RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	TSPAN6	O43657	245 aa		5.75	□□□□□ -1.49
ECHDC1-223	ENST00000534442	ECE2	O60344	883 aa		5.75	□□□□□ -1.49
ECHDC1-223	ENST00000534442	MED26	O95402	600 aa		5.75	□□□□□ -1.49
ECHDC1-223	ENST00000534442	CORO7	P57737	925 aa		5.75	□□□□□ -1.49
ECHDC1-223	ENST00000534442	ERVK-21	P61565	698 aa		5.75	□□□□□ -1.49
ECHDC1-223	ENST00000534442	OCRL	Q01968	901 aa		5.75	□□□□□ -1.49
ECHDC1-223	ENST00000534442	MVK	Q03426	396 aa		5.75	□□□□□ -1.49
ECHDC1-223	ENST00000534442	FPGS	Q05932	587 aa		5.75	□□□□□ -1.49
ECHDC1-223	ENST00000534442	SRSF1	Q07955	248 aa	Known RBP eCLIP	5.75	□□□□□ -1.49
ECHDC1-223	ENST00000534442	SPIRE1	Q08AE8	756 aa		5.75	□□□□□ -1.49
ECHDC1-223	ENST00000534442	DUSP4	Q13115	394 aa		5.75	□□□□□ -1.49
ECHDC1-223	ENST00000534442	RRS1	Q15050	365 aa	Known RBP	5.75	□□□□□ -1.49
ECHDC1-223	ENST00000534442	INAVA	Q3KP66	663 aa		5.75	□□□□□ -1.49
ECHDC1-223	ENST00000534442	PRSS36	Q5K4E3	855 aa		5.75	□□□□□ -1.49
ECHDC1-223	ENST00000534442	IQSEC1	Q6DN90	963 aa		5.75	□□□□□ -1.49
ECHDC1-223	ENST00000534442	NFXL1	Q6ZNB6	911 aa		5.75	□□□□□ -1.49
ECHDC1-223	ENST00000534442	CEP128	Q6ZU80	1094 aa		5.75	□□□□□ -1.49
ECHDC1-223	ENST00000534442	RIOX2	Q8IUF8	465 aa		5.75	□□□□□ -1.49
ECHDC1-223	ENST00000534442	STK11IP	Q8N1F8	1099 aa		5.75	□□□□□ -1.49
ECHDC1-223	ENST00000534442	LZTR1	Q8N653	840 aa		5.75	□□□□□ -1.49
ECHDC1-223	ENST00000534442	EFHB	Q8N7U6	833 aa		5.75	□□□□□ -1.49
ECHDC1-223	ENST00000534442	CLRN3	Q8NCR9	226 aa		5.75	□□□□□ -1.49
ECHDC1-223	ENST00000534442	PIP4K2C	Q8TBX8	421 aa		5.75	□□□□□ -1.49
ECHDC1-223	ENST00000534442	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	5.75	□□□□□ -1.49
ECHDC1-223	ENST00000534442	RBM17	Q96I25	401 aa	Known RBP	5.75	□□□□□ -1.49
ECHDC1-223	ENST00000534442	ALPK1	Q96QP1	1244 aa		5.75	□□□□□ -1.49
ECHDC1-223	ENST00000534442	CRAMP1	Q96RY5	1269 aa		5.75	□□□□□ -1.49
ECHDC1-223	ENST00000534442	PLCD4	Q9BRC7	762 aa		5.75	□□□□□ -1.49
ECHDC1-223	ENST00000534442	BOC	Q9BWV1	1114 aa		5.75	□□□□□ -1.49
ECHDC1-223	ENST00000534442	EPB41L1	Q9H4G0	881 aa		5.75	□□□□□ -1.49
ECHDC1-223	ENST00000534442	SP110	Q9HB58	689 aa		5.75	□□□□□ -1.49
ECHDC1-223	ENST00000534442	IMPACT	Q9P2X3	320 aa		5.75	□□□□□ -1.49
ECHDC1-223	ENST00000534442	SLC5A6	Q9Y289	635 aa		5.75	□□□□□ -1.49
ECHDC1-223	ENST00000534442	GBF1	Q92538	1859 aa		5.75	□□□□□ -1.49
ECHDC1-223	ENST00000534442	DMXL2	Q8TDJ6	3036 aa		5.74	□□□□□ -1.49
ECHDC1-223	ENST00000534442	ZNF536	O15090	1300 aa		5.74	□□□□□ -1.49
ECHDC1-223	ENST00000534442	DDX60	Q8IY21	1712 aa	Known RBP	5.74	□□□□□ -1.49
ECHDC1-223	ENST00000534442	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	5.74	□□□□□ -1.49
ECHDC1-223	ENST00000534442	EIF4E1B	A6NMX2	242 aa	Known RBP	5.74	□□□□□ -1.49
ECHDC1-223	ENST00000534442	TNPO2	O14787	897 aa	Known RBP	5.74	□□□□□ -1.49
ECHDC1-223	ENST00000534442	ULK1	O75385	1050 aa		5.74	□□□□□ -1.49
ECHDC1-223	ENST00000534442	DGKI	O75912	1065 aa		5.74	□□□□□ -1.49
ECHDC1-223	ENST00000534442	PRNP	P04156	253 aa		5.74	□□□□□ -1.49
ECHDC1-223	ENST00000534442	SDHB	P21912	280 aa		5.74	□□□□□ -1.49
ECHDC1-223	ENST00000534442	SEC23A	Q15436	765 aa		5.74	□□□□□ -1.49
ECHDC1-223	ENST00000534442	HSP90AB2P	Q58FF8	381 aa		5.74	□□□□□ -1.49
ECHDC1-223	ENST00000534442	EPHA10	Q5JZY3	1008 aa		5.74	□□□□□ -1.49
ECHDC1-223	ENST00000534442	MROH9	Q5TGP6	573 aa		5.74	□□□□□ -1.49
ECHDC1-223	ENST00000534442	C11orf74	Q86VG3	221 aa		5.74	□□□□□ -1.49
ECHDC1-223	ENST00000534442	NOSTRIN	Q8IVI9	506 aa		5.74	□□□□□ -1.49
ECHDC1-223	ENST00000534442	SLC5A5	Q92911	643 aa		5.74	□□□□□ -1.49
ECHDC1-223	ENST00000534442	HOOK2	Q96ED9	719 aa		5.74	□□□□□ -1.49
ECHDC1-223	ENST00000534442	MENT	Q9BUN1	341 aa		5.74	□□□□□ -1.49
ECHDC1-223	ENST00000534442	PRDM7	Q9NQW5	492 aa		5.74	□□□□□ -1.49
ECHDC1-223	ENST00000534442	TMEM59L	Q9UK28	342 aa		5.74	□□□□□ -1.49
ECHDC1-223	ENST00000534442	ACSL6	Q9UKU0	697 aa		5.74	□□□□□ -1.49
ECHDC1-223	ENST00000534442	SCN9A	Q15858	1988 aa		5.74	□□□□□ -1.49
ECHDC1-223	ENST00000534442	OTOGL	Q3ZCN5	2332 aa		5.74	□□□□□ -1.49
ECHDC1-223	ENST00000534442	SRRM3	A6NNA2	597 aa	Predicted RBP	5.73	□□□□□ -1.49
ECHDC1-223	ENST00000534442	WNT10B	O00744	389 aa		5.73	□□□□□ -1.49
ECHDC1-223	ENST00000534442	NRDC	O43847	1150 aa		5.73	□□□□□ -1.49
ECHDC1-223	ENST00000534442	FBXO21	O94952	628 aa		5.73	□□□□□ -1.49
ECHDC1-223	ENST00000534442	LMNA	P02545	664 aa	Known RBP	5.73	□□□□□ -1.49
ECHDC1-223	ENST00000534442	NTRK1	P04629	796 aa		5.73	□□□□□ -1.49
ECHDC1-223	ENST00000534442	HSP90AB1	P08238	724 aa	Known RBP	5.73	□□□□□ -1.49
ECHDC1-223	ENST00000534442	FURIN	P09958	794 aa		5.73	□□□□□ -1.49
ECHDC1-223	ENST00000534442	C1QTNF9	P0C862	333 aa		5.73	□□□□□ -1.49
ECHDC1-223	ENST00000534442	CETP	P11597	493 aa		5.73	□□□□□ -1.49
ECHDC1-223	ENST00000534442	SLC9A1	P19634	815 aa		5.73	□□□□□ -1.49
ECHDC1-223	ENST00000534442	TACR1	P25103	407 aa		5.73	□□□□□ -1.49
ECHDC1-223	ENST00000534442	GRIK1	P39086	918 aa		5.73	□□□□□ -1.49
ECHDC1-223	ENST00000534442	CCR10	P46092	362 aa		5.73	□□□□□ -1.49
ECHDC1-223	ENST00000534442	IRF9	Q00978	393 aa		5.73	□□□□□ -1.49
ECHDC1-223	ENST00000534442	SMAD2	Q15796	467 aa	Known RBP	5.73	□□□□□ -1.49
ECHDC1-223	ENST00000534442	BROX	Q5VW32	411 aa		5.73	□□□□□ -1.49
ECHDC1-223	ENST00000534442	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	5.73	□□□□□ -1.49
ECHDC1-223	ENST00000534442	APOBEC3F	Q8IUX4	373 aa	Known RBP	5.73	□□□□□ -1.49
ECHDC1-223	ENST00000534442	ADHFE1	Q8IWW8	467 aa		5.73	□□□□□ -1.49
ECHDC1-223	ENST00000534442	DCLK2	Q8N568	766 aa		5.73	□□□□□ -1.49
ECHDC1-223	ENST00000534442	KIAA1958	Q8N8K9	716 aa		5.73	□□□□□ -1.49
ECHDC1-223	ENST00000534442	ANKS4B	Q8N8V4	417 aa		5.73	□□□□□ -1.49
ECHDC1-223	ENST00000534442	UHMK1	Q8TAS1	419 aa	Known RBP	5.73	□□□□□ -1.49
ECHDC1-223	ENST00000534442	DLG3	Q92796	817 aa		5.73	□□□□□ -1.49
ECHDC1-223	ENST00000534442	CHMP4C	Q96CF2	233 aa		5.73	□□□□□ -1.49
ECHDC1-223	ENST00000534442	ZNF496	Q96IT1	587 aa	Predicted RBP	5.73	□□□□□ -1.49
ECHDC1-223	ENST00000534442	ELF4	Q99607	663 aa	Predicted RBP	5.73	□□□□□ -1.49
ECHDC1-223	ENST00000534442	CD244	Q9BZW8	370 aa		5.73	□□□□□ -1.49
ECHDC1-223	ENST00000534442	SLC6A20	Q9NP91	592 aa		5.73	□□□□□ -1.49
ECHDC1-223	ENST00000534442	COA3	Q9Y2R0	106 aa	Predicted RBP	5.73	□□□□□ -1.49
ECHDC1-223	ENST00000534442	SPO11	Q9Y5K1	396 aa		5.73	□□□□□ -1.49
ECHDC1-223	ENST00000534442	COL12A1	Q99715	3063 aa		5.73	□□□□□ -1.49
ECHDC1-223	ENST00000534442	CENPJ	Q9HC77	1338 aa	Predicted RBP	5.73	□□□□□ -1.49
ECHDC1-223	ENST00000534442	DNHD1	Q96M86	4753 aa		5.72	□□□□□ -1.49
ECHDC1-223	ENST00000534442	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	5.72	□□□□□ -1.49
ECHDC1-223	ENST00000534442	EPOP	A6NHQ4	379 aa		5.72	□□□□□ -1.49
ECHDC1-223	ENST00000534442	SASH1	O94885	1247 aa		5.72	□□□□□ -1.49
ECHDC1-223	ENST00000534442	SCGB1D2	O95969	90 aa		5.72	□□□□□ -1.49
ECHDC1-223	ENST00000534442	PRKCA	P17252	672 aa		5.72	□□□□□ -1.49
ECHDC1-223	ENST00000534442	HK2	P52789	917 aa		5.72	□□□□□ -1.49
ECHDC1-223	ENST00000534442	SESN3	P58005	492 aa		5.72	□□□□□ -1.49

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