RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 RAB24Q969Q5 203 aa8.35□□□□□ -1.07
CASP4-213ENST00000534356 GTPBP4Q9BZE4 634 aaKnown RBP8.35□□□□□ -1.07
CASP4-213ENST00000534356 EPC1Q9H2F5 836 aa8.35□□□□□ -1.07
CASP4-213ENST00000534356 LANCL2Q9NS86 450 aa8.35□□□□□ -1.07
CASP4-213ENST00000534356 URB2Q14146 1524 aaKnown RBP8.34□□□□□ -1.07
CASP4-213ENST00000534356 CEP164Q9UPV0 1460 aa8.34□□□□□ -1.07
CASP4-213ENST00000534356 AMY1AP04745 511 aa8.34□□□□□ -1.07
CASP4-213ENST00000534356 HMGB1P09429 215 aaKnown RBP8.34□□□□□ -1.07
CASP4-213ENST00000534356 CYP2C19P33261 490 aa8.34□□□□□ -1.07
CASP4-213ENST00000534356 GUCY1A2P33402 732 aa8.34□□□□□ -1.07
CASP4-213ENST00000534356 FAM102BQ5T8I3 360 aa8.34□□□□□ -1.07
CASP4-213ENST00000534356 USP45Q70EL2 814 aa8.34□□□□□ -1.07
CASP4-213ENST00000534356 PDZD4Q76G19 769 aaPredicted RBP8.34□□□□□ -1.07
CASP4-213ENST00000534356 POLNQ7Z5Q5 900 aa8.34□□□□□ -1.07
CASP4-213ENST00000534356 D2HGDHQ8N465 521 aa8.34□□□□□ -1.07
CASP4-213ENST00000534356 PRR18Q8N4B5 295 aa8.34□□□□□ -1.07
CASP4-213ENST00000534356 ZGPATQ8N5A5 531 aaKnown RBP8.34□□□□□ -1.07
CASP4-213ENST00000534356 RELTQ969Z4 430 aa8.34□□□□□ -1.07
CASP4-213ENST00000534356 BORCS6Q96GS4 357 aa8.34□□□□□ -1.07
CASP4-213ENST00000534356 WWC2-AS2Q96NR7 200 aa8.34□□□□□ -1.07
CASP4-213ENST00000534356 SENP6Q9GZR1 1112 aaPredicted RBP8.34□□□□□ -1.07
CASP4-213ENST00000534356 MANSC1Q9H8J5 431 aa8.34□□□□□ -1.07
CASP4-213ENST00000534356 PCDHB1Q9Y5F3 818 aa8.34□□□□□ -1.07
CASP4-213ENST00000534356 FOXD2O60548 495 aaPredicted RBP8.33□□□□□ -1.08
CASP4-213ENST00000534356 ZNF623O75123 536 aa8.33□□□□□ -1.08
CASP4-213ENST00000534356 TARDBPQ13148 414 aaKnown RBP eCLIP8.33□□□□□ -1.08
CASP4-213ENST00000534356 LILRA6Q6PI73 481 aa8.33□□□□□ -1.08
CASP4-213ENST00000534356 Q6ZSN1 163 aa8.33□□□□□ -1.08
CASP4-213ENST00000534356 ZNF572Q7Z3I7 529 aaPredicted RBP8.33□□□□□ -1.08
CASP4-213ENST00000534356 LOXL4Q96JB6 756 aa8.33□□□□□ -1.08
CASP4-213ENST00000534356 LRGUKQ96M69 825 aa8.33□□□□□ -1.08
CASP4-213ENST00000534356 CD248Q9HCU0 757 aa8.33□□□□□ -1.08
CASP4-213ENST00000534356 AJAP1Q9UKB5 411 aaPredicted RBP8.33□□□□□ -1.08
CASP4-213ENST00000534356 ATRNL1Q5VV63 1379 aa8.33□□□□□ -1.08
CASP4-213ENST00000534356 K7ESM1 405 aa8.32□□□□□ -1.08
CASP4-213ENST00000534356 ALOX15P16050 662 aaPredicted RBP8.32□□□□□ -1.08
CASP4-213ENST00000534356 FPR1P21462 350 aa8.32□□□□□ -1.08
CASP4-213ENST00000534356 COMTP21964 271 aa8.32□□□□□ -1.08
CASP4-213ENST00000534356 FAM47AQ5JRC9 791 aa8.32□□□□□ -1.08
CASP4-213ENST00000534356 IFIT1BQ5T764 474 aaKnown RBP8.32□□□□□ -1.08
CASP4-213ENST00000534356 ANKS6Q68DC2 871 aa8.32□□□□□ -1.08
CASP4-213ENST00000534356 CYB5RLQ6IPT4 315 aa8.32□□□□□ -1.08
CASP4-213ENST00000534356 XYLT1Q86Y38 959 aa8.32□□□□□ -1.08
CASP4-213ENST00000534356 ELOA2Q8IYF1 753 aaPredicted RBP8.32□□□□□ -1.08
CASP4-213ENST00000534356 CYFIP2Q96F07 1278 aa8.32□□□□□ -1.08
CASP4-213ENST00000534356 SAMD11Q96NU1 681 aa8.32□□□□□ -1.08
CASP4-213ENST00000534356 MPHOSPH9Q99550 1183 aa8.32□□□□□ -1.08
CASP4-213ENST00000534356 KRTAP4-9Q9BYQ8 210 aa8.32□□□□□ -1.08
CASP4-213ENST00000534356 KCNH6Q9H252 994 aa8.32□□□□□ -1.08
CASP4-213ENST00000534356 SLC12A5Q9H2X9 1139 aa8.32□□□□□ -1.08
CASP4-213ENST00000534356 ANLNQ9NQW6 1124 aa8.32□□□□□ -1.08
CASP4-213ENST00000534356 TDP1Q9NUW8 608 aa8.32□□□□□ -1.08
CASP4-213ENST00000534356 CHPF2Q9P2E5 772 aa8.32□□□□□ -1.08
CASP4-213ENST00000534356 ST6GALNAC2Q9UJ37 374 aa8.32□□□□□ -1.08
CASP4-213ENST00000534356 ZNF608Q9ULD9 1512 aaPredicted RBP8.32□□□□□ -1.08
CASP4-213ENST00000534356 MYBBP1AQ9BQG0 1328 aaKnown RBP8.31□□□□□ -1.08
CASP4-213ENST00000534356 LPOP22079 712 aaPredicted RBP8.31□□□□□ -1.08
CASP4-213ENST00000534356 PCSK1P29120 753 aa8.31□□□□□ -1.08
CASP4-213ENST00000534356 FLT3LGP49771 235 aa8.31□□□□□ -1.08
CASP4-213ENST00000534356 CDC42EP1Q00587 391 aa8.31□□□□□ -1.08
CASP4-213ENST00000534356 DSC2Q02487 901 aa8.31□□□□□ -1.08
CASP4-213ENST00000534356 SP140Q13342 867 aa8.31□□□□□ -1.08
CASP4-213ENST00000534356 ZNF267Q14586 743 aaPredicted RBP8.31□□□□□ -1.08
CASP4-213ENST00000534356 ELAVL1Q15717 326 aaKnown RBP8.31□□□□□ -1.08
CASP4-213ENST00000534356 SPTY2D1Q68D10 685 aaPredicted RBP8.31□□□□□ -1.08
CASP4-213ENST00000534356 MFSD5Q6N075 450 aa8.31□□□□□ -1.08
CASP4-213ENST00000534356 EPM2AIP1Q7L775 607 aaPredicted RBP8.31□□□□□ -1.08
CASP4-213ENST00000534356 TCEAL8Q8IYN2 117 aa8.31□□□□□ -1.08
CASP4-213ENST00000534356 HPS3Q969F9 1004 aa8.31□□□□□ -1.08
CASP4-213ENST00000534356 AIFM3Q96NN9 605 aa8.31□□□□□ -1.08
CASP4-213ENST00000534356 LSM14BQ9BX40 385 aaKnown RBP8.31□□□□□ -1.08
CASP4-213ENST00000534356 TMEM140Q9NV12 185 aa8.31□□□□□ -1.08
CASP4-213ENST00000534356 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.31□□□□□ -1.08
CASP4-213ENST00000534356 JAG2Q9Y219 1238 aa8.31□□□□□ -1.08
CASP4-213ENST00000534356 ACTL7AQ9Y615 435 aa8.31□□□□□ -1.08
CASP4-213ENST00000534356 CFAP20Q9Y6A4 193 aaKnown RBP8.31□□□□□ -1.08
CASP4-213ENST00000534356 ARID1BQ8NFD5 2236 aaPredicted RBP8.31□□□□□ -1.08
CASP4-213ENST00000534356 AP1G1O43747 822 aa8.3□□□□□ -1.08
CASP4-213ENST00000534356 SGTAO43765 313 aa8.3□□□□□ -1.08
CASP4-213ENST00000534356 GPR32O75388 356 aa8.3□□□□□ -1.08
CASP4-213ENST00000534356 IL2RBP14784 551 aa8.3□□□□□ -1.08
CASP4-213ENST00000534356 SYN1P17600 705 aa8.3□□□□□ -1.08
CASP4-213ENST00000534356 ACO1P21399 889 aaKnown RBP8.3□□□□□ -1.08
CASP4-213ENST00000534356 ATP8B2P98198 1209 aa8.3□□□□□ -1.08
CASP4-213ENST00000534356 MTM1Q13496 603 aa8.3□□□□□ -1.08
CASP4-213ENST00000534356 GTF2H3Q13889 308 aa8.3□□□□□ -1.08
CASP4-213ENST00000534356 ATAT1Q5SQI0 421 aa8.3□□□□□ -1.08
CASP4-213ENST00000534356 ERICH6BQ5W0A0 696 aa8.3□□□□□ -1.08
CASP4-213ENST00000534356 AFMIDQ63HM1 303 aa8.3□□□□□ -1.08
CASP4-213ENST00000534356 NXNQ6DKJ4 435 aa8.3□□□□□ -1.08
CASP4-213ENST00000534356 CXorf57Q6NSI4 855 aaKnown RBP8.3□□□□□ -1.08
CASP4-213ENST00000534356 MYO1HQ8N1T3 1032 aa8.3□□□□□ -1.08
CASP4-213ENST00000534356 ZNF808Q8N4W9 903 aaPredicted RBP8.3□□□□□ -1.08
CASP4-213ENST00000534356 SLC35B2Q8TB61 432 aa8.3□□□□□ -1.08
CASP4-213ENST00000534356 MVB12AQ96EY5 273 aa8.3□□□□□ -1.08
CASP4-213ENST00000534356 DMRTA2Q96SC8 542 aa8.3□□□□□ -1.08
CASP4-213ENST00000534356 HECAQ9UBI9 543 aaPredicted RBP8.3□□□□□ -1.08
CASP4-213ENST00000534356 DTNBO60941 627 aa8.29□□□□□ -1.08
CASP4-213ENST00000534356 OFD1O75665 1012 aa8.29□□□□□ -1.08
CASP4-213ENST00000534356 GNAT2P19087 354 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms