RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 KIAA1755Q5JYT7 1200 aa13.23□□□□□ -0.29
RAD50-209ENST00000533482 MMGT1Q8N4V1 131 aa13.23□□□□□ -0.29
RAD50-209ENST00000533482 MICAL1Q8TDZ2 1067 aa13.23□□□□□ -0.29
RAD50-209ENST00000533482 C9orf72Q96LT7 481 aa13.23□□□□□ -0.29
RAD50-209ENST00000533482 VIPAS39Q9H9C1 493 aa13.23□□□□□ -0.29
RAD50-209ENST00000533482 SUCLA2Q9P2R7 463 aaPredicted RBP13.23□□□□□ -0.29
RAD50-209ENST00000533482 MRC1P22897 1456 aa13.23□□□□□ -0.29
RAD50-209ENST00000533482 CALRP27797 417 aaKnown RBP13.23□□□□□ -0.29
RAD50-209ENST00000533482 MAP2K2P36507 400 aa13.23□□□□□ -0.29
RAD50-209ENST00000533482 MAGEA9P43362 315 aa13.23□□□□□ -0.29
RAD50-209ENST00000533482 EMC2Q15006 297 aa13.23□□□□□ -0.29
RAD50-209ENST00000533482 FIGNQ5HY92 759 aa13.23□□□□□ -0.29
RAD50-209ENST00000533482 CFAP57Q96MR6 1250 aa13.23□□□□□ -0.29
RAD50-209ENST00000533482 RCCD1A6NED2 376 aa13.23□□□□□ -0.29
RAD50-209ENST00000533482 RTN2O75298 545 aa13.23□□□□□ -0.29
RAD50-209ENST00000533482 PRKCBP05771 671 aa13.23□□□□□ -0.29
RAD50-209ENST00000533482 BRAFP15056 766 aa13.23□□□□□ -0.29
RAD50-209ENST00000533482 ACTR2P61160 394 aa13.23□□□□□ -0.29
RAD50-209ENST00000533482 PDE1BQ01064 536 aa13.23□□□□□ -0.29
RAD50-209ENST00000533482 RCN2Q14257 317 aa13.23□□□□□ -0.29
RAD50-209ENST00000533482 TPCN2Q8NHX9 752 aa13.23□□□□□ -0.29
RAD50-209ENST00000533482 FAM81BQ96LP2 452 aa13.23□□□□□ -0.29
RAD50-209ENST00000533482 KIAA1586Q9HCI6 787 aa13.23□□□□□ -0.29
RAD50-209ENST00000533482 FNDC3AQ9Y2H6 1198 aaKnown RBP13.23□□□□□ -0.29
RAD50-209ENST00000533482 SCINQ9Y6U3 715 aa13.23□□□□□ -0.29
RAD50-209ENST00000533482 XPOTO43592 962 aaKnown RBP13.22□□□□□ -0.29
RAD50-209ENST00000533482 MT-ND3P03897 115 aa13.22□□□□□ -0.29
RAD50-209ENST00000533482 GLI1P08151 1106 aa13.22□□□□□ -0.29
RAD50-209ENST00000533482 KRT17Q04695 432 aa13.22□□□□□ -0.29
RAD50-209ENST00000533482 GPS1Q13098 491 aa13.22□□□□□ -0.29
RAD50-209ENST00000533482 PSMD6Q15008 389 aa13.22□□□□□ -0.29
RAD50-209ENST00000533482 PDIK1LQ8N165 341 aa13.22□□□□□ -0.29
RAD50-209ENST00000533482 ZNF384Q8TF68 577 aa13.22□□□□□ -0.29
RAD50-209ENST00000533482 TMEM117Q9H0C3 514 aa13.22□□□□□ -0.29
RAD50-209ENST00000533482 DBR1Q9UK59 544 aaKnown RBP13.22□□□□□ -0.29
RAD50-209ENST00000533482 DIS3Q9Y2L1 958 aaKnown RBP13.22□□□□□ -0.29
RAD50-209ENST00000533482 PABPN1LA6NDY0 278 aaKnown RBP13.22□□□□□ -0.29
RAD50-209ENST00000533482 ARHGAP42A6NI28 874 aa13.22□□□□□ -0.29
RAD50-209ENST00000533482 WEE2P0C1S8 567 aa13.22□□□□□ -0.29
RAD50-209ENST00000533482 CYP2B6P20813 491 aa13.22□□□□□ -0.29
RAD50-209ENST00000533482 MRPS9P82933 396 aaKnown RBP13.22□□□□□ -0.29
RAD50-209ENST00000533482 SNCBQ16143 134 aa13.22□□□□□ -0.29
RAD50-209ENST00000533482 DUOXA2Q1HG44 320 aa13.22□□□□□ -0.29
RAD50-209ENST00000533482 CASKIN2Q8WXE0 1202 aa13.22□□□□□ -0.29
RAD50-209ENST00000533482 ATP2A3Q93084 1043 aa13.22□□□□□ -0.29
RAD50-209ENST00000533482 POLR3CQ9BUI4 534 aaPredicted RBP13.22□□□□□ -0.29
RAD50-209ENST00000533482 FMN2Q9NZ56 1722 aa13.22□□□□□ -0.29
RAD50-209ENST00000533482 PHF20L1A8MW92 1017 aa13.22□□□□□ -0.29
RAD50-209ENST00000533482 ADAMTS3O15072 1205 aa13.22□□□□□ -0.29
RAD50-209ENST00000533482 MED7O43513 233 aa13.22□□□□□ -0.29
RAD50-209ENST00000533482 TJP3O95049 919 aa13.22□□□□□ -0.29
RAD50-209ENST00000533482 CASP5P51878 434 aa13.22□□□□□ -0.29
RAD50-209ENST00000533482 GABPAQ06546 454 aa13.22□□□□□ -0.29
RAD50-209ENST00000533482 RSPH3Q86UC2 560 aa13.22□□□□□ -0.29
RAD50-209ENST00000533482 SYTL5Q8TDW5 730 aaPredicted RBP13.22□□□□□ -0.29
RAD50-209ENST00000533482 CFAP36Q96G28 342 aa13.22□□□□□ -0.29
RAD50-209ENST00000533482 GAKO14976 1311 aa13.21□□□□□ -0.29
RAD50-209ENST00000533482 M0QYV0 167 aa13.21□□□□□ -0.29
RAD50-209ENST00000533482 PDE2AO00408 941 aaPredicted RBP13.21□□□□□ -0.29
RAD50-209ENST00000533482 PLSCR1O15162 318 aa13.21□□□□□ -0.29
RAD50-209ENST00000533482 PSMC1P62191 440 aaKnown RBP13.21□□□□□ -0.29
RAD50-209ENST00000533482 WDR59Q6PJI9 974 aa13.21□□□□□ -0.29
RAD50-209ENST00000533482 DSTYKQ6XUX3 929 aa13.21□□□□□ -0.29
RAD50-209ENST00000533482 WNT8AQ9H1J5 351 aa13.21□□□□□ -0.29
RAD50-209ENST00000533482 PPP1R9AQ9ULJ8 1098 aa13.21□□□□□ -0.29
RAD50-209ENST00000533482 UBE4BO95155 1302 aa13.21□□□□□ -0.29
RAD50-209ENST00000533482 CTSHP09668 335 aa13.21□□□□□ -0.29
RAD50-209ENST00000533482 WDR93Q6P2C0 686 aa13.21□□□□□ -0.29
RAD50-209ENST00000533482 MMS22LQ6ZRQ5 1243 aa13.21□□□□□ -0.29
RAD50-209ENST00000533482 SRLQ86TD4 932 aa13.21□□□□□ -0.29
RAD50-209ENST00000533482 EXOC8Q8IYI6 725 aa13.21□□□□□ -0.29
RAD50-209ENST00000533482 IDI2Q9BXS1 227 aa13.21□□□□□ -0.29
RAD50-209ENST00000533482 PITPNM3Q9BZ71 974 aa13.21□□□□□ -0.29
RAD50-209ENST00000533482 SARNPP82979 210 aaKnown RBP13.21□□□□□ -0.3
RAD50-209ENST00000533482 MAP7D1Q3KQU3 841 aa13.21□□□□□ -0.3
RAD50-209ENST00000533482 CENPUQ71F23 418 aa13.21□□□□□ -0.3
RAD50-209ENST00000533482 KIF12Q96FN5 646 aa13.21□□□□□ -0.3
RAD50-209ENST00000533482 CCT8L2Q96SF2 557 aa13.21□□□□□ -0.3
RAD50-209ENST00000533482 PDCD2LQ9BRP1 358 aa13.21□□□□□ -0.3
RAD50-209ENST00000533482 EFCC1Q9HA90 598 aa13.21□□□□□ -0.3
RAD50-209ENST00000533482 SPAG7O75391 227 aa13.2□□□□□ -0.3
RAD50-209ENST00000533482 BAG2O95816 211 aa13.2□□□□□ -0.3
RAD50-209ENST00000533482 RASSF2P50749 326 aa13.2□□□□□ -0.3
RAD50-209ENST00000533482 SPDYE2Q495Y8 402 aa13.2□□□□□ -0.3
RAD50-209ENST00000533482 JAMLQ86YT9 394 aa13.2□□□□□ -0.3
RAD50-209ENST00000533482 IRF2BP1Q8IU81 584 aa13.2□□□□□ -0.3
RAD50-209ENST00000533482 CCDC117Q8IWD4 279 aaPredicted RBP13.2□□□□□ -0.3
RAD50-209ENST00000533482 SIX6OS1Q8N1H7 587 aa13.2□□□□□ -0.3
RAD50-209ENST00000533482 MDM1Q8TC05 714 aa13.2□□□□□ -0.3
RAD50-209ENST00000533482 HAS1Q92839 578 aa13.2□□□□□ -0.3
RAD50-209ENST00000533482 MTMR9Q96QG7 549 aa13.2□□□□□ -0.3
RAD50-209ENST00000533482 TLR10Q9BXR5 811 aa13.2□□□□□ -0.3
RAD50-209ENST00000533482 FAM187AA6NFU0 413 aa13.2□□□□□ -0.3
RAD50-209ENST00000533482 TISP43B9A030 160 aa13.2□□□□□ -0.3
RAD50-209ENST00000533482 ITGA4P13612 1032 aa13.2□□□□□ -0.3
RAD50-209ENST00000533482 LONRF1Q17RB8 773 aa13.2□□□□□ -0.3
RAD50-209ENST00000533482 FASTKD5Q7L8L6 764 aaKnown RBP13.2□□□□□ -0.3
RAD50-209ENST00000533482 SLC20A1Q8WUM9 679 aa13.2□□□□□ -0.3
RAD50-209ENST00000533482 SMYD2Q9NRG4 433 aa13.2□□□□□ -0.3
RAD50-209ENST00000533482 LTN1O94822 1766 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms