ENST00000536404 DUSP10Q9Y6W6 482 aa12.54□□□□□ -0.4
CHRNB1-202ENST00000536404 LRRC53A6NM62 1247 aa12.53□□□□□ -0.4
CHRNB1-202ENST00000536404 PP2D1A8MPX8 630 aa12.53□□□□□ -0.4
CHRNB1-202ENST00000536404 GGPS1O95749 300 aa12.53□□□□□ -0.4
CHRNB1-202ENST00000536404 PFKMP08237 780 aa12.53□□□□□ -0.4
CHRNB1-202ENST00000536404 PAX7P23759 505 aa12.53□□□□□ -0.4
CHRNB1-202ENST00000536404 KLK7P49862 253 aa12.53□□□□□ -0.4
CHRNB1-202ENST00000536404 CLNS1AP54105 237 aaKnown RBP12.53□□□□□ -0.4
CHRNB1-202ENST00000536404 ZNF200P98182 395 aaPredicted RBP12.53□□□□□ -0.4
CHRNB1-202ENST00000536404 CUL1Q13616 776 aa12.53□□□□□ -0.4
CHRNB1-202ENST00000536404 MFSD10Q14728 455 aa12.53□□□□□ -0.4
CHRNB1-202ENST00000536404 CELF3Q5SZQ8 465 aaKnown RBP12.53□□□□□ -0.4
CHRNB1-202ENST00000536404 PPP4R3AQ6IN85 833 aa12.53□□□□□ -0.4
CHRNB1-202ENST00000536404 KLHL23Q8NBE8 558 aa12.53□□□□□ -0.4
CHRNB1-202ENST00000536404 GDAP1L1Q96MZ0 367 aa12.53□□□□□ -0.4
CHRNB1-202ENST00000536404 ATP6V0A4Q9HBG4 840 aa12.53□□□□□ -0.4
CHRNB1-202ENST00000536404 FAM207AQ9NSI2 230 aaPredicted RBP12.53□□□□□ -0.4
CHRNB1-202ENST00000536404 BMP2KQ9NSY1 1161 aaPredicted RBP12.53□□□□□ -0.4
CHRNB1-202ENST00000536404 GTF2IRD1Q9UHL9 959 aa12.53□□□□□ -0.4
CHRNB1-202ENST00000536404 TFR2Q9UP52 801 aa12.53□□□□□ -0.4
CHRNB1-202ENST00000536404 PCDHA11Q9Y5I1 949 aa12.53□□□□□ -0.4
CHRNB1-202ENST00000536404 HAS3O00219 553 aa12.52□□□□□ -0.4
CHRNB1-202ENST00000536404 MEFVO15553 781 aaPredicted RBP12.52□□□□□ -0.4
CHRNB1-202ENST00000536404 ACTN1P12814 892 aa12.52□□□□□ -0.4
CHRNB1-202ENST00000536404 UBA1P22314 1058 aaKnown RBP12.52□□□□□ -0.4
CHRNB1-202ENST00000536404 CCND2P30279 289 aa12.52□□□□□ -0.4
CHRNB1-202ENST00000536404 FKBP3Q00688 224 aaKnown RBP12.52□□□□□ -0.4
CHRNB1-202ENST00000536404 IFFO1Q0D2I5 559 aa12.52□□□□□ -0.4
CHRNB1-202ENST00000536404 MTMR3Q13615 1198 aa12.52□□□□□ -0.4
CHRNB1-202ENST00000536404 HIC1Q14526 733 aa12.52□□□□□ -0.4
CHRNB1-202ENST00000536404 NAB2Q15742 525 aa12.52□□□□□ -0.4
CHRNB1-202ENST00000536404 KIAA0753Q2KHM9 967 aa12.52□□□□□ -0.4
CHRNB1-202ENST00000536404 ASTE1Q2TB18 679 aaPredicted RBP12.52□□□□□ -0.4
CHRNB1-202ENST00000536404 LETM2Q2VYF4 491 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms