RNA–Protein interactions for RNA: ENST00000535643.5

LINC01089-204, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 1 (best)

Gene LINC01089, Length 1,014 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-204ENST00000535643 PPP4CP60510 307 aa13.03□□□□□ -0.32
LINC01089-204ENST00000535643 ATP2C1P98194 919 aaPredicted RBP13.03□□□□□ -0.32
LINC01089-204ENST00000535643 CDK17Q00537 523 aa13.03□□□□□ -0.32
LINC01089-204ENST00000535643 SCAPQ12770 1279 aa13.03□□□□□ -0.32
LINC01089-204ENST00000535643 PAK1Q13153 545 aa13.03□□□□□ -0.32
LINC01089-204ENST00000535643 MCM6Q14566 821 aa13.03□□□□□ -0.32
LINC01089-204ENST00000535643 KRT31Q15323 416 aa13.03□□□□□ -0.32
LINC01089-204ENST00000535643 TSR1Q2NL82 804 aaKnown RBP13.03□□□□□ -0.32
LINC01089-204ENST00000535643 ZNF658Q5TYW1 1059 aaPredicted RBP13.03□□□□□ -0.32
LINC01089-204ENST00000535643 ARL6IP4Q66PJ3 421 aaKnown RBP13.03□□□□□ -0.32
LINC01089-204ENST00000535643 ZNF572Q7Z3I7 529 aaPredicted RBP13.03□□□□□ -0.32
LINC01089-204ENST00000535643 ZNF654Q8IZM8 581 aa13.03□□□□□ -0.32
LINC01089-204ENST00000535643 FANCBQ8NB91 859 aa13.03□□□□□ -0.32
LINC01089-204ENST00000535643 CHST13Q8NET6 341 aa13.03□□□□□ -0.32
LINC01089-204ENST00000535643 KAT2BQ92831 832 aa13.03□□□□□ -0.32
LINC01089-204ENST00000535643 NUP58Q9BVL2 599 aa13.03□□□□□ -0.32
LINC01089-204ENST00000535643 TSGA10Q9BZW7 698 aa13.03□□□□□ -0.32
LINC01089-204ENST00000535643 MAGEF1Q9HAY2 307 aa13.03□□□□□ -0.32
LINC01089-204ENST00000535643 EPB41L4AQ9HCS5 686 aaPredicted RBP13.03□□□□□ -0.32
LINC01089-204ENST00000535643 ZNHIT6Q9NWK9 470 aaKnown RBP13.03□□□□□ -0.32
LINC01089-204ENST00000535643 PUF60Q9UHX1 559 aaKnown RBP13.03□□□□□ -0.32
LINC01089-204ENST00000535643 RAXQ9Y2V3 346 aa13.03□□□□□ -0.32
LINC01089-204ENST00000535643 FOCADQ5VW36 1801 aa13.03□□□□□ -0.32
LINC01089-204ENST00000535643 KANSL1LA0AUZ9 987 aa13.02□□□□□ -0.33
LINC01089-204ENST00000535643 N4BP3O15049 544 aa13.02□□□□□ -0.33
LINC01089-204ENST00000535643 IDH1O75874 414 aaKnown RBP13.02□□□□□ -0.33
LINC01089-204ENST00000535643 DDAH1O94760 285 aa13.02□□□□□ -0.33
LINC01089-204ENST00000535643 NDUFA10O95299 355 aa13.02□□□□□ -0.33
LINC01089-204ENST00000535643 CYLC1P35663 651 aaPredicted RBP13.02□□□□□ -0.33
LINC01089-204ENST00000535643 NOP2P46087 812 aaKnown RBP13.02□□□□□ -0.33
LINC01089-204ENST00000535643 KCNB1Q14721 858 aa13.02□□□□□ -0.33
LINC01089-204ENST00000535643 E2F4Q16254 413 aa13.02□□□□□ -0.33
LINC01089-204ENST00000535643 MEA1Q16626 185 aa13.02□□□□□ -0.33
LINC01089-204ENST00000535643 TTC31Q49AM3 519 aaPredicted RBP13.02□□□□□ -0.33
LINC01089-204ENST00000535643 PDE12Q6L8Q7 609 aaKnown RBP13.02□□□□□ -0.33
LINC01089-204ENST00000535643 CMTR2Q8IYT2 770 aaKnown RBP13.02□□□□□ -0.33
LINC01089-204ENST00000535643 CCDC170Q8IYT3 715 aa13.02□□□□□ -0.33
LINC01089-204ENST00000535643 OR8K1Q8NGG5 319 aa13.02□□□□□ -0.33
LINC01089-204ENST00000535643 GPR20Q99678 358 aa13.02□□□□□ -0.33
LINC01089-204ENST00000535643 THAP9Q9H5L6 903 aa13.02□□□□□ -0.33
LINC01089-204ENST00000535643 RAVER2Q9HCJ3 691 aaKnown RBP13.02□□□□□ -0.33
LINC01089-204ENST00000535643 RSPH14Q9UHP6 348 aa13.02□□□□□ -0.33
LINC01089-204ENST00000535643 EPN1Q9Y6I3 576 aaPredicted RBP13.02□□□□□ -0.33
LINC01089-204ENST00000535643 URB1O60287 2271 aaKnown RBP13.02□□□□□ -0.33
LINC01089-204ENST00000535643 DENND4AQ7Z401 1863 aa13.02□□□□□ -0.33
LINC01089-204ENST00000535643 LGALS16A8MUM7 142 aa13.01□□□□□ -0.33
LINC01089-204ENST00000535643 GSG1L2A8MUP6 293 aa13.01□□□□□ -0.33
LINC01089-204ENST00000535643 F5H6K3 240 aa13.01□□□□□ -0.33
LINC01089-204ENST00000535643 KRT86O43790 486 aa13.01□□□□□ -0.33
LINC01089-204ENST00000535643 PRPF6O94906 941 aaKnown RBP13.01□□□□□ -0.33
LINC01089-204ENST00000535643 WISP1O95388 367 aa13.01□□□□□ -0.33
LINC01089-204ENST00000535643 ZNF806P0C7X5 589 aa13.01□□□□□ -0.33
LINC01089-204ENST00000535643 RXRAP19793 462 aa13.01□□□□□ -0.33
LINC01089-204ENST00000535643 GRIN1Q05586 938 aa13.01□□□□□ -0.33
LINC01089-204ENST00000535643 NONOQ15233 471 aaKnown RBP eCLIP13.01□□□□□ -0.333e-7■■■■□ 20.1
LINC01089-204ENST00000535643 TCP11X2Q5H9J9 407 aa13.01□□□□□ -0.33
LINC01089-204ENST00000535643 FIGNQ5HY92 759 aa13.01□□□□□ -0.33
LINC01089-204ENST00000535643 COLEC12Q5KU26 742 aa13.01□□□□□ -0.33
LINC01089-204ENST00000535643 FAM83BQ5T0W9 1011 aa13.01□□□□□ -0.33
LINC01089-204ENST00000535643 RNF43Q68DV7 783 aa13.01□□□□□ -0.33
LINC01089-204ENST00000535643 CCDC149Q6ZUS6 474 aa13.01□□□□□ -0.33
LINC01089-204ENST00000535643 SPATS2Q86XZ4 545 aaKnown RBP13.01□□□□□ -0.33
LINC01089-204ENST00000535643 AMOTL1Q8IY63 956 aa13.01□□□□□ -0.33
LINC01089-204ENST00000535643 C7orf31Q8N865 590 aa13.01□□□□□ -0.33
LINC01089-204ENST00000535643 COG1Q8WTW3 980 aa13.01□□□□□ -0.33
LINC01089-204ENST00000535643 AFG1LQ8WV93 481 aa13.01□□□□□ -0.33
LINC01089-204ENST00000535643 ESR2Q92731 530 aa13.01□□□□□ -0.33
LINC01089-204ENST00000535643 APBB2Q92870 758 aa13.01□□□□□ -0.33
LINC01089-204ENST00000535643 COPS5Q92905 334 aa13.01□□□□□ -0.33
LINC01089-204ENST00000535643 NUP88Q99567 741 aaPredicted RBP13.01□□□□□ -0.33
LINC01089-204ENST00000535643 BCAS3Q9H6U6 928 aa13.01□□□□□ -0.33
LINC01089-204ENST00000535643 SENP2Q9HC62 589 aa13.01□□□□□ -0.33
LINC01089-204ENST00000535643 ARHGEF10LQ9HCE6 1279 aa13.01□□□□□ -0.33
LINC01089-204ENST00000535643 A1CFQ9NQ94 594 aaKnown RBP13.01□□□□□ -0.33
LINC01089-204ENST00000535643 HOMER2Q9NSB8 354 aa13.01□□□□□ -0.33
LINC01089-204ENST00000535643 HPCAL4Q9UM19 191 aa13.01□□□□□ -0.33
LINC01089-204ENST00000535643 GREB1Q4ZG55 1949 aa13□□□□□ -0.33
LINC01089-204ENST00000535643 A0A087WUV0 522 aaPredicted RBP13□□□□□ -0.33
LINC01089-204ENST00000535643 KCNJ18B7U540 433 aa13□□□□□ -0.33
LINC01089-204ENST00000535643 TREHO43280 583 aa13□□□□□ -0.33
LINC01089-204ENST00000535643 RNF40O75150 1001 aa13□□□□□ -0.33
LINC01089-204ENST00000535643 MBD4O95243 580 aa13□□□□□ -0.33
LINC01089-204ENST00000535643 CEACAM1P13688 526 aa13□□□□□ -0.33
LINC01089-204ENST00000535643 PRLRP16471 622 aa13□□□□□ -0.33
LINC01089-204ENST00000535643 TNFRSF8P28908 595 aa13□□□□□ -0.33
LINC01089-204ENST00000535643 KRT9P35527 623 aa13□□□□□ -0.33
LINC01089-204ENST00000535643 LONP1P36776 959 aaKnown RBP13□□□□□ -0.33
LINC01089-204ENST00000535643 STIM1Q13586 685 aa13□□□□□ -0.33
LINC01089-204ENST00000535643 KCNJ12Q14500 433 aa13□□□□□ -0.33
LINC01089-204ENST00000535643 UBXN2BQ14CS0 331 aa13□□□□□ -0.33
LINC01089-204ENST00000535643 SEC23AQ15436 765 aa13□□□□□ -0.33
LINC01089-204ENST00000535643 DNAJC21Q5F1R6 531 aaKnown RBP13□□□□□ -0.33
LINC01089-204ENST00000535643 TTC38Q5R3I4 469 aa13□□□□□ -0.33
LINC01089-204ENST00000535643 LRRC31Q6UY01 552 aa13□□□□□ -0.33
LINC01089-204ENST00000535643 ADGRA1Q86SQ6 560 aa13□□□□□ -0.33
LINC01089-204ENST00000535643 C10orf67Q8IYJ2 551 aa13□□□□□ -0.33
LINC01089-204ENST00000535643 SPATA5Q8NB90 893 aa13□□□□□ -0.33
LINC01089-204ENST00000535643 ACRBPQ8NEB7 543 aa13□□□□□ -0.33
LINC01089-204ENST00000535643 TNFRSF25Q93038 417 aa13□□□□□ -0.33
LINC01089-204ENST00000535643 SHDQ96IW2 340 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms