RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 ATRNL1Q5VV63 1379 aa5.34□□□□□ -1.55
ATPAF1-211ENST00000534216 SHTN1A0MZ66 631 aa5.34□□□□□ -1.55
ATPAF1-211ENST00000534216 KLHL33A6NCF5 533 aa5.34□□□□□ -1.55
ATPAF1-211ENST00000534216 TBKBP1A7MCY6 615 aa5.34□□□□□ -1.55
ATPAF1-211ENST00000534216 FZD7O75084 574 aa5.34□□□□□ -1.55
ATPAF1-211ENST00000534216 ENDOD1O94919 500 aa5.34□□□□□ -1.55
ATPAF1-211ENST00000534216 ALOX15P16050 662 aaPredicted RBP5.34□□□□□ -1.55
ATPAF1-211ENST00000534216 PER3P56645 1201 aa5.34□□□□□ -1.55
ATPAF1-211ENST00000534216 KRT85P78386 507 aa5.34□□□□□ -1.55
ATPAF1-211ENST00000534216 KRTAP1-1Q07627 177 aa5.34□□□□□ -1.55
ATPAF1-211ENST00000534216 ACAP2Q15057 778 aa5.34□□□□□ -1.55
ATPAF1-211ENST00000534216 BMT2Q1RMZ1 405 aa5.34□□□□□ -1.55
ATPAF1-211ENST00000534216 IGFL4Q6B9Z1 124 aa5.34□□□□□ -1.55
ATPAF1-211ENST00000534216 DRICH1Q6PGQ1 229 aaPredicted RBP5.34□□□□□ -1.55
ATPAF1-211ENST00000534216 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.34□□□□□ -1.55
ATPAF1-211ENST00000534216 FBXO18Q8NFZ0 1043 aa5.34□□□□□ -1.55
ATPAF1-211ENST00000534216 OR2I1PQ8NGU4 316 aa5.34□□□□□ -1.55
ATPAF1-211ENST00000534216 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.34□□□□□ -1.55
ATPAF1-211ENST00000534216 SLC35B2Q8TB61 432 aa5.34□□□□□ -1.55
ATPAF1-211ENST00000534216 NDC1Q9BTX1 674 aa5.34□□□□□ -1.55
ATPAF1-211ENST00000534216 ASPSCR1Q9BZE9 553 aa5.34□□□□□ -1.55
ATPAF1-211ENST00000534216 SPON1Q9HCB6 807 aa5.34□□□□□ -1.55
ATPAF1-211ENST00000534216 LANCL2Q9NS86 450 aa5.34□□□□□ -1.55
ATPAF1-211ENST00000534216 TUBD1Q9UJT1 453 aa5.34□□□□□ -1.55
ATPAF1-211ENST00000534216 SIK3Q9Y2K2 1263 aa5.34□□□□□ -1.55
ATPAF1-211ENST00000534216 TNKSO95271 1327 aa5.33□□□□□ -1.56
ATPAF1-211ENST00000534216 FAM171A2A8MVW0 826 aa5.33□□□□□ -1.56
ATPAF1-211ENST00000534216 CXorf49A8MYA2 514 aaPredicted RBP5.33□□□□□ -1.56
ATPAF1-211ENST00000534216 PJA2O43164 708 aa5.33□□□□□ -1.56
ATPAF1-211ENST00000534216 NARSO43776 548 aaKnown RBP5.33□□□□□ -1.56
ATPAF1-211ENST00000534216 FAM20BO75063 409 aa5.33□□□□□ -1.56
ATPAF1-211ENST00000534216 NDUFS2O75306 463 aa5.33□□□□□ -1.56
ATPAF1-211ENST00000534216 PEX11BO96011 259 aa5.33□□□□□ -1.56
ATPAF1-211ENST00000534216 C5AR1P21730 350 aa5.33□□□□□ -1.56
ATPAF1-211ENST00000534216 IBSPP21815 317 aaPredicted RBP5.33□□□□□ -1.56
ATPAF1-211ENST00000534216 GUCY1A2P33402 732 aa5.33□□□□□ -1.56
ATPAF1-211ENST00000534216 WASP42768 502 aa5.33□□□□□ -1.56
ATPAF1-211ENST00000534216 SLC6A9P48067 706 aa5.33□□□□□ -1.56
ATPAF1-211ENST00000534216 PTTG1IPP53801 180 aa5.33□□□□□ -1.56
ATPAF1-211ENST00000534216 SP140Q13342 867 aa5.33□□□□□ -1.56
ATPAF1-211ENST00000534216 PCBP2Q15366 365 aaKnown RBP eCLIP5.33□□□□□ -1.56
ATPAF1-211ENST00000534216 FNDC7Q5VTL7 733 aa5.33□□□□□ -1.56
ATPAF1-211ENST00000534216 EFCAB12Q6NXP0 572 aa5.33□□□□□ -1.56
ATPAF1-211ENST00000534216 TFAP2CQ92754 450 aa5.33□□□□□ -1.56
ATPAF1-211ENST00000534216 TMPRSS5Q9H3S3 457 aa5.33□□□□□ -1.56
ATPAF1-211ENST00000534216 LDAHQ9H6V9 325 aa5.33□□□□□ -1.56
ATPAF1-211ENST00000534216 SORCS3Q9UPU3 1222 aa5.33□□□□□ -1.56
ATPAF1-211ENST00000534216 NOP58Q9Y2X3 529 aaKnown RBP5.33□□□□□ -1.56
ATPAF1-211ENST00000534216 TRIM24O15164 1050 aa5.32□□□□□ -1.56
ATPAF1-211ENST00000534216 XPOTO43592 962 aaKnown RBP5.32□□□□□ -1.56
ATPAF1-211ENST00000534216 ZNF202O95125 648 aa5.32□□□□□ -1.56
ATPAF1-211ENST00000534216 FSHBP01225 129 aa5.32□□□□□ -1.56
ATPAF1-211ENST00000534216 IL2RBP14784 551 aa5.32□□□□□ -1.56
ATPAF1-211ENST00000534216 APOBEC3AP31941 199 aaPredicted RBP5.32□□□□□ -1.56
ATPAF1-211ENST00000534216 ACVRL1P37023 503 aa5.32□□□□□ -1.56
ATPAF1-211ENST00000534216 CLRN1P58418 232 aa5.32□□□□□ -1.56
ATPAF1-211ENST00000534216 PTPN21Q16825 1174 aa5.32□□□□□ -1.56
ATPAF1-211ENST00000534216 AFMIDQ63HM1 303 aa5.32□□□□□ -1.56
ATPAF1-211ENST00000534216 SYT12Q8IV01 421 aa5.32□□□□□ -1.56
ATPAF1-211ENST00000534216 RNF169Q8NCN4 708 aa5.32□□□□□ -1.56
ATPAF1-211ENST00000534216 OR10H5Q8NGA6 315 aa5.32□□□□□ -1.56
ATPAF1-211ENST00000534216 CPT1CQ8TCG5 803 aa5.32□□□□□ -1.56
ATPAF1-211ENST00000534216 NRG4Q8WWG1 115 aa5.32□□□□□ -1.56
ATPAF1-211ENST00000534216 STON2Q8WXE9 905 aa5.32□□□□□ -1.56
ATPAF1-211ENST00000534216 DPF2Q92785 391 aa5.32□□□□□ -1.56
ATPAF1-211ENST00000534216 CYFIP2Q96F07 1278 aa5.32□□□□□ -1.56
ATPAF1-211ENST00000534216 SENP6Q9GZR1 1112 aaPredicted RBP5.32□□□□□ -1.56
ATPAF1-211ENST00000534216 HOMER2Q9NSB8 354 aa5.32□□□□□ -1.56
ATPAF1-211ENST00000534216 EIF2B4Q9UI10 523 aaKnown RBP5.32□□□□□ -1.56
ATPAF1-211ENST00000534216 AJAP1Q9UKB5 411 aaPredicted RBP5.32□□□□□ -1.56
ATPAF1-211ENST00000534216 INTUQ9ULD6 942 aa5.32□□□□□ -1.56
ATPAF1-211ENST00000534216 MRFAP1Q9Y605 127 aa5.32□□□□□ -1.56
ATPAF1-211ENST00000534216 HS3ST3A1Q9Y663 406 aa5.32□□□□□ -1.56
ATPAF1-211ENST00000534216 PNPLA7Q6ZV29 1317 aa5.31□□□□□ -1.56
ATPAF1-211ENST00000534216 LOC105371045A0A1W2PR82 267 aa5.31□□□□□ -1.56
ATPAF1-211ENST00000534216 LEFTY2O00292 366 aa5.31□□□□□ -1.56
ATPAF1-211ENST00000534216 RECQL4O94761 1208 aa5.31□□□□□ -1.56
ATPAF1-211ENST00000534216 SCAF4O95104 1147 aaKnown RBP5.31□□□□□ -1.56
ATPAF1-211ENST00000534216 SNRPA1P09661 255 aaKnown RBP5.31□□□□□ -1.56
ATPAF1-211ENST00000534216 MGAT1P26572 445 aa5.31□□□□□ -1.56
ATPAF1-211ENST00000534216 GDF5P43026 501 aa5.31□□□□□ -1.56
ATPAF1-211ENST00000534216 BRDTQ58F21 947 aaPredicted RBP5.31□□□□□ -1.56
ATPAF1-211ENST00000534216 RRP12Q5JTH9 1297 aaKnown RBP5.31□□□□□ -1.56
ATPAF1-211ENST00000534216 RPUSD2Q8IZ73 545 aaKnown RBP5.31□□□□□ -1.56
ATPAF1-211ENST00000534216 ZNF276Q8N554 614 aa5.31□□□□□ -1.56
ATPAF1-211ENST00000534216 SLC16A11Q8NCK7 471 aa5.31□□□□□ -1.56
ATPAF1-211ENST00000534216 ZFP28Q8NHY6 868 aa5.31□□□□□ -1.56
ATPAF1-211ENST00000534216 ZNF483Q8TF39 744 aaPredicted RBP5.31□□□□□ -1.56
ATPAF1-211ENST00000534216 CASKIN2Q8WXE0 1202 aa5.31□□□□□ -1.56
ATPAF1-211ENST00000534216 TEKT5Q96M29 485 aa5.31□□□□□ -1.56
ATPAF1-211ENST00000534216 C7orf25Q9BPX7 421 aa5.31□□□□□ -1.56
ATPAF1-211ENST00000534216 SLC13A1Q9BZW2 595 aa5.31□□□□□ -1.56
ATPAF1-211ENST00000534216 SCAND2PQ9GZW5 306 aaPredicted RBP5.31□□□□□ -1.56
ATPAF1-211ENST00000534216 SLC2A4RGQ9NR83 387 aa5.31□□□□□ -1.56
ATPAF1-211ENST00000534216 MOCS1Q9NZB8 636 aa5.31□□□□□ -1.56
ATPAF1-211ENST00000534216 GPRC5BQ9NZH0 403 aa5.31□□□□□ -1.56
ATPAF1-211ENST00000534216 POGKQ9P215 609 aa5.31□□□□□ -1.56
ATPAF1-211ENST00000534216 SAP30BPQ9UHR5 308 aaKnown RBP5.31□□□□□ -1.56
ATPAF1-211ENST00000534216 AHRRA9YTQ3 701 aa5.3□□□□□ -1.56
ATPAF1-211ENST00000534216 AKAP8O43823 692 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms