RNA–Protein interactions for RNA: ENST00000533827.5

VPS51-213, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 1,078 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-213ENST00000533827 C2orf16Q68DN1 1984 aa19.21■□□□□ 0.67
VPS51-213ENST00000533827 SPDYE4A6NLX3 237 aa19.21■□□□□ 0.67
VPS51-213ENST00000533827 PP2D1A8MPX8 630 aa19.21■□□□□ 0.67
VPS51-213ENST00000533827 E9PMD0 336 aa19.21■□□□□ 0.67
VPS51-213ENST00000533827 RECQL4O94761 1208 aa19.21■□□□□ 0.67
VPS51-213ENST00000533827 GLUD1P00367 558 aa19.21■□□□□ 0.67
VPS51-213ENST00000533827 C1RP00736 705 aa19.21■□□□□ 0.67
VPS51-213ENST00000533827 NHLH1Q02575 133 aa19.21■□□□□ 0.67
VPS51-213ENST00000533827 MTMR3Q13615 1198 aa19.21■□□□□ 0.67
VPS51-213ENST00000533827 HSP90AA2PQ14568 343 aaPredicted RBP19.21■□□□□ 0.67
VPS51-213ENST00000533827 NAB2Q15742 525 aa19.21■□□□□ 0.67
VPS51-213ENST00000533827 TMEM132AQ24JP5 1023 aa19.21■□□□□ 0.67
VPS51-213ENST00000533827 KMT2EQ8IZD2 1858 aa19.21■□□□□ 0.67
VPS51-213ENST00000533827 TMX3Q96JJ7 454 aa19.21■□□□□ 0.67
VPS51-213ENST00000533827 B3GALT6Q96L58 329 aa19.21■□□□□ 0.67
VPS51-213ENST00000533827 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.21■□□□□ 0.67
VPS51-213ENST00000533827 CACNG4Q9UBN1 327 aa19.21■□□□□ 0.67
VPS51-213ENST00000533827 DNM3Q9UQ16 869 aa19.21■□□□□ 0.67
VPS51-213ENST00000533827 TADA2AO75478 443 aa19.2■□□□□ 0.66
VPS51-213ENST00000533827 CD2BP2O95400 341 aaKnown RBP19.2■□□□□ 0.66
VPS51-213ENST00000533827 PAPLNO95428 1278 aa19.2■□□□□ 0.66
VPS51-213ENST00000533827 BRD1O95696 1058 aa19.2■□□□□ 0.66
VPS51-213ENST00000533827 THP07101 528 aa19.2■□□□□ 0.66
VPS51-213ENST00000533827 CDC25AP30304 524 aa19.2■□□□□ 0.66
VPS51-213ENST00000533827 RILPL1Q5EBL4 403 aa19.2■□□□□ 0.66
VPS51-213ENST00000533827 IER5LQ5T953 404 aa19.2■□□□□ 0.66
VPS51-213ENST00000533827 NT5DC1Q5TFE4 455 aa19.2■□□□□ 0.66
VPS51-213ENST00000533827 KRT79Q5XKE5 535 aa19.2■□□□□ 0.66
VPS51-213ENST00000533827 DTHD1Q6ZMT9 781 aa19.2■□□□□ 0.66
VPS51-213ENST00000533827 CCDC149Q6ZUS6 474 aa19.2■□□□□ 0.66
VPS51-213ENST00000533827 SUGP1Q8IWZ8 645 aaKnown RBP19.2■□□□□ 0.66
VPS51-213ENST00000533827 UBALD2Q8IYN6 164 aa19.2■□□□□ 0.66
VPS51-213ENST00000533827 DAW1Q8N136 415 aa19.2■□□□□ 0.66
VPS51-213ENST00000533827 HDAC7Q8WUI4 952 aa19.2■□□□□ 0.66
VPS51-213ENST00000533827 MMTAG2Q9BU76 263 aaKnown RBP19.2■□□□□ 0.66
VPS51-213ENST00000533827 RHOBTB2Q9BYZ6 727 aa19.2■□□□□ 0.66
VPS51-213ENST00000533827 FNIP2Q9P278 1114 aa19.2■□□□□ 0.66
VPS51-213ENST00000533827 LIMD1Q9UGP4 676 aa19.2■□□□□ 0.66
VPS51-213ENST00000533827 DPP7Q9UHL4 492 aa19.2■□□□□ 0.66
VPS51-213ENST00000533827 MUC6Q6W4X9 2439 aa19.2■□□□□ 0.66
VPS51-213ENST00000533827 CCDC195A0A1B0GUA6 201 aa19.19■□□□□ 0.66
VPS51-213ENST00000533827 CASTOR2A6NHX0 329 aa19.19■□□□□ 0.66
VPS51-213ENST00000533827 ASGR2P07307 311 aa19.19■□□□□ 0.66
VPS51-213ENST00000533827 DCAF4L1Q3SXM0 396 aa19.19■□□□□ 0.66
VPS51-213ENST00000533827 RTP2Q5QGT7 225 aa19.19■□□□□ 0.66
VPS51-213ENST00000533827 MCTP1Q6DN14 999 aa19.19■□□□□ 0.66
VPS51-213ENST00000533827 CYP26C1Q6V0L0 522 aa19.19■□□□□ 0.66
VPS51-213ENST00000533827 KCNK18Q7Z418 384 aa19.19■□□□□ 0.66
VPS51-213ENST00000533827 RIN2Q8WYP3 895 aaPredicted RBP19.19■□□□□ 0.66
VPS51-213ENST00000533827 K7ERI5 159 aa19.18■□□□□ 0.66
VPS51-213ENST00000533827 TGM5O43548 720 aa19.18■□□□□ 0.66
VPS51-213ENST00000533827 KIF4AO95239 1232 aa19.18■□□□□ 0.66
VPS51-213ENST00000533827 GJB2P29033 226 aa19.18■□□□□ 0.66
VPS51-213ENST00000533827 NPTX2P47972 431 aa19.18■□□□□ 0.66
VPS51-213ENST00000533827 PEX3P56589 373 aa19.18■□□□□ 0.66
VPS51-213ENST00000533827 ATP2C1P98194 919 aaPredicted RBP19.18■□□□□ 0.66
VPS51-213ENST00000533827 ATF7IP2Q5U623 682 aa19.18■□□□□ 0.66
VPS51-213ENST00000533827 RINT1Q6NUQ1 792 aa19.18■□□□□ 0.66
VPS51-213ENST00000533827 LILRA6Q6PI73 481 aa19.18■□□□□ 0.66
VPS51-213ENST00000533827 ELMSAN1Q6PJG2 1045 aa19.18■□□□□ 0.66
VPS51-213ENST00000533827 OTOP3Q7RTS5 596 aa19.18■□□□□ 0.66
VPS51-213ENST00000533827 PALB2Q86YC2 1186 aa19.18■□□□□ 0.66
VPS51-213ENST00000533827 PRSS33Q8NF86 280 aa19.18■□□□□ 0.66
VPS51-213ENST00000533827 HASPINQ8TF76 798 aa19.18■□□□□ 0.66
VPS51-213ENST00000533827 ACSF2Q96CM8 615 aaPredicted RBP19.18■□□□□ 0.66
VPS51-213ENST00000533827 RUSC1Q9BVN2 902 aa19.18■□□□□ 0.66
VPS51-213ENST00000533827 SMOC2Q9H3U7 446 aa19.18■□□□□ 0.66
VPS51-213ENST00000533827 PLEKHA4Q9H4M7 779 aa19.18■□□□□ 0.66
VPS51-213ENST00000533827 TNFSF13BQ9Y275 285 aa19.18■□□□□ 0.66
VPS51-213ENST00000533827 GDAQ9Y2T3 454 aa19.18■□□□□ 0.66
VPS51-213ENST00000533827 SF3B1O75533 1304 aaKnown RBP eCLIP19.18■□□□□ 0.663e-6■■■■■ 137.9
VPS51-213ENST00000533827 MTCL1Q9Y4B5 1905 aaKnown RBP19.17■□□□□ 0.66
VPS51-213ENST00000533827 MYO10Q9HD67 2058 aa19.17■□□□□ 0.66
VPS51-213ENST00000533827 HIP1RO75146 1068 aa19.17■□□□□ 0.66
VPS51-213ENST00000533827 RFPL2O75678 378 aa19.17■□□□□ 0.66
VPS51-213ENST00000533827 PDGFBP01127 241 aaPredicted RBP19.17■□□□□ 0.66
VPS51-213ENST00000533827 SPATA31D3P0C874 917 aa19.17■□□□□ 0.66
VPS51-213ENST00000533827 MYBP10242 640 aa19.17■□□□□ 0.66
VPS51-213ENST00000533827 VCPP55072 806 aaKnown RBP19.17■□□□□ 0.66
VPS51-213ENST00000533827 CREMQ03060 361 aa19.17■□□□□ 0.66
VPS51-213ENST00000533827 MAPK7Q13164 816 aa19.17■□□□□ 0.66
VPS51-213ENST00000533827 HYIQ5T013 277 aa19.17■□□□□ 0.66
VPS51-213ENST00000533827 PRSS55Q6UWB4 352 aaPredicted RBP19.17■□□□□ 0.66
VPS51-213ENST00000533827 SPATA31D4Q6ZUB0 917 aa19.17■□□□□ 0.66
VPS51-213ENST00000533827 C1orf186Q6ZWK4 172 aa19.17■□□□□ 0.66
VPS51-213ENST00000533827 ZNF707Q96C28 371 aaPredicted RBP19.17■□□□□ 0.66
VPS51-213ENST00000533827 TMEM134Q9H6X4 195 aa19.17■□□□□ 0.66
VPS51-213ENST00000533827 WDR6Q9NNW5 1121 aaKnown RBP19.17■□□□□ 0.66
VPS51-213ENST00000533827 ARHGAP28Q9P2N2 729 aa19.17■□□□□ 0.66
VPS51-213ENST00000533827 PHLPP2Q6ZVD8 1323 aa19.17■□□□□ 0.66
VPS51-213ENST00000533827 CCDC169A6NNP5 214 aa19.16■□□□□ 0.66
VPS51-213ENST00000533827 RPL17P18621 184 aaKnown RBP19.16■□□□□ 0.66
VPS51-213ENST00000533827 TAS1R3Q7RTX0 852 aa19.16■□□□□ 0.66
VPS51-213ENST00000533827 GLYCTKQ8IVS8 523 aa19.16■□□□□ 0.66
VPS51-213ENST00000533827 DRC1Q96MC2 740 aa19.16■□□□□ 0.66
VPS51-213ENST00000533827 PNMA5Q96PV4 448 aa19.16■□□□□ 0.66
VPS51-213ENST00000533827 ACO2Q99798 780 aaKnown RBP19.16■□□□□ 0.66
VPS51-213ENST00000533827 PRRX2Q99811 253 aa19.16■□□□□ 0.66
VPS51-213ENST00000533827 TTPALQ9BTX7 342 aa19.16■□□□□ 0.66
VPS51-213ENST00000533827 PTPRHQ9HD43 1115 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms