RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 PSAPP07602 524 aa10.47□□□□□ -0.73
CHKA-207ENST00000533728 H2AFZP0C0S5 128 aa10.47□□□□□ -0.73
CHKA-207ENST00000533728 MYCLP12524 364 aaPredicted RBP10.47□□□□□ -0.73
CHKA-207ENST00000533728 ALADP13716 330 aa10.47□□□□□ -0.73
CHKA-207ENST00000533728 KCNA2P16389 499 aa10.47□□□□□ -0.73
CHKA-207ENST00000533728 KLRC1P26715 233 aa10.47□□□□□ -0.73
CHKA-207ENST00000533728 HADHBP55084 474 aaKnown RBP10.47□□□□□ -0.73
CHKA-207ENST00000533728 DMTNQ08495 405 aa10.47□□□□□ -0.73
CHKA-207ENST00000533728 SNAPC2Q13487 334 aa10.47□□□□□ -0.73
CHKA-207ENST00000533728 SKIV2LQ15477 1246 aaKnown RBP10.47□□□□□ -0.73
CHKA-207ENST00000533728 SNRNP48Q6IEG0 339 aaKnown RBP10.47□□□□□ -0.73
CHKA-207ENST00000533728 NSMFQ6X4W1 530 aa10.47□□□□□ -0.73
CHKA-207ENST00000533728 H2AFVQ71UI9 128 aa10.47□□□□□ -0.73
CHKA-207ENST00000533728 SLFN11Q7Z7L1 901 aa10.47□□□□□ -0.73
CHKA-207ENST00000533728 MAP4K3Q8IVH8 894 aa10.47□□□□□ -0.73
CHKA-207ENST00000533728 EIF1ADQ8N9N8 165 aaKnown RBP10.47□□□□□ -0.73
CHKA-207ENST00000533728 PROCA1Q8NCQ7 364 aaPredicted RBP10.47□□□□□ -0.73
CHKA-207ENST00000533728 SLC30A5Q8TAD4 765 aa10.47□□□□□ -0.73
CHKA-207ENST00000533728 TMC2Q8TDI7 906 aa10.47□□□□□ -0.73
CHKA-207ENST00000533728 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.47□□□□□ -0.733e-6■■■■■ 50.8
CHKA-207ENST00000533728 PBKQ96KB5 322 aa10.47□□□□□ -0.73
CHKA-207ENST00000533728 INTS2Q9H0H0 1204 aaKnown RBP10.47□□□□□ -0.73
CHKA-207ENST00000533728 CD320Q9NPF0 282 aa10.47□□□□□ -0.73
CHKA-207ENST00000533728 ADAMTS1Q9UHI8 967 aa10.47□□□□□ -0.73
CHKA-207ENST00000533728 SALL4Q9UJQ4 1053 aa10.47□□□□□ -0.73
CHKA-207ENST00000533728 TFR2Q9UP52 801 aa10.47□□□□□ -0.73
CHKA-207ENST00000533728 DIS3Q9Y2L1 958 aaKnown RBP10.47□□□□□ -0.73
CHKA-207ENST00000533728 SAMM50Q9Y512 469 aa10.47□□□□□ -0.73
CHKA-207ENST00000533728 DDX39AO00148 427 aaKnown RBP10.46□□□□□ -0.73
CHKA-207ENST00000533728 PDE2AO00408 941 aaPredicted RBP10.46□□□□□ -0.73
CHKA-207ENST00000533728 DGAT1O75907 488 aa10.46□□□□□ -0.73
CHKA-207ENST00000533728 SEC31AO94979 1220 aaKnown RBP10.46□□□□□ -0.73
CHKA-207ENST00000533728 STBD1O95210 358 aa10.46□□□□□ -0.73
CHKA-207ENST00000533728 RHOXF2BP0C7M4 288 aa10.46□□□□□ -0.73
CHKA-207ENST00000533728 ACTN1P12814 892 aa10.46□□□□□ -0.73
CHKA-207ENST00000533728 ERCC3P19447 782 aa10.46□□□□□ -0.73
CHKA-207ENST00000533728 GARTP22102 1010 aa10.46□□□□□ -0.73
CHKA-207ENST00000533728 COPB2P35606 906 aa10.46□□□□□ -0.73
CHKA-207ENST00000533728 CYP2J2P51589 502 aa10.46□□□□□ -0.73
CHKA-207ENST00000533728 VAMP7P51809 220 aa10.46□□□□□ -0.73
CHKA-207ENST00000533728 VSNL1P62760 191 aa10.46□□□□□ -0.73
CHKA-207ENST00000533728 DMP1Q13316 513 aaPredicted RBP10.46□□□□□ -0.73
CHKA-207ENST00000533728 CLUL1Q15846 466 aa10.46□□□□□ -0.73
CHKA-207ENST00000533728 EPC2Q52LR7 807 aa10.46□□□□□ -0.73
CHKA-207ENST00000533728 XKR9Q5GH70 373 aa10.46□□□□□ -0.73
CHKA-207ENST00000533728 CCDC181Q5TID7 509 aa10.46□□□□□ -0.73
CHKA-207ENST00000533728 SAMD1Q6SPF0 538 aaPredicted RBP10.46□□□□□ -0.73
CHKA-207ENST00000533728 LBX2Q6XYB7 198 aa10.46□□□□□ -0.73
CHKA-207ENST00000533728 ANKRD23Q86SG2 305 aa10.46□□□□□ -0.73
CHKA-207ENST00000533728 MICALL1Q8N3F8 863 aa10.46□□□□□ -0.73
CHKA-207ENST00000533728 SPATA4Q8NEY3 305 aa10.46□□□□□ -0.73
CHKA-207ENST00000533728 PRSS33Q8NF86 280 aa10.46□□□□□ -0.73
CHKA-207ENST00000533728 LMO3Q8TAP4 145 aa10.46□□□□□ -0.73
CHKA-207ENST00000533728 RHOXF2Q9BQY4 288 aa10.46□□□□□ -0.73
CHKA-207ENST00000533728 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.46□□□□□ -0.73
CHKA-207ENST00000533728 EPC1Q9H2F5 836 aa10.46□□□□□ -0.73
CHKA-207ENST00000533728 HMX1Q9NP08 348 aaPredicted RBP10.46□□□□□ -0.73
CHKA-207ENST00000533728 ABCB6Q9NP58 842 aa10.46□□□□□ -0.73
CHKA-207ENST00000533728 MED4Q9NPJ6 270 aa10.46□□□□□ -0.73
CHKA-207ENST00000533728 PDLIM7Q9NR12 457 aa10.46□□□□□ -0.73
CHKA-207ENST00000533728 HOMER2Q9NSB8 354 aa10.46□□□□□ -0.73
CHKA-207ENST00000533728 CYP39A1Q9NYL5 469 aa10.46□□□□□ -0.73
CHKA-207ENST00000533728 HSPBP1Q9NZL4 362 aa10.46□□□□□ -0.73
CHKA-207ENST00000533728 DNAJC12Q9UKB3 198 aa10.46□□□□□ -0.73
CHKA-207ENST00000533728 COQ4Q9Y3A0 265 aa10.46□□□□□ -0.73
CHKA-207ENST00000533728 IGSF9BQ9UPX0 1349 aa10.46□□□□□ -0.73
CHKA-207ENST00000533728 VPS13AQ96RL7 3174 aa10.46□□□□□ -0.74
CHKA-207ENST00000533728 LOC102724159A0A0B4J2E5 919 aa10.45□□□□□ -0.74
CHKA-207ENST00000533728 A0A0U1RQG5 324 aaPredicted RBP10.45□□□□□ -0.74
CHKA-207ENST00000533728 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.45□□□□□ -0.74
CHKA-207ENST00000533728 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.45□□□□□ -0.74
CHKA-207ENST00000533728 SPDYE16A6NNV3 312 aaPredicted RBP10.45□□□□□ -0.74
CHKA-207ENST00000533728 TULP1O00294 542 aaPredicted RBP10.45□□□□□ -0.74
CHKA-207ENST00000533728 BACH1O14867 736 aa10.45□□□□□ -0.74
CHKA-207ENST00000533728 SRGAP2O75044 1071 aa10.45□□□□□ -0.74
CHKA-207ENST00000533728 ATP9AO75110 1047 aa10.45□□□□□ -0.74
CHKA-207ENST00000533728 PALMO75781 387 aa10.45□□□□□ -0.74
CHKA-207ENST00000533728 SASH3O75995 380 aa10.45□□□□□ -0.74
CHKA-207ENST00000533728 ATG7O95352 703 aa10.45□□□□□ -0.74
CHKA-207ENST00000533728 TMEM253P0C7T8 217 aa10.45□□□□□ -0.74
CHKA-207ENST00000533728 AARSP49588 968 aaKnown RBP eCLIP10.45□□□□□ -0.74
CHKA-207ENST00000533728 HMGCS2P54868 508 aa10.45□□□□□ -0.74
CHKA-207ENST00000533728 NNTQ13423 1086 aa10.45□□□□□ -0.74
CHKA-207ENST00000533728 SMC1AQ14683 1233 aaKnown RBP10.45□□□□□ -0.74
CHKA-207ENST00000533728 DRAP1Q14919 205 aaPredicted RBP10.45□□□□□ -0.74
CHKA-207ENST00000533728 TMEM132BQ14DG7 1078 aa10.45□□□□□ -0.74
CHKA-207ENST00000533728 PWP2Q15269 919 aaKnown RBP10.45□□□□□ -0.74
CHKA-207ENST00000533728 TERF2Q15554 542 aa10.45□□□□□ -0.74
CHKA-207ENST00000533728 UGCGQ16739 394 aa10.45□□□□□ -0.74
CHKA-207ENST00000533728 GPAT2Q6NUI2 795 aa10.45□□□□□ -0.74
CHKA-207ENST00000533728 MIS18BP1Q6P0N0 1132 aa10.45□□□□□ -0.74
CHKA-207ENST00000533728 CCNI2Q6ZMN8 369 aaPredicted RBP10.45□□□□□ -0.74
CHKA-207ENST00000533728 FASTKD5Q7L8L6 764 aaKnown RBP10.45□□□□□ -0.74
CHKA-207ENST00000533728 RIOX2Q8IUF8 465 aa10.45□□□□□ -0.74
CHKA-207ENST00000533728 LRRC57Q8N9N7 239 aa10.45□□□□□ -0.74
CHKA-207ENST00000533728 TMEM161BQ8NDZ6 487 aa10.45□□□□□ -0.74
CHKA-207ENST00000533728 PKNOX2Q96KN3 472 aa10.45□□□□□ -0.74
CHKA-207ENST00000533728 SELENOOQ9BVL4 669 aa10.45□□□□□ -0.74
CHKA-207ENST00000533728 BCAS3Q9H6U6 928 aa10.45□□□□□ -0.74
CHKA-207ENST00000533728 KIAA1586Q9HCI6 787 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms