RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 CSRNP2Q9H175 543 aa10.3□□□□□ -0.76
PACS1-214ENST00000533811 DHX33Q9H6R0 707 aaKnown RBP10.3□□□□□ -0.76
PACS1-214ENST00000533811 DDX25Q9UHL0 483 aaKnown RBP10.3□□□□□ -0.76
PACS1-214ENST00000533811 FBXW11Q9UKB1 542 aa10.3□□□□□ -0.76
PACS1-214ENST00000533811 RAB23Q9ULC3 237 aa10.3□□□□□ -0.76
PACS1-214ENST00000533811 GIT1Q9Y2X7 761 aa10.3□□□□□ -0.76
PACS1-214ENST00000533811 SF3B1O75533 1304 aaKnown RBP eCLIP10.3□□□□□ -0.76
PACS1-214ENST00000533811 CASTOR2A6NHX0 329 aa10.29□□□□□ -0.76
PACS1-214ENST00000533811 NCAM2O15394 837 aa10.29□□□□□ -0.76
PACS1-214ENST00000533811 ASAP2O43150 1006 aa10.29□□□□□ -0.76
PACS1-214ENST00000533811 SLC37A4O43826 429 aa10.29□□□□□ -0.76
PACS1-214ENST00000533811 P4HBP07237 508 aaKnown RBP10.29□□□□□ -0.76
PACS1-214ENST00000533811 HMGB1P09429 215 aaKnown RBP10.29□□□□□ -0.76
PACS1-214ENST00000533811 HNRNPA1P09651 372 aaKnown RBP eCLIP10.29□□□□□ -0.76
PACS1-214ENST00000533811 AXLP30530 894 aa10.29□□□□□ -0.76
PACS1-214ENST00000533811 MAGEA9P43362 315 aa10.29□□□□□ -0.76
PACS1-214ENST00000533811 SPEM2Q0P670 501 aa10.29□□□□□ -0.76
PACS1-214ENST00000533811 GRIK3Q13003 919 aa10.29□□□□□ -0.76
PACS1-214ENST00000533811 HSP90AA2PQ14568 343 aaPredicted RBP10.29□□□□□ -0.76
PACS1-214ENST00000533811 INF2Q27J81 1249 aa10.29□□□□□ -0.76
PACS1-214ENST00000533811 FAM171A1Q5VUB5 890 aa10.29□□□□□ -0.76
PACS1-214ENST00000533811 ERICH6BQ5W0A0 696 aa10.29□□□□□ -0.76
PACS1-214ENST00000533811 PRR23BQ6ZRT6 265 aa10.29□□□□□ -0.76
PACS1-214ENST00000533811 ZBTB44Q8NCP5 570 aa10.29□□□□□ -0.76
PACS1-214ENST00000533811 SLC7A14Q8TBB6 771 aa10.29□□□□□ -0.76
PACS1-214ENST00000533811 CCDC51Q96ER9 411 aa10.29□□□□□ -0.76
PACS1-214ENST00000533811 BORCS6Q96GS4 357 aa10.29□□□□□ -0.76
PACS1-214ENST00000533811 MBOAT7Q96N66 472 aa10.29□□□□□ -0.76
PACS1-214ENST00000533811 MTRQ99707 1265 aa10.29□□□□□ -0.76
PACS1-214ENST00000533811 LXNQ9BS40 222 aa10.29□□□□□ -0.76
PACS1-214ENST00000533811 TTPALQ9BTX7 342 aa10.29□□□□□ -0.76
PACS1-214ENST00000533811 OSBPL6Q9BZF3 934 aa10.29□□□□□ -0.76
PACS1-214ENST00000533811 EPC1Q9H2F5 836 aa10.29□□□□□ -0.76
PACS1-214ENST00000533811 NCOA5Q9HCD5 579 aaKnown RBP10.29□□□□□ -0.76
PACS1-214ENST00000533811 HCFC1R1Q9NWW0 138 aa10.29□□□□□ -0.76
PACS1-214ENST00000533811 WRAP73Q9P2S5 460 aaPredicted RBP10.29□□□□□ -0.76
PACS1-214ENST00000533811 NDRG2Q9UN36 371 aaKnown RBP10.29□□□□□ -0.76
PACS1-214ENST00000533811 PCDHA4Q9UN74 947 aa10.29□□□□□ -0.76
PACS1-214ENST00000533811 KMT2BQ9UMN6 2715 aaPredicted RBP10.29□□□□□ -0.76
PACS1-214ENST00000533811 NOTCH4Q99466 2003 aa10.29□□□□□ -0.76
PACS1-214ENST00000533811 VWA8A3KMH1 1905 aa10.29□□□□□ -0.76
PACS1-214ENST00000533811 CYP3A7-CYP3A51PA0A087WV96 503 aa10.28□□□□□ -0.76
PACS1-214ENST00000533811 ZBTB39O15060 712 aa10.28□□□□□ -0.76
PACS1-214ENST00000533811 TBC1D4O60343 1298 aa10.28□□□□□ -0.76
PACS1-214ENST00000533811 PAPLNO95428 1278 aa10.28□□□□□ -0.76
PACS1-214ENST00000533811 C1RP00736 705 aa10.28□□□□□ -0.76
PACS1-214ENST00000533811 CYP3A7P24462 503 aa10.28□□□□□ -0.76
PACS1-214ENST00000533811 YWHABP31946 246 aaKnown RBP10.28□□□□□ -0.76
PACS1-214ENST00000533811 PTENP60484 403 aa10.28□□□□□ -0.76
PACS1-214ENST00000533811 CYP4A11Q02928 519 aa10.28□□□□□ -0.76
PACS1-214ENST00000533811 TFDP1Q14186 410 aa10.28□□□□□ -0.76
PACS1-214ENST00000533811 NTRK3Q16288 839 aa10.28□□□□□ -0.76
PACS1-214ENST00000533811 PABPC1LQ4VXU2 614 aaKnown RBP10.28□□□□□ -0.76
PACS1-214ENST00000533811 PPM1JQ5JR12 505 aa10.28□□□□□ -0.76
PACS1-214ENST00000533811 NCAPH2Q6IBW4 605 aa10.28□□□□□ -0.76
PACS1-214ENST00000533811 BLOC1S2Q6QNY1 142 aa10.28□□□□□ -0.76
PACS1-214ENST00000533811 RSPO2Q6UXX9 243 aaPredicted RBP10.28□□□□□ -0.76
PACS1-214ENST00000533811 OTUD6AQ7L8S5 288 aa10.28□□□□□ -0.76
PACS1-214ENST00000533811 NPAS3Q8IXF0 933 aa10.28□□□□□ -0.76
PACS1-214ENST00000533811 GPR65Q8IYL9 337 aa10.28□□□□□ -0.76
PACS1-214ENST00000533811 TRIM22Q8IYM9 498 aa10.28□□□□□ -0.76
PACS1-214ENST00000533811 BLIDQ8IZY5 108 aa10.28□□□□□ -0.76
PACS1-214ENST00000533811 MCRS1Q96EZ8 462 aa10.28□□□□□ -0.76
PACS1-214ENST00000533811 DYDC2Q96IM9 177 aa10.28□□□□□ -0.76
PACS1-214ENST00000533811 CCDC43Q96MW1 224 aaKnown RBP10.28□□□□□ -0.76
PACS1-214ENST00000533811 CLSTN3Q9BQT9 956 aa10.28□□□□□ -0.76
PACS1-214ENST00000533811 PAAF1Q9BRP4 392 aa10.28□□□□□ -0.76
PACS1-214ENST00000533811 PARD6AQ9NPB6 346 aa10.28□□□□□ -0.76
PACS1-214ENST00000533811 SH3GLB2Q9NR46 395 aa10.28□□□□□ -0.76
PACS1-214ENST00000533811 HEBP1Q9NRV9 189 aa10.28□□□□□ -0.76
PACS1-214ENST00000533811 RGL1Q9NZL6 768 aa10.28□□□□□ -0.76
PACS1-214ENST00000533811 MRPS17Q9Y2R5 130 aaKnown RBP10.28□□□□□ -0.76
PACS1-214ENST00000533811 PPME1Q9Y570 386 aa10.28□□□□□ -0.76
PACS1-214ENST00000533811 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.28□□□□□ -0.76
PACS1-214ENST00000533811 NID2Q14112 1375 aa10.27□□□□□ -0.76
PACS1-214ENST00000533811 ADAM12O43184 909 aa10.27□□□□□ -0.77
PACS1-214ENST00000533811 B4GALT5O43286 388 aa10.27□□□□□ -0.77
PACS1-214ENST00000533811 LILRB5O75023 590 aa10.27□□□□□ -0.77
PACS1-214ENST00000533811 KIF4AO95239 1232 aa10.27□□□□□ -0.77
PACS1-214ENST00000533811 ADRB1P08588 477 aa10.27□□□□□ -0.77
PACS1-214ENST00000533811 IFNAR1P17181 557 aa10.27□□□□□ -0.77
PACS1-214ENST00000533811 ARF4P18085 180 aaPredicted RBP10.27□□□□□ -0.77
PACS1-214ENST00000533811 MBTD1Q05BQ5 628 aa10.27□□□□□ -0.77
PACS1-214ENST00000533811 SSRP1Q08945 709 aaKnown RBP10.27□□□□□ -0.77
PACS1-214ENST00000533811 MTAPQ13126 283 aa10.27□□□□□ -0.77
PACS1-214ENST00000533811 PPP2R5CQ13362 524 aa10.27□□□□□ -0.77
PACS1-214ENST00000533811 CTTNQ14247 550 aaKnown RBP10.27□□□□□ -0.77
PACS1-214ENST00000533811 MXD4Q14582 209 aaPredicted RBP10.27□□□□□ -0.77
PACS1-214ENST00000533811 TMEM132AQ24JP5 1023 aa10.27□□□□□ -0.77
PACS1-214ENST00000533811 TSGA10IPQ3SY00 556 aa10.27□□□□□ -0.77
PACS1-214ENST00000533811 AXDND1Q5T1B0 1012 aaPredicted RBP10.27□□□□□ -0.77
PACS1-214ENST00000533811 MOXD1Q6UVY6 613 aa10.27□□□□□ -0.77
PACS1-214ENST00000533811 ZNF852Q6ZMS4 543 aa10.27□□□□□ -0.77
PACS1-214ENST00000533811 ASAP3Q8TDY4 903 aa10.27□□□□□ -0.77
PACS1-214ENST00000533811 PIK3R5Q8WYR1 880 aa10.27□□□□□ -0.77
PACS1-214ENST00000533811 NELL2Q99435 816 aa10.27□□□□□ -0.77
PACS1-214ENST00000533811 VAV3Q9UKW4 847 aa10.27□□□□□ -0.77
PACS1-214ENST00000533811 MRPS23Q9Y3D9 190 aaKnown RBP10.27□□□□□ -0.77
PACS1-214ENST00000533811 F5P12259 2224 aa10.27□□□□□ -0.77
PACS1-214ENST00000533811 TICRRQ7Z2Z1 1910 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms