RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 AUTS2Q8WXX7 1259 aa4.75□□□□□ -1.65
USP48-215ENST00000534705 SSH1Q8WYL5 1049 aa4.75□□□□□ -1.65
USP48-215ENST00000534705 LENG9Q96B70 501 aa4.75□□□□□ -1.65
USP48-215ENST00000534705 EAF2Q96CJ1 260 aaPredicted RBP4.75□□□□□ -1.65
USP48-215ENST00000534705 RPL10LQ96L21 214 aaKnown RBP4.75□□□□□ -1.65
USP48-215ENST00000534705 FAM126AQ9BYI3 521 aaPredicted RBP4.75□□□□□ -1.65
USP48-215ENST00000534705 PRDM12Q9H4Q4 367 aa4.75□□□□□ -1.65
USP48-215ENST00000534705 ATP8A1Q9Y2Q0 1164 aa4.75□□□□□ -1.65
USP48-215ENST00000534705 SH3BP1Q9Y3L3 701 aa4.75□□□□□ -1.65
USP48-215ENST00000534705 KIAA0586Q9BVV6 1533 aa4.75□□□□□ -1.65
USP48-215ENST00000534705 INO80B-WBP1J3KQ70 363 aa4.74□□□□□ -1.65
USP48-215ENST00000534705 GYPEP15421 78 aa4.74□□□□□ -1.65
USP48-215ENST00000534705 ITGB6P18564 788 aa4.74□□□□□ -1.65
USP48-215ENST00000534705 SCNN1GP51170 649 aa4.74□□□□□ -1.65
USP48-215ENST00000534705 NPEPPSP55786 919 aa4.74□□□□□ -1.65
USP48-215ENST00000534705 LGALS4P56470 323 aa4.74□□□□□ -1.65
USP48-215ENST00000534705 MUM1Q2TAK8 710 aa4.74□□□□□ -1.65
USP48-215ENST00000534705 STRIP1Q5VSL9 837 aa4.74□□□□□ -1.65
USP48-215ENST00000534705 HTR3DQ70Z44 454 aa4.74□□□□□ -1.65
USP48-215ENST00000534705 BHLHA9Q7RTU4 235 aa4.74□□□□□ -1.65
USP48-215ENST00000534705 KCNK18Q7Z418 384 aa4.74□□□□□ -1.65
USP48-215ENST00000534705 APBB1IPQ7Z5R6 666 aaPredicted RBP4.74□□□□□ -1.65
USP48-215ENST00000534705 DDX42Q86XP3 938 aaKnown RBP eCLIP4.74□□□□□ -1.65
USP48-215ENST00000534705 SLC25A43Q8WUT9 341 aaPredicted RBP4.74□□□□□ -1.65
USP48-215ENST00000534705 PDCD2LQ9BRP1 358 aa4.74□□□□□ -1.65
USP48-215ENST00000534705 INO80BQ9C086 356 aaPredicted RBP4.74□□□□□ -1.65
USP48-215ENST00000534705 BRINP2Q9C0B6 783 aa4.74□□□□□ -1.65
USP48-215ENST00000534705 VTA1Q9NP79 307 aa4.74□□□□□ -1.65
USP48-215ENST00000534705 C14orf119Q9NWQ9 140 aa4.74□□□□□ -1.65
USP48-215ENST00000534705 WASHC2AQ641Q2 1341 aa4.73□□□□□ -1.65
USP48-215ENST00000534705 KIAA0556O60303 1618 aa4.73□□□□□ -1.65
USP48-215ENST00000534705 TRIM75PA6NK02 468 aa4.73□□□□□ -1.65
USP48-215ENST00000534705 GOLGA8AA7E2F4 631 aa4.73□□□□□ -1.65
USP48-215ENST00000534705 PHF2O75151 1096 aa4.73□□□□□ -1.65
USP48-215ENST00000534705 IPO13O94829 963 aaKnown RBP4.73□□□□□ -1.65
USP48-215ENST00000534705 LPLP06858 475 aa4.73□□□□□ -1.65
USP48-215ENST00000534705 GPR3P46089 330 aa4.73□□□□□ -1.65
USP48-215ENST00000534705 KRTAP10-9P60411 292 aa4.73□□□□□ -1.65
USP48-215ENST00000534705 DUSP2Q05923 314 aa4.73□□□□□ -1.65
USP48-215ENST00000534705 TOB2Q14106 344 aaPredicted RBP4.73□□□□□ -1.65
USP48-215ENST00000534705 PTPAQ15257 358 aa4.73□□□□□ -1.65
USP48-215ENST00000534705 DCAF17Q5H9S7 520 aaPredicted RBP4.73□□□□□ -1.65
USP48-215ENST00000534705 METTL24Q5JXM2 366 aa4.73□□□□□ -1.65
USP48-215ENST00000534705 COLEC12Q5KU26 742 aa4.73□□□□□ -1.65
USP48-215ENST00000534705 LY6G5CQ5SRR4 150 aa4.73□□□□□ -1.65
USP48-215ENST00000534705 FKBP15Q5T1M5 1219 aa4.73□□□□□ -1.65
USP48-215ENST00000534705 BTNL9Q6UXG8 535 aa4.73□□□□□ -1.65
USP48-215ENST00000534705 ADGRG3Q86Y34 549 aa4.73□□□□□ -1.65
USP48-215ENST00000534705 MSL3Q8N5Y2 521 aaKnown RBP4.73□□□□□ -1.65
USP48-215ENST00000534705 ZCRB1Q8TBF4 217 aaKnown RBP4.73□□□□□ -1.65
USP48-215ENST00000534705 NTN5Q8WTR8 489 aaPredicted RBP4.73□□□□□ -1.65
USP48-215ENST00000534705 TSPEARQ8WU66 669 aa4.73□□□□□ -1.65
USP48-215ENST00000534705 SNX33Q8WV41 574 aa4.73□□□□□ -1.65
USP48-215ENST00000534705 ARL8AQ96BM9 186 aa4.73□□□□□ -1.65
USP48-215ENST00000534705 ZNF512Q96ME7 567 aaPredicted RBP4.73□□□□□ -1.65
USP48-215ENST00000534705 CCM2LQ9NUG4 571 aaPredicted RBP4.73□□□□□ -1.65
USP48-215ENST00000534705 ING3Q9NXR8 418 aa4.73□□□□□ -1.65
USP48-215ENST00000534705 CARMIL1Q5VZK9 1371 aa4.73□□□□□ -1.65
USP48-215ENST00000534705 PRXQ9BXM0 1461 aa4.73□□□□□ -1.65
USP48-215ENST00000534705 RAPGEF2Q9Y4G8 1499 aa4.73□□□□□ -1.65
USP48-215ENST00000534705 DISP1Q96F81 1524 aa4.72□□□□□ -1.65
USP48-215ENST00000534705 UGGT2Q9NYU1 1516 aa4.72□□□□□ -1.65
USP48-215ENST00000534705 KIF21BO75037 1637 aa4.72□□□□□ -1.65
USP48-215ENST00000534705 GASTP01350 101 aa4.72□□□□□ -1.65
USP48-215ENST00000534705 CTSSP25774 331 aa4.72□□□□□ -1.65
USP48-215ENST00000534705 MTNR1BP49286 362 aa4.72□□□□□ -1.65
USP48-215ENST00000534705 SLC5A3P53794 718 aa4.72□□□□□ -1.65
USP48-215ENST00000534705 KLF1Q13351 362 aaPredicted RBP4.72□□□□□ -1.65
USP48-215ENST00000534705 MRPL49Q13405 166 aaKnown RBP4.72□□□□□ -1.65
USP48-215ENST00000534705 ACAP1Q15027 740 aa4.72□□□□□ -1.65
USP48-215ENST00000534705 UBE3CQ15386 1083 aa4.72□□□□□ -1.65
USP48-215ENST00000534705 ADRM1Q16186 407 aa4.72□□□□□ -1.65
USP48-215ENST00000534705 Q6ZRM9 215 aa4.72□□□□□ -1.65
USP48-215ENST00000534705 DOK3Q7L591 496 aa4.72□□□□□ -1.65
USP48-215ENST00000534705 MDGA1Q8NFP4 955 aa4.72□□□□□ -1.65
USP48-215ENST00000534705 COG1Q8WTW3 980 aa4.72□□□□□ -1.65
USP48-215ENST00000534705 ZNF480Q8WV37 535 aa4.72□□□□□ -1.65
USP48-215ENST00000534705 IL17RAQ96F46 866 aa4.72□□□□□ -1.65
USP48-215ENST00000534705 BBC3Q96PG8 261 aaPredicted RBP4.72□□□□□ -1.65
USP48-215ENST00000534705 QRSL1Q9H0R6 528 aaKnown RBP4.72□□□□□ -1.65
USP48-215ENST00000534705 SLC5A4Q9NY91 659 aa4.72□□□□□ -1.65
USP48-215ENST00000534705 DPP7Q9UHL4 492 aa4.72□□□□□ -1.65
USP48-215ENST00000534705 SCOCQ9UIL1 159 aa4.72□□□□□ -1.65
USP48-215ENST00000534705 TSPOAP1O95153 1857 aa4.72□□□□□ -1.65
USP48-215ENST00000534705 PRG4Q92954 1404 aaPredicted RBP4.72□□□□□ -1.65
USP48-215ENST00000534705 XDHP47989 1333 aa4.72□□□□□ -1.65
USP48-215ENST00000534705 PPRC1Q5VV67 1664 aaKnown RBP4.71□□□□□ -1.66
USP48-215ENST00000534705 SAMD9Q5K651 1589 aa4.71□□□□□ -1.66
USP48-215ENST00000534705 ALG1L2C9J202 215 aa4.71□□□□□ -1.66
USP48-215ENST00000534705 PRAMEF4O60810 478 aa4.71□□□□□ -1.66
USP48-215ENST00000534705 CDK11BP21127 795 aaKnown RBP4.71□□□□□ -1.66
USP48-215ENST00000534705 CRHR1P34998 444 aa4.71□□□□□ -1.66
USP48-215ENST00000534705 SCAND1P57086 179 aa4.71□□□□□ -1.66
USP48-215ENST00000534705 KRT85P78386 507 aa4.71□□□□□ -1.66
USP48-215ENST00000534705 AMPD3Q01432 767 aa4.71□□□□□ -1.66
USP48-215ENST00000534705 ELAVL1Q15717 326 aaKnown RBP4.71□□□□□ -1.66
USP48-215ENST00000534705 MST1LQ2TV78 715 aa4.71□□□□□ -1.66
USP48-215ENST00000534705 INAVAQ3KP66 663 aa4.71□□□□□ -1.66
USP48-215ENST00000534705 NAIF1Q69YI7 327 aaPredicted RBP4.71□□□□□ -1.66
USP48-215ENST00000534705 CYB5RLQ6IPT4 315 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms