RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 SLC16A11Q8NCK7 471 aa6.86□□□□□ -1.31
PRKDC-205ENST00000535375 C1orf162Q8NEQ5 155 aaPredicted RBP6.86□□□□□ -1.31
PRKDC-205ENST00000535375 FBXO18Q8NFZ0 1043 aa6.86□□□□□ -1.31
PRKDC-205ENST00000535375 OR10H5Q8NGA6 315 aa6.86□□□□□ -1.31
PRKDC-205ENST00000535375 ZFP28Q8NHY6 868 aa6.86□□□□□ -1.31
PRKDC-205ENST00000535375 ZNF483Q8TF39 744 aaPredicted RBP6.86□□□□□ -1.31
PRKDC-205ENST00000535375 CCDC8Q9H0W5 538 aaPredicted RBP6.86□□□□□ -1.31
PRKDC-205ENST00000535375 LANCL2Q9NS86 450 aa6.86□□□□□ -1.31
PRKDC-205ENST00000535375 MOCS1Q9NZB8 636 aa6.86□□□□□ -1.31
PRKDC-205ENST00000535375 ANKRD62A6NC57 917 aa6.85□□□□□ -1.31
PRKDC-205ENST00000535375 TRIM24O15164 1050 aa6.85□□□□□ -1.31
PRKDC-205ENST00000535375 SNRPA1P09661 255 aaKnown RBP6.85□□□□□ -1.31
PRKDC-205ENST00000535375 RBP3P10745 1247 aa6.85□□□□□ -1.31
PRKDC-205ENST00000535375 IL2RBP14784 551 aa6.85□□□□□ -1.31
PRKDC-205ENST00000535375 MAKP20794 623 aa6.85□□□□□ -1.31
PRKDC-205ENST00000535375 SREBF1P36956 1147 aa6.85□□□□□ -1.31
PRKDC-205ENST00000535375 PPP3CAQ08209 521 aa6.85□□□□□ -1.31
PRKDC-205ENST00000535375 MGAT2Q10469 447 aa6.85□□□□□ -1.31
PRKDC-205ENST00000535375 PTPROQ16827 1216 aa6.85□□□□□ -1.31
PRKDC-205ENST00000535375 BMT2Q1RMZ1 405 aa6.85□□□□□ -1.31
PRKDC-205ENST00000535375 INAVAQ3KP66 663 aa6.85□□□□□ -1.31
PRKDC-205ENST00000535375 RRP12Q5JTH9 1297 aaKnown RBP6.85□□□□□ -1.31
PRKDC-205ENST00000535375 MFSD14BQ5SR56 506 aa6.85□□□□□ -1.31
PRKDC-205ENST00000535375 DRICH1Q6PGQ1 229 aaPredicted RBP6.85□□□□□ -1.31
PRKDC-205ENST00000535375 GPRIN1Q7Z2K8 1008 aa6.85□□□□□ -1.31
PRKDC-205ENST00000535375 ZNF572Q7Z3I7 529 aaPredicted RBP6.85□□□□□ -1.31
PRKDC-205ENST00000535375 SYNE4Q8N205 404 aa6.85□□□□□ -1.31
PRKDC-205ENST00000535375 ZNF276Q8N554 614 aa6.85□□□□□ -1.31
PRKDC-205ENST00000535375 SLC25A43Q8WUT9 341 aaPredicted RBP6.85□□□□□ -1.31
PRKDC-205ENST00000535375 STON2Q8WXE9 905 aa6.85□□□□□ -1.31
PRKDC-205ENST00000535375 C7orf25Q9BPX7 421 aa6.85□□□□□ -1.31
PRKDC-205ENST00000535375 SLC2A4RGQ9NR83 387 aa6.85□□□□□ -1.31
PRKDC-205ENST00000535375 TMEM140Q9NV12 185 aa6.85□□□□□ -1.31
PRKDC-205ENST00000535375 SHTN1A0MZ66 631 aa6.84□□□□□ -1.31
PRKDC-205ENST00000535375 CYR61O00622 381 aa6.84□□□□□ -1.31
PRKDC-205ENST00000535375 PJA2O43164 708 aa6.84□□□□□ -1.31
PRKDC-205ENST00000535375 NARSO43776 548 aaKnown RBP6.84□□□□□ -1.31
PRKDC-205ENST00000535375 RPS6KA4O75676 772 aa6.84□□□□□ -1.31
PRKDC-205ENST00000535375 ADH4P08319 380 aa6.84□□□□□ -1.31
PRKDC-205ENST00000535375 RAP2AP10114 183 aa6.84□□□□□ -1.31
PRKDC-205ENST00000535375 CCND1P24385 295 aa6.84□□□□□ -1.31
PRKDC-205ENST00000535375 ACVRL1P37023 503 aa6.84□□□□□ -1.31
PRKDC-205ENST00000535375 SLC16A1P53985 500 aa6.84□□□□□ -1.31
PRKDC-205ENST00000535375 CLRN1P58418 232 aa6.84□□□□□ -1.31
PRKDC-205ENST00000535375 SLC25A3Q00325 362 aa6.84□□□□□ -1.31
PRKDC-205ENST00000535375 SP140Q13342 867 aa6.84□□□□□ -1.31
PRKDC-205ENST00000535375 PNMA8AQ86V59 439 aaPredicted RBP6.84□□□□□ -1.31
PRKDC-205ENST00000535375 CBARPQ8N350 705 aaPredicted RBP6.84□□□□□ -1.31
PRKDC-205ENST00000535375 RNF169Q8NCN4 708 aa6.84□□□□□ -1.31
PRKDC-205ENST00000535375 CYFIP2Q96F07 1278 aa6.84□□□□□ -1.31
PRKDC-205ENST00000535375 DCLRE1CQ96SD1 692 aaKnown RBP6.84□□□□□ -1.31
PRKDC-205ENST00000535375 KCNH6Q9H252 994 aa6.84□□□□□ -1.31
PRKDC-205ENST00000535375 LDAHQ9H6V9 325 aa6.84□□□□□ -1.31
PRKDC-205ENST00000535375 MANSC1Q9H8J5 431 aa6.84□□□□□ -1.31
PRKDC-205ENST00000535375 MMRN2Q9H8L6 949 aa6.84□□□□□ -1.31
PRKDC-205ENST00000535375 INTUQ9ULD6 942 aa6.84□□□□□ -1.31
PRKDC-205ENST00000535375 CXorf49A8MYA2 514 aaPredicted RBP6.83□□□□□ -1.32
PRKDC-205ENST00000535375 AKAP8O43823 692 aaKnown RBP6.83□□□□□ -1.32
PRKDC-205ENST00000535375 APOBEC3AP31941 199 aaPredicted RBP6.83□□□□□ -1.32
PRKDC-205ENST00000535375 PTGS2P35354 604 aa6.83□□□□□ -1.32
PRKDC-205ENST00000535375 NHLH2Q02577 135 aa6.83□□□□□ -1.32
PRKDC-205ENST00000535375 ATXN7L2Q5T6C5 722 aaPredicted RBP6.83□□□□□ -1.32
PRKDC-205ENST00000535375 ZFPM1Q8IX07 1006 aa6.83□□□□□ -1.32
PRKDC-205ENST00000535375 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.83□□□□□ -1.32
PRKDC-205ENST00000535375 CCHCR1Q8TD31 782 aa6.83□□□□□ -1.32
PRKDC-205ENST00000535375 NRG4Q8WWG1 115 aa6.83□□□□□ -1.32
PRKDC-205ENST00000535375 HAS1Q92839 578 aa6.83□□□□□ -1.32
PRKDC-205ENST00000535375 PHACTR3Q96KR7 559 aa6.83□□□□□ -1.32
PRKDC-205ENST00000535375 SCAND2PQ9GZW5 306 aaPredicted RBP6.83□□□□□ -1.32
PRKDC-205ENST00000535375 NRDE2Q9H7Z3 1164 aa6.83□□□□□ -1.32
PRKDC-205ENST00000535375 TRPM5Q9NZQ8 1165 aa6.83□□□□□ -1.32
PRKDC-205ENST00000535375 AJAP1Q9UKB5 411 aaPredicted RBP6.83□□□□□ -1.32
PRKDC-205ENST00000535375 WASHC2CQ9Y4E1 1318 aa6.82□□□□□ -1.32
PRKDC-205ENST00000535375 GRXCR1A8MXD5 290 aa6.82□□□□□ -1.32
PRKDC-205ENST00000535375 TEX33O43247 280 aa6.82□□□□□ -1.32
PRKDC-205ENST00000535375 NDUFS2O75306 463 aa6.82□□□□□ -1.32
PRKDC-205ENST00000535375 PPFIA4O75335 1185 aa6.82□□□□□ -1.32
PRKDC-205ENST00000535375 ALOX15P16050 662 aaPredicted RBP6.82□□□□□ -1.32
PRKDC-205ENST00000535375 ATP5JP18859 108 aa6.82□□□□□ -1.32
PRKDC-205ENST00000535375 RAP2BP61225 183 aa6.82□□□□□ -1.32
PRKDC-205ENST00000535375 AFMIDQ63HM1 303 aa6.82□□□□□ -1.32
PRKDC-205ENST00000535375 MIGA2Q7L4E1 593 aa6.82□□□□□ -1.32
PRKDC-205ENST00000535375 SLC35B2Q8TB61 432 aa6.82□□□□□ -1.32
PRKDC-205ENST00000535375 JADE3Q92613 823 aa6.82□□□□□ -1.32
PRKDC-205ENST00000535375 DPF2Q92785 391 aa6.82□□□□□ -1.32
PRKDC-205ENST00000535375 HOXB13Q92826 284 aaPredicted RBP6.82□□□□□ -1.32
PRKDC-205ENST00000535375 CLIP3Q96DZ5 547 aa6.82□□□□□ -1.32
PRKDC-205ENST00000535375 FUBP3Q96I24 572 aaKnown RBP eCLIP6.82□□□□□ -1.32
PRKDC-205ENST00000535375 MRI1Q9BV20 369 aa6.82□□□□□ -1.32
PRKDC-205ENST00000535375 HOMER2Q9NSB8 354 aa6.82□□□□□ -1.32
PRKDC-205ENST00000535375 GABRDO14764 452 aa6.81□□□□□ -1.32
PRKDC-205ENST00000535375 RNASE9P60153 205 aaKnown RBP6.81□□□□□ -1.32
PRKDC-205ENST00000535375 SEPT2Q15019 361 aa6.81□□□□□ -1.32
PRKDC-205ENST00000535375 PTPN21Q16825 1174 aa6.81□□□□□ -1.32
PRKDC-205ENST00000535375 FNDC7Q5VTL7 733 aa6.81□□□□□ -1.32
PRKDC-205ENST00000535375 IGFL4Q6B9Z1 124 aa6.81□□□□□ -1.32
PRKDC-205ENST00000535375 RHOT1Q8IXI2 618 aa6.81□□□□□ -1.32
PRKDC-205ENST00000535375 FAM177A1Q8N128 213 aaPredicted RBP6.81□□□□□ -1.32
PRKDC-205ENST00000535375 SMAD5Q99717 465 aaKnown RBP6.81□□□□□ -1.32
PRKDC-205ENST00000535375 BRINP2Q9C0B6 783 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms