RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 LY6KQ17RY6 165 aa23.04■■□□□ 1.28
TRIM3-214ENST00000536344 GNPTABQ3T906 1256 aa23.04■■□□□ 1.28
TRIM3-214ENST00000536344 ZC3H3Q8IXZ2 948 aaKnown RBP23.04■■□□□ 1.28
TRIM3-214ENST00000536344 SAMD3Q8N6K7 520 aa23.04■■□□□ 1.28
TRIM3-214ENST00000536344 SLC35C1Q96A29 364 aa23.04■■□□□ 1.28
TRIM3-214ENST00000536344 MAGOHBQ96A72 148 aaKnown RBP23.04■■□□□ 1.28
TRIM3-214ENST00000536344 SPATA31C2B4DYI2 1134 aa23.03■■□□□ 1.28
TRIM3-214ENST00000536344 LRRN2O75325 713 aa23.03■■□□□ 1.28
TRIM3-214ENST00000536344 AP1G2O75843 785 aa23.03■■□□□ 1.28
TRIM3-214ENST00000536344 MUTP22033 750 aa23.03■■□□□ 1.28
TRIM3-214ENST00000536344 RPL13P26373 211 aaKnown RBP23.03■■□□□ 1.28
TRIM3-214ENST00000536344 HOXA7P31268 230 aaPredicted RBP23.03■■□□□ 1.28
TRIM3-214ENST00000536344 SFNP31947 248 aa23.03■■□□□ 1.28
TRIM3-214ENST00000536344 MOGSQ13724 837 aa23.03■■□□□ 1.28
TRIM3-214ENST00000536344 GKAP1Q5VSY0 366 aaPredicted RBP23.03■■□□□ 1.28
TRIM3-214ENST00000536344 ZNF746Q6NUN9 644 aaPredicted RBP23.03■■□□□ 1.28
TRIM3-214ENST00000536344 HAUS6Q7Z4H7 955 aa23.03■■□□□ 1.28
TRIM3-214ENST00000536344 PLCB1Q9NQ66 1216 aa23.03■■□□□ 1.28
TRIM3-214ENST00000536344 DBR1Q9UK59 544 aaKnown RBP23.03■■□□□ 1.28
TRIM3-214ENST00000536344 EXOC3O60645 756 aa23.03■■□□□ 1.28
TRIM3-214ENST00000536344 PPP2R2AP63151 447 aa23.03■■□□□ 1.28
TRIM3-214ENST00000536344 ARFGAP2Q8N6H7 521 aa23.03■■□□□ 1.28
TRIM3-214ENST00000536344 FAM133AQ8N9E0 248 aa23.03■■□□□ 1.28
TRIM3-214ENST00000536344 WHAMMQ8TF30 809 aa23.03■■□□□ 1.28
TRIM3-214ENST00000536344 SLC10A4Q96EP9 437 aa23.03■■□□□ 1.28
TRIM3-214ENST00000536344 ZNF570Q96NI8 536 aa23.03■■□□□ 1.28
TRIM3-214ENST00000536344 GOLPH3Q9H4A6 298 aa23.03■■□□□ 1.28
TRIM3-214ENST00000536344 GGT7Q9UJ14 662 aa23.03■■□□□ 1.28
TRIM3-214ENST00000536344 AJAP1Q9UKB5 411 aaPredicted RBP23.03■■□□□ 1.28
TRIM3-214ENST00000536344 AGTPBP1Q9UPW5 1226 aa23.03■■□□□ 1.28
TRIM3-214ENST00000536344 MYPNQ86TC9 1320 aa23.03■■□□□ 1.28
TRIM3-214ENST00000536344 C5orf60A6NFR6 353 aa23.02■■□□□ 1.28
TRIM3-214ENST00000536344 EIF3DO15371 548 aaKnown RBP eCLIP23.02■■□□□ 1.28
TRIM3-214ENST00000536344 TLR2O60603 784 aa23.02■■□□□ 1.28
TRIM3-214ENST00000536344 DNAJC8O75937 253 aaPredicted RBP23.02■■□□□ 1.28
TRIM3-214ENST00000536344 AFPP02771 609 aaKnown RBP23.02■■□□□ 1.28
TRIM3-214ENST00000536344 PLS3P13797 630 aa23.02■■□□□ 1.28
TRIM3-214ENST00000536344 DRD4P21917 467 aa23.02■■□□□ 1.28
TRIM3-214ENST00000536344 SLC8A3P57103 927 aa23.02■■□□□ 1.28
TRIM3-214ENST00000536344 UBLCP1Q8WVY7 318 aaPredicted RBP23.02■■□□□ 1.28
TRIM3-214ENST00000536344 FAM84AQ96KN4 292 aa23.02■■□□□ 1.28
TRIM3-214ENST00000536344 PORCNQ9H237 461 aa23.02■■□□□ 1.28
TRIM3-214ENST00000536344 EBF2Q9HAK2 575 aa23.02■■□□□ 1.28
TRIM3-214ENST00000536344 MYH9P35579 1960 aaKnown RBP23.02■■□□□ 1.28
TRIM3-214ENST00000536344 MARSP56192 900 aaKnown RBP23.02■■□□□ 1.28
TRIM3-214ENST00000536344 DLG4P78352 724 aa23.02■■□□□ 1.28
TRIM3-214ENST00000536344 CDK17Q00537 523 aa23.02■■□□□ 1.28
TRIM3-214ENST00000536344 CDCA2Q69YH5 1023 aaPredicted RBP23.02■■□□□ 1.28
TRIM3-214ENST00000536344 ARMC9Q7Z3E5 817 aa23.02■■□□□ 1.28
TRIM3-214ENST00000536344 FRMD5Q7Z6J6 570 aa23.02■■□□□ 1.28
TRIM3-214ENST00000536344 AGAP11Q8TF27 550 aa23.02■■□□□ 1.28
TRIM3-214ENST00000536344 ELMO3Q96BJ8 720 aa23.02■■□□□ 1.28
TRIM3-214ENST00000536344 KCND2Q9NZV8 630 aa23.02■■□□□ 1.28
TRIM3-214ENST00000536344 TRPC6Q9Y210 931 aa23.02■■□□□ 1.28
TRIM3-214ENST00000536344 IFFO1Q0D2I5 559 aa23.02■■□□□ 1.27
TRIM3-214ENST00000536344 FAM133BQ5BKY9 247 aaKnown RBP23.02■■□□□ 1.27
TRIM3-214ENST00000536344 PDXDC1Q6P996 788 aa23.02■■□□□ 1.27
TRIM3-214ENST00000536344 NOX5Q96PH1 765 aa23.02■■□□□ 1.27
TRIM3-214ENST00000536344 SEL1LQ9UBV2 794 aa23.02■■□□□ 1.27
TRIM3-214ENST00000536344 C15orf41Q9Y2V0 281 aa23.02■■□□□ 1.27
TRIM3-214ENST00000536344 A0A1W2PQJ5 194 aa23.01■■□□□ 1.27
TRIM3-214ENST00000536344 PSAPP07602 524 aa23.01■■□□□ 1.27
TRIM3-214ENST00000536344 UBA1P22314 1058 aaKnown RBP23.01■■□□□ 1.27
TRIM3-214ENST00000536344 FIGNQ5HY92 759 aa23.01■■□□□ 1.27
TRIM3-214ENST00000536344 XRRA1Q6P2D8 792 aa23.01■■□□□ 1.27
TRIM3-214ENST00000536344 KCTD17Q8N5Z5 321 aa23.01■■□□□ 1.27
TRIM3-214ENST00000536344 MICAL1Q8TDZ2 1067 aa23.01■■□□□ 1.27
TRIM3-214ENST00000536344 FBXL5Q9UKA1 691 aa23.01■■□□□ 1.27
TRIM3-214ENST00000536344 MYBL1P10243 752 aa23.01■■□□□ 1.27
TRIM3-214ENST00000536344 PPIL2Q13356 520 aa23.01■■□□□ 1.27
TRIM3-214ENST00000536344 SNX1Q13596 522 aa23.01■■□□□ 1.27
TRIM3-214ENST00000536344 EXOC3L4Q17RC7 722 aa23.01■■□□□ 1.27
TRIM3-214ENST00000536344 GPAT2Q6NUI2 795 aa23.01■■□□□ 1.27
TRIM3-214ENST00000536344 ABHD15Q6UXT9 468 aa23.01■■□□□ 1.27
TRIM3-214ENST00000536344 ZC3H15Q8WU90 426 aaKnown RBP23.01■■□□□ 1.27
TRIM3-214ENST00000536344 PRCCQ92733 491 aaPredicted RBP23.01■■□□□ 1.27
TRIM3-214ENST00000536344 TMEM143Q96AN5 459 aa23.01■■□□□ 1.27
TRIM3-214ENST00000536344 GCNT4Q9P109 453 aa23.01■■□□□ 1.27
TRIM3-214ENST00000536344 SRRM3A6NNA2 597 aaPredicted RBP23■■□□□ 1.27
TRIM3-214ENST00000536344 CXCL11O14625 94 aa23■■□□□ 1.27
TRIM3-214ENST00000536344 ATP4AP20648 1035 aa23■■□□□ 1.27
TRIM3-214ENST00000536344 MARK3P27448 753 aa23■■□□□ 1.27
TRIM3-214ENST00000536344 PSMC2P35998 433 aaKnown RBP23■■□□□ 1.27
TRIM3-214ENST00000536344 CBWD6Q4V339 395 aa23■■□□□ 1.27
TRIM3-214ENST00000536344 CBWD3Q5JTY5 395 aa23■■□□□ 1.27
TRIM3-214ENST00000536344 CBWD5Q5RIA9 395 aa23■■□□□ 1.27
TRIM3-214ENST00000536344 THEMIS2Q5TEJ8 643 aa23■■□□□ 1.27
TRIM3-214ENST00000536344 FOXR2Q6PJQ5 311 aa23■■□□□ 1.27
TRIM3-214ENST00000536344 TRIM50Q86XT4 487 aa23■■□□□ 1.27
TRIM3-214ENST00000536344 C1orf131Q8NDD1 294 aaKnown RBP23■■□□□ 1.27
TRIM3-214ENST00000536344 SAAL1Q96ER3 474 aa23■■□□□ 1.27
TRIM3-214ENST00000536344 CALR3Q96L12 384 aaKnown RBP23■■□□□ 1.27
TRIM3-214ENST00000536344 STBD1O95210 358 aa23■■□□□ 1.27
TRIM3-214ENST00000536344 ARIH2O95376 493 aa23■■□□□ 1.27
TRIM3-214ENST00000536344 PON1P27169 355 aa23■■□□□ 1.27
TRIM3-214ENST00000536344 NPTX2P47972 431 aa23■■□□□ 1.27
TRIM3-214ENST00000536344 DIAPH2O60879 1101 aa22.99■■□□□ 1.27
TRIM3-214ENST00000536344 LYPLA2O95372 231 aa22.99■■□□□ 1.27
TRIM3-214ENST00000536344 FBXO16Q8IX29 292 aaPredicted RBP22.99■■□□□ 1.27
TRIM3-214ENST00000536344 CCDC63Q8NA47 563 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms