RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 TMEM117Q9H0C3 514 aa13.89□□□□□ -0.19
RPUSD4-208ENST00000533628 AGPAT3Q9NRZ7 376 aa13.89□□□□□ -0.19
RPUSD4-208ENST00000533628 TMEM63CQ9P1W3 806 aa13.89□□□□□ -0.19
RPUSD4-208ENST00000533628 MAPK8IP1Q9UQF2 711 aa13.89□□□□□ -0.19
RPUSD4-208ENST00000533628 GIT1Q9Y2X7 761 aa13.89□□□□□ -0.19
RPUSD4-208ENST00000533628 INSL6Q9Y581 213 aa13.89□□□□□ -0.19
RPUSD4-208ENST00000533628 BIN1O00499 593 aa13.89□□□□□ -0.19
RPUSD4-208ENST00000533628 SOX1O00570 391 aaPredicted RBP13.89□□□□□ -0.19
RPUSD4-208ENST00000533628 OGTO15294 1046 aa13.89□□□□□ -0.19
RPUSD4-208ENST00000533628 HOXA2O43364 376 aa13.89□□□□□ -0.19
RPUSD4-208ENST00000533628 TLL1O43897 1013 aa13.89□□□□□ -0.19
RPUSD4-208ENST00000533628 CD44P16070 742 aaKnown RBP13.89□□□□□ -0.19
RPUSD4-208ENST00000533628 SNRPFP62306 86 aaKnown RBP13.89□□□□□ -0.19
RPUSD4-208ENST00000533628 SEZ6Q53EL9 994 aa13.89□□□□□ -0.19
RPUSD4-208ENST00000533628 XKR4Q5GH76 650 aa13.89□□□□□ -0.19
RPUSD4-208ENST00000533628 CRELD2Q6UXH1 353 aaPredicted RBP13.89□□□□□ -0.19
RPUSD4-208ENST00000533628 ALKAL1Q6UXT8 129 aa13.89□□□□□ -0.19
RPUSD4-208ENST00000533628 LRRC55Q6ZSA7 311 aa13.89□□□□□ -0.19
RPUSD4-208ENST00000533628 APBB1IPQ7Z5R6 666 aaPredicted RBP13.89□□□□□ -0.19
RPUSD4-208ENST00000533628 C12orf56Q8IXR9 622 aa13.89□□□□□ -0.19
RPUSD4-208ENST00000533628 THNSL1Q8IYQ7 743 aa13.89□□□□□ -0.19
RPUSD4-208ENST00000533628 CMTR2Q8IYT2 770 aaKnown RBP13.89□□□□□ -0.19
RPUSD4-208ENST00000533628 TRIML1Q8N9V2 468 aa13.89□□□□□ -0.19
RPUSD4-208ENST00000533628 HELQQ8TDG4 1101 aa13.89□□□□□ -0.19
RPUSD4-208ENST00000533628 TMEM174Q8WUU8 243 aa13.89□□□□□ -0.19
RPUSD4-208ENST00000533628 GTPBP4Q9BZE4 634 aaKnown RBP13.89□□□□□ -0.19
RPUSD4-208ENST00000533628 RSAD1Q9HA92 442 aa13.89□□□□□ -0.19
RPUSD4-208ENST00000533628 UBN1Q9NPG3 1134 aa13.89□□□□□ -0.19
RPUSD4-208ENST00000533628 MIOSQ9NXC5 875 aa13.89□□□□□ -0.19
RPUSD4-208ENST00000533628 PPP1R3GB7ZBB8 358 aa13.88□□□□□ -0.19
RPUSD4-208ENST00000533628 RECQL4O94761 1208 aa13.88□□□□□ -0.19
RPUSD4-208ENST00000533628 ADRB2P07550 413 aa13.88□□□□□ -0.19
RPUSD4-208ENST00000533628 HARSP12081 509 aaKnown RBP13.88□□□□□ -0.19
RPUSD4-208ENST00000533628 TNFSF9P41273 254 aa13.88□□□□□ -0.19
RPUSD4-208ENST00000533628 ZCWPW2Q504Y3 356 aa13.88□□□□□ -0.19
RPUSD4-208ENST00000533628 ADSSL1Q8N142 457 aa13.88□□□□□ -0.19
RPUSD4-208ENST00000533628 YME1L1Q96TA2 773 aa13.88□□□□□ -0.19
RPUSD4-208ENST00000533628 GAD1Q99259 594 aa13.88□□□□□ -0.19
RPUSD4-208ENST00000533628 ZBED2Q9BTP6 218 aa13.88□□□□□ -0.19
RPUSD4-208ENST00000533628 MSTO1Q9BUK6 570 aa13.88□□□□□ -0.19
RPUSD4-208ENST00000533628 APOL6Q9BWW8 343 aa13.88□□□□□ -0.19
RPUSD4-208ENST00000533628 SEMA6BQ9H3T3 888 aa13.88□□□□□ -0.19
RPUSD4-208ENST00000533628 CPSF3Q9UKF6 684 aaKnown RBP13.88□□□□□ -0.19
RPUSD4-208ENST00000533628 AGO2Q9UKV8 859 aaKnown RBP13.88□□□□□ -0.19
RPUSD4-208ENST00000533628 LAMA2P24043 3122 aaKnown RBP13.88□□□□□ -0.19
RPUSD4-208ENST00000533628 PDXKO00764 312 aa13.87□□□□□ -0.19
RPUSD4-208ENST00000533628 KLHL40Q2TBA0 621 aa13.87□□□□□ -0.19
RPUSD4-208ENST00000533628 SLC10A6Q3KNW5 377 aa13.87□□□□□ -0.19
RPUSD4-208ENST00000533628 HACE1Q8IYU2 909 aa13.87□□□□□ -0.19
RPUSD4-208ENST00000533628 POMGNT1Q8WZA1 660 aa13.87□□□□□ -0.19
RPUSD4-208ENST00000533628 ZFP42Q96MM3 310 aa13.87□□□□□ -0.19
RPUSD4-208ENST00000533628 CCDC94Q9BW85 323 aaPredicted RBP13.87□□□□□ -0.19
RPUSD4-208ENST00000533628 TYW1Q9NV66 732 aaKnown RBP13.87□□□□□ -0.19
RPUSD4-208ENST00000533628 DMAC2Q9NW81 257 aa13.87□□□□□ -0.19
RPUSD4-208ENST00000533628 KLK14Q9P0G3 267 aa13.87□□□□□ -0.19
RPUSD4-208ENST00000533628 CGNQ9P2M7 1197 aaKnown RBP13.87□□□□□ -0.19
RPUSD4-208ENST00000533628 PARP2Q9UGN5 583 aa13.87□□□□□ -0.19
RPUSD4-208ENST00000533628 TRAF3IP3Q9Y228 551 aa13.87□□□□□ -0.19
RPUSD4-208ENST00000533628 ARL5CA6NH57 179 aa13.87□□□□□ -0.19
RPUSD4-208ENST00000533628 TBKBP1A7MCY6 615 aa13.87□□□□□ -0.19
RPUSD4-208ENST00000533628 CLTAP09496 248 aa13.87□□□□□ -0.19
RPUSD4-208ENST00000533628 MSNP26038 577 aaKnown RBP13.87□□□□□ -0.19
RPUSD4-208ENST00000533628 MLH1P40692 756 aa13.87□□□□□ -0.19
RPUSD4-208ENST00000533628 MATR3P43243 847 aaKnown RBP eCLIP13.87□□□□□ -0.19
RPUSD4-208ENST00000533628 OSTNP61366 133 aa13.87□□□□□ -0.19
RPUSD4-208ENST00000533628 RAB30Q15771 203 aa13.87□□□□□ -0.19
RPUSD4-208ENST00000533628 HS1BP3Q53T59 392 aa13.87□□□□□ -0.19
RPUSD4-208ENST00000533628 NOMO2Q5JPE7 1267 aa13.87□□□□□ -0.19
RPUSD4-208ENST00000533628 HABP4Q5JVS0 413 aaKnown RBP13.87□□□□□ -0.19
RPUSD4-208ENST00000533628 CCDC183Q5T5S1 534 aa13.87□□□□□ -0.19
RPUSD4-208ENST00000533628 CENPPQ6IPU0 288 aa13.87□□□□□ -0.19
RPUSD4-208ENST00000533628 GLB1LQ6UWU2 654 aa13.87□□□□□ -0.19
RPUSD4-208ENST00000533628 RSPH1Q8WYR4 309 aa13.87□□□□□ -0.19
RPUSD4-208ENST00000533628 FBXL18Q96ME1 805 aa13.87□□□□□ -0.19
RPUSD4-208ENST00000533628 ACAP3Q96P50 834 aa13.87□□□□□ -0.19
RPUSD4-208ENST00000533628 CWH43Q9H720 699 aa13.87□□□□□ -0.19
RPUSD4-208ENST00000533628 HCSTQ9UBK5 93 aa13.87□□□□□ -0.19
RPUSD4-208ENST00000533628 LINC01553A4QN01 128 aa13.86□□□□□ -0.19
RPUSD4-208ENST00000533628 PTGESO14684 152 aa13.86□□□□□ -0.19
RPUSD4-208ENST00000533628 CLIC2O15247 247 aa13.86□□□□□ -0.19
RPUSD4-208ENST00000533628 CA3P07451 260 aa13.86□□□□□ -0.19
RPUSD4-208ENST00000533628 DNAJB2P25686 324 aa13.86□□□□□ -0.19
RPUSD4-208ENST00000533628 POU5F1Q01860 360 aaKnown RBP13.86□□□□□ -0.19
RPUSD4-208ENST00000533628 ENOX2Q16206 610 aaKnown RBP13.86□□□□□ -0.19
RPUSD4-208ENST00000533628 NFIL3Q16649 462 aa13.86□□□□□ -0.19
RPUSD4-208ENST00000533628 KYAT1Q16773 422 aa13.86□□□□□ -0.19
RPUSD4-208ENST00000533628 PAN2Q504Q3 1202 aaKnown RBP13.86□□□□□ -0.19
RPUSD4-208ENST00000533628 ARMCX5Q6P1M9 558 aa13.86□□□□□ -0.19
RPUSD4-208ENST00000533628 SNX27Q96L92 541 aa13.86□□□□□ -0.19
RPUSD4-208ENST00000533628 NKX2-4Q9H2Z4 354 aa13.86□□□□□ -0.19
RPUSD4-208ENST00000533628 PCIF1Q9H4Z3 704 aa13.86□□□□□ -0.19
RPUSD4-208ENST00000533628 PLAGL2Q9UPG8 496 aa13.86□□□□□ -0.19
RPUSD4-208ENST00000533628 MRPL42Q9Y6G3 142 aaKnown RBP13.86□□□□□ -0.19
RPUSD4-208ENST00000533628 TRIOBPQ9H2D6 2365 aa13.86□□□□□ -0.19
RPUSD4-208ENST00000533628 LAMA3Q16787 3333 aa13.86□□□□□ -0.19
RPUSD4-208ENST00000533628 TTC26A0AVF1 554 aa13.86□□□□□ -0.19
RPUSD4-208ENST00000533628 KIAA0391O15091 583 aaKnown RBP13.86□□□□□ -0.19
RPUSD4-208ENST00000533628 EXTL3O43909 919 aa13.86□□□□□ -0.19
RPUSD4-208ENST00000533628 B4GALT3O60512 393 aa13.86□□□□□ -0.19
RPUSD4-208ENST00000533628 ACOT2P49753 483 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms