RNA–Protein interactions for RNA: ENST00000535222.5

CPSF7-214, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-214ENST00000535222 MRPS23Q9Y3D9 190 aaKnown RBP8.53□□□□□ -1.04
CPSF7-214ENST00000535222 UBIAD1Q9Y5Z9 338 aa8.53□□□□□ -1.04
CPSF7-214ENST00000535222 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.52□□□□□ -1.05
CPSF7-214ENST00000535222 PIK3CDO00329 1044 aa8.52□□□□□ -1.05
CPSF7-214ENST00000535222 DCLK1O15075 740 aa8.52□□□□□ -1.05
CPSF7-214ENST00000535222 CCL16O15467 120 aa8.52□□□□□ -1.05
CPSF7-214ENST00000535222 ATG13O75143 517 aa8.52□□□□□ -1.05
CPSF7-214ENST00000535222 MAFO75444 373 aaPredicted RBP8.52□□□□□ -1.05
CPSF7-214ENST00000535222 CD59P13987 128 aa8.52□□□□□ -1.05
CPSF7-214ENST00000535222 ATP4AP20648 1035 aa8.52□□□□□ -1.05
CPSF7-214ENST00000535222 RAB27AP51159 221 aa8.52□□□□□ -1.05
CPSF7-214ENST00000535222 ACTR2P61160 394 aa8.52□□□□□ -1.05
CPSF7-214ENST00000535222 FCHO2Q0JRZ9 810 aa8.52□□□□□ -1.05
CPSF7-214ENST00000535222 SLC14A1Q13336 389 aa8.52□□□□□ -1.05
CPSF7-214ENST00000535222 SERINC3Q13530 473 aa8.52□□□□□ -1.05
CPSF7-214ENST00000535222 TRIP6Q15654 476 aaKnown RBP8.52□□□□□ -1.05
CPSF7-214ENST00000535222 ZMYM1Q5SVZ6 1142 aa8.52□□□□□ -1.05
CPSF7-214ENST00000535222 LIN9Q5TKA1 542 aa8.52□□□□□ -1.05
CPSF7-214ENST00000535222 PEAR1Q5VY43 1037 aaPredicted RBP8.52□□□□□ -1.05
CPSF7-214ENST00000535222 ZNF746Q6NUN9 644 aaPredicted RBP8.52□□□□□ -1.05
CPSF7-214ENST00000535222 PKN3Q6P5Z2 889 aa8.52□□□□□ -1.05
CPSF7-214ENST00000535222 TOGARAM2Q6ZUX3 1019 aa8.52□□□□□ -1.05
CPSF7-214ENST00000535222 GPR155Q7Z3F1 870 aa8.52□□□□□ -1.05
CPSF7-214ENST00000535222 PIP4K2CQ8TBX8 421 aa8.52□□□□□ -1.05
CPSF7-214ENST00000535222 URGCPQ8TCY9 931 aa8.52□□□□□ -1.05
CPSF7-214ENST00000535222 PPP1R16BQ96T49 567 aa8.52□□□□□ -1.05
CPSF7-214ENST00000535222 CLSTN3Q9BQT9 956 aa8.52□□□□□ -1.05
CPSF7-214ENST00000535222 GPR62Q9BZJ7 368 aa8.52□□□□□ -1.05
CPSF7-214ENST00000535222 MRS2Q9HD23 443 aa8.52□□□□□ -1.05
CPSF7-214ENST00000535222 FAM105AQ9NUU6 356 aa8.52□□□□□ -1.05
CPSF7-214ENST00000535222 IL17BQ9UHF5 180 aa8.52□□□□□ -1.05
CPSF7-214ENST00000535222 INPP5FQ9Y2H2 1132 aa8.52□□□□□ -1.05
CPSF7-214ENST00000535222 FBN3Q75N90 2809 aa8.52□□□□□ -1.05
CPSF7-214ENST00000535222 NFASCO94856 1347 aa8.52□□□□□ -1.05
CPSF7-214ENST00000535222 LRBAP50851 2863 aa8.51□□□□□ -1.05
CPSF7-214ENST00000535222 SPTBN1Q01082 2364 aaKnown RBP8.51□□□□□ -1.05
CPSF7-214ENST00000535222 CSMD1Q96PZ7 3565 aa8.51□□□□□ -1.05
CPSF7-214ENST00000535222 ZMYM2Q9UBW7 1377 aa8.51□□□□□ -1.05
CPSF7-214ENST00000535222 TRABD2BA6NFA1 517 aa8.51□□□□□ -1.05
CPSF7-214ENST00000535222 E9PAM4 449 aa8.51□□□□□ -1.05
CPSF7-214ENST00000535222 SPECC1L-ADORA2AF8WAN1 911 aa8.51□□□□□ -1.05
CPSF7-214ENST00000535222 MEIS2O14770 477 aa8.51□□□□□ -1.05
CPSF7-214ENST00000535222 ZNF263O14978 683 aa8.51□□□□□ -1.05
CPSF7-214ENST00000535222 CHADO15335 359 aa8.51□□□□□ -1.05
CPSF7-214ENST00000535222 MAGEB2O15479 319 aa8.51□□□□□ -1.05
CPSF7-214ENST00000535222 RHOP08100 348 aa8.51□□□□□ -1.05
CPSF7-214ENST00000535222 PARP1P09874 1014 aaKnown RBP8.51□□□□□ -1.05
CPSF7-214ENST00000535222 ENGP17813 658 aa8.51□□□□□ -1.05
CPSF7-214ENST00000535222 ITPKBP27987 946 aa8.51□□□□□ -1.05
CPSF7-214ENST00000535222 CTHP32929 405 aa8.51□□□□□ -1.05
CPSF7-214ENST00000535222 EIF2S3P41091 472 aaKnown RBP8.51□□□□□ -1.05
CPSF7-214ENST00000535222 MTMR1Q13613 665 aa8.51□□□□□ -1.05
CPSF7-214ENST00000535222 SLC35G1Q2M3R5 365 aa8.51□□□□□ -1.05
CPSF7-214ENST00000535222 CCDC178Q5BJE1 867 aa8.51□□□□□ -1.05
CPSF7-214ENST00000535222 TRIM61Q5EBN2 209 aa8.51□□□□□ -1.05
CPSF7-214ENST00000535222 ABHD15Q6UXT9 468 aa8.51□□□□□ -1.05
CPSF7-214ENST00000535222 TMC8Q8IU68 726 aa8.51□□□□□ -1.05
CPSF7-214ENST00000535222 ING5Q8WYH8 240 aa8.51□□□□□ -1.05
CPSF7-214ENST00000535222 SMARCD2Q92925 531 aa8.51□□□□□ -1.05
CPSF7-214ENST00000535222 PGBD4Q96DM1 585 aa8.51□□□□□ -1.05
CPSF7-214ENST00000535222 FCRL3Q96P31 734 aaPredicted RBP8.51□□□□□ -1.05
CPSF7-214ENST00000535222 PI4K2AQ9BTU6 479 aa8.51□□□□□ -1.05
CPSF7-214ENST00000535222 APOL6Q9BWW8 343 aa8.51□□□□□ -1.05
CPSF7-214ENST00000535222 RIOX1Q9H6W3 641 aa8.51□□□□□ -1.05
CPSF7-214ENST00000535222 DNAAF2Q9NVR5 837 aaKnown RBP8.51□□□□□ -1.05
CPSF7-214ENST00000535222 ANKMY1Q9P2S6 941 aa8.51□□□□□ -1.05
CPSF7-214ENST00000535222 SEPT9Q9UHD8 586 aaPredicted RBP8.51□□□□□ -1.05
CPSF7-214ENST00000535222 MBD1Q9UIS9 605 aaPredicted RBP8.51□□□□□ -1.05
CPSF7-214ENST00000535222 SLC8A2Q9UPR5 921 aa8.51□□□□□ -1.05
CPSF7-214ENST00000535222 TSC2P49815 1807 aa8.51□□□□□ -1.05
CPSF7-214ENST00000535222 CNTNAP2Q9UHC6 1331 aa8.51□□□□□ -1.05
CPSF7-214ENST00000535222 CENPEQ02224 2701 aa8.51□□□□□ -1.05
CPSF7-214ENST00000535222 COL5A1P20908 1838 aaPredicted RBP8.5□□□□□ -1.05
CPSF7-214ENST00000535222 WDR27A2RRH5 827 aa8.5□□□□□ -1.05
CPSF7-214ENST00000535222 PYCARD-AS1I3L0S3 204 aa8.5□□□□□ -1.05
CPSF7-214ENST00000535222 C6P13671 934 aa8.5□□□□□ -1.05
CPSF7-214ENST00000535222 CEBPBP17676 345 aa8.5□□□□□ -1.05
CPSF7-214ENST00000535222 RPL17P18621 184 aaKnown RBP8.5□□□□□ -1.05
CPSF7-214ENST00000535222 GPC3P51654 580 aa8.5□□□□□ -1.05
CPSF7-214ENST00000535222 CYP2U1Q7Z449 544 aa8.5□□□□□ -1.05
CPSF7-214ENST00000535222 SLCO6A1Q86UG4 719 aa8.5□□□□□ -1.05
CPSF7-214ENST00000535222 STAG2Q8N3U4 1231 aa8.5□□□□□ -1.05
CPSF7-214ENST00000535222 PNPLA1Q8N8W4 532 aa8.5□□□□□ -1.05
CPSF7-214ENST00000535222 E2F7Q96AV8 911 aa8.5□□□□□ -1.05
CPSF7-214ENST00000535222 FAM193BQ96PV7 902 aaPredicted RBP8.5□□□□□ -1.05
CPSF7-214ENST00000535222 NUSAP1Q9BXS6 441 aaKnown RBP8.5□□□□□ -1.05
CPSF7-214ENST00000535222 ZMYM6O95789 1325 aa8.5□□□□□ -1.05
CPSF7-214ENST00000535222 THADAQ6YHU6 1953 aa8.5□□□□□ -1.05
CPSF7-214ENST00000535222 UTP20O75691 2785 aaKnown RBP8.5□□□□□ -1.05
CPSF7-214ENST00000535222 TRIM6-TRIM34B2RNG4 842 aa8.49□□□□□ -1.05
CPSF7-214ENST00000535222 KLRF2D3W0D1 207 aa8.49□□□□□ -1.05
CPSF7-214ENST00000535222 TNFRSF10BO14763 440 aa8.49□□□□□ -1.05
CPSF7-214ENST00000535222 DHX16O60231 1041 aaKnown RBP8.49□□□□□ -1.05
CPSF7-214ENST00000535222 CBFA2T3O75081 653 aa8.49□□□□□ -1.05
CPSF7-214ENST00000535222 GJB3O75712 270 aa8.49□□□□□ -1.05
CPSF7-214ENST00000535222 FGFR4P22455 802 aa8.49□□□□□ -1.05
CPSF7-214ENST00000535222 HOXD12P35452 270 aa8.49□□□□□ -1.05
CPSF7-214ENST00000535222 DPP6P42658 865 aa8.49□□□□□ -1.05
CPSF7-214ENST00000535222 SOX9P48436 509 aa8.49□□□□□ -1.05
CPSF7-214ENST00000535222 CDC42EP1Q00587 391 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms