RNA–Protein interactions for RNA: ENST00000534591.1

VPS51-216, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5

Gene VPS51, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-216ENST00000534591 TMEM117Q9H0C3 514 aa18.5■□□□□ 0.55
VPS51-216ENST00000534591 ARHGAP20Q9P2F6 1191 aa18.5■□□□□ 0.55
VPS51-216ENST00000534591 ANKFY1Q9P2R3 1169 aa18.5■□□□□ 0.55
VPS51-216ENST00000534591 COQ4Q9Y3A0 265 aa18.5■□□□□ 0.55
VPS51-216ENST00000534591 MBLAC1A4D2B0 266 aaPredicted RBP18.49■□□□□ 0.55
VPS51-216ENST00000534591 INO80B-WBP1J3KQ70 363 aa18.49■□□□□ 0.55
VPS51-216ENST00000534591 ZEB2O60315 1214 aa18.49■□□□□ 0.55
VPS51-216ENST00000534591 MYL3P08590 195 aa18.49■□□□□ 0.55
VPS51-216ENST00000534591 GJA9P57773 515 aa18.49■□□□□ 0.55
VPS51-216ENST00000534591 NKX3-2P78367 333 aa18.49■□□□□ 0.55
VPS51-216ENST00000534591 MCL1Q07820 350 aa18.49■□□□□ 0.55
VPS51-216ENST00000534591 PRPF4BQ13523 1007 aaKnown RBP18.49■□□□□ 0.55
VPS51-216ENST00000534591 RAPGEF1Q13905 1077 aa18.49■□□□□ 0.55
VPS51-216ENST00000534591 ASIC2Q16515 512 aa18.49■□□□□ 0.55
VPS51-216ENST00000534591 NFRKBQ6P4R8 1299 aa18.49■□□□□ 0.55
VPS51-216ENST00000534591 ZNF410Q86VK4 478 aa18.49■□□□□ 0.55
VPS51-216ENST00000534591 KIAA0319LQ8IZA0 1049 aa18.49■□□□□ 0.55
VPS51-216ENST00000534591 LMBR1Q8WVP7 490 aa18.49■□□□□ 0.55
VPS51-216ENST00000534591 STK33Q9BYT3 514 aa18.49■□□□□ 0.55
VPS51-216ENST00000534591 INO80BQ9C086 356 aaPredicted RBP18.49■□□□□ 0.55
VPS51-216ENST00000534591 HAPLN2Q9GZV7 340 aa18.49■□□□□ 0.55
VPS51-216ENST00000534591 UPF3AQ9H1J1 476 aaKnown RBP18.49■□□□□ 0.55
VPS51-216ENST00000534591 IFT122Q9HBG6 1241 aa18.49■□□□□ 0.55
VPS51-216ENST00000534591 SETD4Q9NVD3 440 aa18.49■□□□□ 0.55
VPS51-216ENST00000534591 APEX2Q9UBZ4 518 aa18.49■□□□□ 0.55
VPS51-216ENST00000534591 BZW2Q9Y6E2 419 aaKnown RBP18.49■□□□□ 0.55
VPS51-216ENST00000534591 RANBP2P49792 3224 aaKnown RBP18.49■□□□□ 0.55
VPS51-216ENST00000534591 OGTO15294 1046 aa18.49■□□□□ 0.55
VPS51-216ENST00000534591 CAPN2P17655 700 aa18.49■□□□□ 0.55
VPS51-216ENST00000534591 PROZP22891 400 aa18.49■□□□□ 0.55
VPS51-216ENST00000534591 JAM2P57087 298 aa18.49■□□□□ 0.55
VPS51-216ENST00000534591 NLRP11P59045 1033 aaKnown RBP18.49■□□□□ 0.55
VPS51-216ENST00000534591 ATF7IP2Q5U623 682 aa18.49■□□□□ 0.55
VPS51-216ENST00000534591 PRPF38BQ5VTL8 546 aaKnown RBP18.49■□□□□ 0.55
VPS51-216ENST00000534591 IQCEQ6IPM2 695 aa18.49■□□□□ 0.55
VPS51-216ENST00000534591 MPZL3Q6UWV2 235 aa18.49■□□□□ 0.55
VPS51-216ENST00000534591 CRELD2Q6UXH1 353 aaPredicted RBP18.49■□□□□ 0.55
VPS51-216ENST00000534591 PRIMPOLQ96LW4 560 aa18.49■□□□□ 0.55
VPS51-216ENST00000534591 FNBP1Q96RU3 617 aa18.49■□□□□ 0.55
VPS51-216ENST00000534591 TCHPQ9BT92 498 aa18.49■□□□□ 0.55
VPS51-216ENST00000534591 SPC25Q9HBM1 224 aa18.49■□□□□ 0.55
VPS51-216ENST00000534591 DDX20Q9UHI6 824 aaKnown RBP18.49■□□□□ 0.55
VPS51-216ENST00000534591 TNFSF13BQ9Y275 285 aa18.49■□□□□ 0.55
VPS51-216ENST00000534591 A0A087WZ62 844 aa18.48■□□□□ 0.55
VPS51-216ENST00000534591 SMIM35A0A1B0GVV1 85 aa18.48■□□□□ 0.55
VPS51-216ENST00000534591 ABLIM1O14639 778 aa18.48■□□□□ 0.55
VPS51-216ENST00000534591 SEPT4O43236 478 aa18.48■□□□□ 0.55
VPS51-216ENST00000534591 EIF4A3P38919 411 aaKnown RBP18.48■□□□□ 0.55
VPS51-216ENST00000534591 ACOT2P49753 483 aa18.48■□□□□ 0.55
VPS51-216ENST00000534591 BEX3Q00994 111 aa18.48■□□□□ 0.55
VPS51-216ENST00000534591 HGSNATQ68CP4 663 aa18.48■□□□□ 0.55
VPS51-216ENST00000534591 ZNF662Q6ZS27 426 aa18.48■□□□□ 0.55
VPS51-216ENST00000534591 SRGAP1Q7Z6B7 1085 aa18.48■□□□□ 0.55
VPS51-216ENST00000534591 ACRBPQ8NEB7 543 aa18.48■□□□□ 0.55
VPS51-216ENST00000534591 FDXACB1Q9BRP7 624 aaPredicted RBP18.48■□□□□ 0.55
VPS51-216ENST00000534591 DEF6Q9H4E7 631 aa18.48■□□□□ 0.55
VPS51-216ENST00000534591 PTPRHQ9HD43 1115 aa18.48■□□□□ 0.55
VPS51-216ENST00000534591 RBAKQ9NYW8 714 aaPredicted RBP18.48■□□□□ 0.55
VPS51-216ENST00000534591 DNAJC12Q9UKB3 198 aa18.48■□□□□ 0.55
VPS51-216ENST00000534591 TTLL13PA6NNM8 815 aa18.47■□□□□ 0.55
VPS51-216ENST00000534591 LCA5LO95447 670 aa18.47■□□□□ 0.55
VPS51-216ENST00000534591 VTNP04004 478 aa18.47■□□□□ 0.55
VPS51-216ENST00000534591 DLATP10515 647 aaKnown RBP18.47■□□□□ 0.55
VPS51-216ENST00000534591 GNAT1P11488 350 aa18.47■□□□□ 0.55
VPS51-216ENST00000534591 ANXA13P27216 316 aa18.47■□□□□ 0.55
VPS51-216ENST00000534591 STAT1P42224 750 aa18.47■□□□□ 0.55
VPS51-216ENST00000534591 GPC3P51654 580 aa18.47■□□□□ 0.55
VPS51-216ENST00000534591 ETF1P62495 437 aaKnown RBP18.47■□□□□ 0.55
VPS51-216ENST00000534591 ADAM17P78536 824 aa18.47■□□□□ 0.55
VPS51-216ENST00000534591 PURAQ00577 322 aaKnown RBP18.47■□□□□ 0.55
VPS51-216ENST00000534591 KLHL30Q0D2K2 578 aa18.47■□□□□ 0.55
VPS51-216ENST00000534591 SPA17Q15506 151 aa18.47■□□□□ 0.55
VPS51-216ENST00000534591 SURF1Q15526 300 aa18.47■□□□□ 0.55
VPS51-216ENST00000534591 ZNF710Q8N1W2 664 aa18.47■□□□□ 0.55
VPS51-216ENST00000534591 FBXL13Q8NEE6 735 aa18.47■□□□□ 0.55
VPS51-216ENST00000534591 MINDY3Q9H8M7 445 aa18.47■□□□□ 0.55
VPS51-216ENST00000534591 PAXBP1Q9Y5B6 917 aa18.47■□□□□ 0.55
VPS51-216ENST00000534591 AKR1B10O60218 316 aa18.46■□□□□ 0.55
VPS51-216ENST00000534591 FAM189A1O60320 539 aa18.46■□□□□ 0.55
VPS51-216ENST00000534591 C6orf222P0C671 652 aaPredicted RBP18.46■□□□□ 0.55
VPS51-216ENST00000534591 CCDC172P0C7W6 258 aa18.46■□□□□ 0.55
VPS51-216ENST00000534591 RARBP10826 455 aa18.46■□□□□ 0.55
VPS51-216ENST00000534591 FERP16591 822 aa18.46■□□□□ 0.55
VPS51-216ENST00000534591 PRKCIP41743 596 aa18.46■□□□□ 0.55
VPS51-216ENST00000534591 KIF11P52732 1056 aa18.46■□□□□ 0.55
VPS51-216ENST00000534591 TMEM132AQ24JP5 1023 aa18.46■□□□□ 0.55
VPS51-216ENST00000534591 ASTE1Q2TB18 679 aaPredicted RBP18.46■□□□□ 0.55
VPS51-216ENST00000534591 TDRD12Q587J7 1177 aaKnown RBP18.46■□□□□ 0.55
VPS51-216ENST00000534591 SV2AQ7L0J3 742 aa18.46■□□□□ 0.55
VPS51-216ENST00000534591 IRF2BP2Q7Z5L9 587 aa18.46■□□□□ 0.55
VPS51-216ENST00000534591 BRSK2Q8IWQ3 736 aa18.46■□□□□ 0.55
VPS51-216ENST00000534591 ANKLE1Q8NAG6 615 aa18.46■□□□□ 0.55
VPS51-216ENST00000534591 KIF18AQ8NI77 898 aa18.46■□□□□ 0.55
VPS51-216ENST00000534591 NLRP7Q8WX94 980 aa18.46■□□□□ 0.55
VPS51-216ENST00000534591 POP1Q99575 1024 aaKnown RBP18.46■□□□□ 0.55
VPS51-216ENST00000534591 CGRRF1Q99675 332 aa18.46■□□□□ 0.55
VPS51-216ENST00000534591 REXO2Q9Y3B8 237 aaKnown RBP18.46■□□□□ 0.55
VPS51-216ENST00000534591 CNTNAP2Q9UHC6 1331 aa18.46■□□□□ 0.54
VPS51-216ENST00000534591 ZC3H11AO75152 810 aaKnown RBP eCLIP18.45■□□□□ 0.54
VPS51-216ENST00000534591 PLEKP08567 350 aaPredicted RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms