RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 OSTNP61366 133 aa12.39□□□□□ -0.43
TNFRSF1A-208ENST00000536194 GPM6BQ13491 265 aa12.39□□□□□ -0.43
TNFRSF1A-208ENST00000536194 CAMK1Q14012 370 aa12.39□□□□□ -0.43
TNFRSF1A-208ENST00000536194 NOLC1Q14978 699 aaKnown RBP eCLIP12.39□□□□□ -0.43
TNFRSF1A-208ENST00000536194 FAM26FQ5R3K3 315 aa12.39□□□□□ -0.43
TNFRSF1A-208ENST00000536194 ZBTB41Q5SVQ8 909 aa12.39□□□□□ -0.43
TNFRSF1A-208ENST00000536194 SPOUT1Q5T280 376 aaKnown RBP12.39□□□□□ -0.43
TNFRSF1A-208ENST00000536194 KCNT2Q6UVM3 1135 aa12.39□□□□□ -0.43
TNFRSF1A-208ENST00000536194 CLEC17AQ6ZS10 378 aa12.39□□□□□ -0.43
TNFRSF1A-208ENST00000536194 EPM2AIP1Q7L775 607 aaPredicted RBP12.39□□□□□ -0.43
TNFRSF1A-208ENST00000536194 TMEM173Q86WV6 379 aaPredicted RBP12.39□□□□□ -0.43
TNFRSF1A-208ENST00000536194 THNSL1Q8IYQ7 743 aa12.39□□□□□ -0.43
TNFRSF1A-208ENST00000536194 KLHL23Q8NBE8 558 aa12.39□□□□□ -0.43
TNFRSF1A-208ENST00000536194 RSPH1Q8WYR4 309 aa12.39□□□□□ -0.43
TNFRSF1A-208ENST00000536194 P2RX5Q93086 422 aa12.39□□□□□ -0.43
TNFRSF1A-208ENST00000536194 HVCN1Q96D96 273 aa12.39□□□□□ -0.43
TNFRSF1A-208ENST00000536194 GAS2L1Q99501 681 aaPredicted RBP12.39□□□□□ -0.43
TNFRSF1A-208ENST00000536194 PLVAPQ9BX97 442 aa12.39□□□□□ -0.43
TNFRSF1A-208ENST00000536194 ALG13Q9NP73 1137 aaKnown RBP12.39□□□□□ -0.43
TNFRSF1A-208ENST00000536194 UBN1Q9NPG3 1134 aa12.39□□□□□ -0.43
TNFRSF1A-208ENST00000536194 ZMYM2Q9UBW7 1377 aa12.39□□□□□ -0.43
TNFRSF1A-208ENST00000536194 PRRC2BQ5JSZ5 2229 aaKnown RBP12.38□□□□□ -0.43
TNFRSF1A-208ENST00000536194 A0A0B4J269 797 aa12.38□□□□□ -0.43
TNFRSF1A-208ENST00000536194 NT5C1B-RDH14C9J2C7 533 aa12.38□□□□□ -0.43
TNFRSF1A-208ENST00000536194 CLDN3O15551 220 aa12.38□□□□□ -0.43
TNFRSF1A-208ENST00000536194 ZC3H11AO75152 810 aaKnown RBP eCLIP12.38□□□□□ -0.43
TNFRSF1A-208ENST00000536194 RB1P06400 928 aa12.38□□□□□ -0.43
TNFRSF1A-208ENST00000536194 POU3F3P20264 500 aaPredicted RBP12.38□□□□□ -0.43
TNFRSF1A-208ENST00000536194 IGFBP4P22692 258 aa12.38□□□□□ -0.43
TNFRSF1A-208ENST00000536194 DNAJB1P25685 340 aa12.38□□□□□ -0.43
TNFRSF1A-208ENST00000536194 ADSSP30520 456 aa12.38□□□□□ -0.43
TNFRSF1A-208ENST00000536194 ABCD1P33897 745 aa12.38□□□□□ -0.43
TNFRSF1A-208ENST00000536194 TNFSF9P41273 254 aa12.38□□□□□ -0.43
TNFRSF1A-208ENST00000536194 SLC11A1P49279 550 aa12.38□□□□□ -0.43
TNFRSF1A-208ENST00000536194 FAM160A1Q05DH4 1040 aa12.38□□□□□ -0.43
TNFRSF1A-208ENST00000536194 DSC1Q08554 894 aa12.38□□□□□ -0.43
TNFRSF1A-208ENST00000536194 DPYDQ12882 1025 aa12.38□□□□□ -0.43
TNFRSF1A-208ENST00000536194 NAB2Q15742 525 aa12.38□□□□□ -0.43
TNFRSF1A-208ENST00000536194 KMT5BQ4FZB7 885 aa12.38□□□□□ -0.43
TNFRSF1A-208ENST00000536194 ALKAL1Q6UXT8 129 aa12.38□□□□□ -0.43
TNFRSF1A-208ENST00000536194 COLGALT2Q8IYK4 626 aa12.38□□□□□ -0.43
TNFRSF1A-208ENST00000536194 HACE1Q8IYU2 909 aa12.38□□□□□ -0.43
TNFRSF1A-208ENST00000536194 SPPL3Q8TCT6 385 aa12.38□□□□□ -0.43
TNFRSF1A-208ENST00000536194 URGCPQ8TCY9 931 aa12.38□□□□□ -0.43
TNFRSF1A-208ENST00000536194 BCL7CQ8WUZ0 217 aaPredicted RBP12.38□□□□□ -0.43
TNFRSF1A-208ENST00000536194 TCHPQ9BT92 498 aa12.38□□□□□ -0.43
TNFRSF1A-208ENST00000536194 C11orf84Q9BUA3 381 aaPredicted RBP12.38□□□□□ -0.43
TNFRSF1A-208ENST00000536194 GBP3Q9H0R5 595 aa12.38□□□□□ -0.43
TNFRSF1A-208ENST00000536194 KANSL3Q9P2N6 904 aa12.38□□□□□ -0.43
TNFRSF1A-208ENST00000536194 CACNG4Q9UBN1 327 aa12.38□□□□□ -0.43
TNFRSF1A-208ENST00000536194 STXBP5LQ9Y2K9 1186 aa12.38□□□□□ -0.43
TNFRSF1A-208ENST00000536194 MTCH2Q9Y6C9 303 aa12.38□□□□□ -0.43
TNFRSF1A-208ENST00000536194 STYXL1Q9Y6J8 313 aa12.38□□□□□ -0.43
TNFRSF1A-208ENST00000536194 TRANK1O15050 2925 aa12.37□□□□□ -0.43
TNFRSF1A-208ENST00000536194 FGF18O76093 207 aa12.37□□□□□ -0.43
TNFRSF1A-208ENST00000536194 MYL1P05976 194 aa12.37□□□□□ -0.43
TNFRSF1A-208ENST00000536194 GALTP07902 379 aa12.37□□□□□ -0.43
TNFRSF1A-208ENST00000536194 RNASELQ05823 741 aaKnown RBP12.37□□□□□ -0.43
TNFRSF1A-208ENST00000536194 GRIK3Q13003 919 aa12.37□□□□□ -0.43
TNFRSF1A-208ENST00000536194 ALCAMQ13740 583 aa12.37□□□□□ -0.43
TNFRSF1A-208ENST00000536194 CSPP1Q1MSJ5 1256 aa12.37□□□□□ -0.43
TNFRSF1A-208ENST00000536194 XKR4Q5GH76 650 aa12.37□□□□□ -0.43
TNFRSF1A-208ENST00000536194 GLRA4Q5JXX5 417 aa12.37□□□□□ -0.43
TNFRSF1A-208ENST00000536194 APBB1IPQ7Z5R6 666 aaPredicted RBP12.37□□□□□ -0.43
TNFRSF1A-208ENST00000536194 SLC39A11Q8N1S5 342 aa12.37□□□□□ -0.43
TNFRSF1A-208ENST00000536194 KIAA0895Q8NCT3 520 aa12.37□□□□□ -0.43
TNFRSF1A-208ENST00000536194 ZSWIM2Q8NEG5 633 aa12.37□□□□□ -0.43
TNFRSF1A-208ENST00000536194 SCFD1Q8WVM8 642 aa12.37□□□□□ -0.43
TNFRSF1A-208ENST00000536194 SNX27Q96L92 541 aa12.37□□□□□ -0.43
TNFRSF1A-208ENST00000536194 ZMAT2Q96NC0 199 aaKnown RBP12.37□□□□□ -0.43
TNFRSF1A-208ENST00000536194 ZNF558Q96NG5 402 aa12.37□□□□□ -0.43
TNFRSF1A-208ENST00000536194 ACCSQ96QU6 501 aa12.37□□□□□ -0.43
TNFRSF1A-208ENST00000536194 SLC39A2Q9NP94 309 aa12.37□□□□□ -0.43
TNFRSF1A-208ENST00000536194 AAASQ9NRG9 546 aa12.37□□□□□ -0.43
TNFRSF1A-208ENST00000536194 PCDHB13Q9Y5F0 798 aa12.37□□□□□ -0.43
TNFRSF1A-208ENST00000536194 PCDHB12Q9Y5F1 795 aa12.37□□□□□ -0.43
TNFRSF1A-208ENST00000536194 EYSQ5T1H1 3165 aa12.37□□□□□ -0.43
TNFRSF1A-208ENST00000536194 REV3LO60673 3130 aa12.36□□□□□ -0.43
TNFRSF1A-208ENST00000536194 F8W810 466 aa12.36□□□□□ -0.43
TNFRSF1A-208ENST00000536194 OGTO15294 1046 aa12.36□□□□□ -0.43
TNFRSF1A-208ENST00000536194 EIF3DO15371 548 aaKnown RBP eCLIP12.36□□□□□ -0.43
TNFRSF1A-208ENST00000536194 TGFB1I1O43294 461 aa12.36□□□□□ -0.43
TNFRSF1A-208ENST00000536194 CSPG5O95196 566 aa12.36□□□□□ -0.43
TNFRSF1A-208ENST00000536194 RPN1P04843 607 aaKnown RBP12.36□□□□□ -0.43
TNFRSF1A-208ENST00000536194 CXCL8P10145 99 aa12.36□□□□□ -0.43
TNFRSF1A-208ENST00000536194 MATR3P43243 847 aaKnown RBP eCLIP12.36□□□□□ -0.43
TNFRSF1A-208ENST00000536194 STK4Q13043 487 aa12.36□□□□□ -0.43
TNFRSF1A-208ENST00000536194 PNOCQ13519 176 aa12.36□□□□□ -0.43
TNFRSF1A-208ENST00000536194 POSTNQ15063 836 aa12.36□□□□□ -0.43
TNFRSF1A-208ENST00000536194 SLC10A6Q3KNW5 377 aa12.36□□□□□ -0.43
TNFRSF1A-208ENST00000536194 TMEM130Q8N3G9 435 aa12.36□□□□□ -0.43
TNFRSF1A-208ENST00000536194 ZNF507Q8TCN5 953 aa12.36□□□□□ -0.43
TNFRSF1A-208ENST00000536194 POF1BQ8WVV4 589 aa12.36□□□□□ -0.43
TNFRSF1A-208ENST00000536194 ERCC4Q92889 916 aaPredicted RBP12.36□□□□□ -0.43
TNFRSF1A-208ENST00000536194 ACAP3Q96P50 834 aa12.36□□□□□ -0.43
TNFRSF1A-208ENST00000536194 PPP1R10Q96QC0 940 aaKnown RBP12.36□□□□□ -0.43
TNFRSF1A-208ENST00000536194 RPS6KC1Q96S38 1066 aa12.36□□□□□ -0.43
TNFRSF1A-208ENST00000536194 PAAF1Q9BRP4 392 aa12.36□□□□□ -0.43
TNFRSF1A-208ENST00000536194 MSTO1Q9BUK6 570 aa12.36□□□□□ -0.43
TNFRSF1A-208ENST00000536194 CCDC94Q9BW85 323 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms