RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-215ENST00000533476 PTPRFP10586 1907 aa20.75■□□□□ 0.91
UBXN1-215ENST00000533476 PAPPA2Q9BXP8 1791 aa20.75■□□□□ 0.91
UBXN1-215ENST00000533476 ZNF233A6NK53 670 aa20.74■□□□□ 0.91
UBXN1-215ENST00000533476 A6NNZ2 444 aa20.74■□□□□ 0.91
UBXN1-215ENST00000533476 EXTL3O43909 919 aa20.74■□□□□ 0.91
UBXN1-215ENST00000533476 USP2O75604 605 aaPredicted RBP20.74■□□□□ 0.91
UBXN1-215ENST00000533476 MMEP08473 750 aa20.74■□□□□ 0.91
UBXN1-215ENST00000533476 DLATP10515 647 aaKnown RBP20.74■□□□□ 0.91
UBXN1-215ENST00000533476 ATP4AP20648 1035 aa20.74■□□□□ 0.91
UBXN1-215ENST00000533476 PTENP60484 403 aa20.74■□□□□ 0.91
UBXN1-215ENST00000533476 POU5F1Q01860 360 aaKnown RBP20.74■□□□□ 0.91
UBXN1-215ENST00000533476 GCNT1Q02742 428 aa20.74■□□□□ 0.91
UBXN1-215ENST00000533476 HLTFQ14527 1009 aaKnown RBP eCLIP20.74■□□□□ 0.91
UBXN1-215ENST00000533476 TUBB8Q3ZCM7 444 aa20.74■□□□□ 0.91
UBXN1-215ENST00000533476 C15orf39Q6ZRI6 1047 aa20.74■□□□□ 0.91
UBXN1-215ENST00000533476 CYFIP1Q7L576 1253 aa20.74■□□□□ 0.91
UBXN1-215ENST00000533476 UBL4BQ8N7F7 174 aa20.74■□□□□ 0.91
UBXN1-215ENST00000533476 MORC4Q8TE76 937 aa20.74■□□□□ 0.91
UBXN1-215ENST00000533476 PIK3R5Q8WYR1 880 aa20.74■□□□□ 0.91
UBXN1-215ENST00000533476 ALG3Q92685 438 aa20.74■□□□□ 0.91
UBXN1-215ENST00000533476 FAM81BQ96LP2 452 aa20.74■□□□□ 0.91
UBXN1-215ENST00000533476 AMACRQ9UHK6 382 aa20.74■□□□□ 0.91
UBXN1-215ENST00000533476 STYXL1Q9Y6J8 313 aa20.74■□□□□ 0.91
UBXN1-215ENST00000533476 FAM170AA1A519 330 aa20.74■□□□□ 0.91
UBXN1-215ENST00000533476 KIAA0391O15091 583 aaKnown RBP20.74■□□□□ 0.91
UBXN1-215ENST00000533476 PPFIA4O75335 1185 aa20.74■□□□□ 0.91
UBXN1-215ENST00000533476 CYP1A2P05177 515 aa20.74■□□□□ 0.91
UBXN1-215ENST00000533476 LIG4P49917 911 aa20.74■□□□□ 0.91
UBXN1-215ENST00000533476 CLDN10P78369 228 aa20.74■□□□□ 0.91
UBXN1-215ENST00000533476 IRX5P78411 483 aaPredicted RBP20.74■□□□□ 0.91
UBXN1-215ENST00000533476 LBX2Q6XYB7 198 aa20.74■□□□□ 0.91
UBXN1-215ENST00000533476 SRLQ86TD4 932 aa20.74■□□□□ 0.91
UBXN1-215ENST00000533476 ANKRD35Q8N283 1001 aa20.74■□□□□ 0.91
UBXN1-215ENST00000533476 ZNF526Q8TF50 670 aaPredicted RBP20.74■□□□□ 0.91
UBXN1-215ENST00000533476 DHX33Q9H6R0 707 aaKnown RBP20.74■□□□□ 0.91
UBXN1-215ENST00000533476 FBXO40Q9UH90 709 aa20.74■□□□□ 0.91
UBXN1-215ENST00000533476 DICER1Q9UPY3 1922 aaKnown RBP20.74■□□□□ 0.91
UBXN1-215ENST00000533476 GOLGA6L10A0A0M3HER8 536 aa20.73■□□□□ 0.91
UBXN1-215ENST00000533476 CNTN2Q02246 1040 aa20.73■□□□□ 0.91
UBXN1-215ENST00000533476 VGLL4Q14135 290 aa20.73■□□□□ 0.91
UBXN1-215ENST00000533476 PSMD6Q15008 389 aa20.73■□□□□ 0.91
UBXN1-215ENST00000533476 TTMPQ5BVD1 217 aa20.73■□□□□ 0.91
UBXN1-215ENST00000533476 DDX1Q92499 740 aaKnown RBP20.73■□□□□ 0.91
UBXN1-215ENST00000533476 ZSWIM1Q9BR11 485 aa20.73■□□□□ 0.91
UBXN1-215ENST00000533476 PORCNQ9H237 461 aa20.73■□□□□ 0.91
UBXN1-215ENST00000533476 ACP6Q9NPH0 428 aa20.73■□□□□ 0.91
UBXN1-215ENST00000533476 GTF3C4Q9UKN8 822 aa20.73■□□□□ 0.91
UBXN1-215ENST00000533476 IGKV6D-21A0A0A0MT36 114 aa20.72■□□□□ 0.91
UBXN1-215ENST00000533476 PIGRP01833 764 aa20.72■□□□□ 0.91
UBXN1-215ENST00000533476 ALDH5A1P51649 535 aaPredicted RBP20.72■□□□□ 0.91
UBXN1-215ENST00000533476 STRN3Q13033 797 aa20.72■□□□□ 0.91
UBXN1-215ENST00000533476 NIFKQ9BYG3 293 aaKnown RBP20.72■□□□□ 0.91
UBXN1-215ENST00000533476 ZNFX1Q9P2E3 1918 aaKnown RBP20.72■□□□□ 0.91
UBXN1-215ENST00000533476 TULP1O00294 542 aaPredicted RBP20.72■□□□□ 0.91
UBXN1-215ENST00000533476 TTI1O43156 1089 aa20.72■□□□□ 0.91
UBXN1-215ENST00000533476 HSPA6P17066 643 aa20.72■□□□□ 0.91
UBXN1-215ENST00000533476 NAMPTP43490 491 aa20.72■□□□□ 0.91
UBXN1-215ENST00000533476 SLC20A2Q08357 652 aa20.72■□□□□ 0.91
UBXN1-215ENST00000533476 FSTL1Q12841 308 aa20.72■□□□□ 0.91
UBXN1-215ENST00000533476 PRKG1Q13976 671 aa20.72■□□□□ 0.91
UBXN1-215ENST00000533476 TREML2Q5T2D2 321 aa20.72■□□□□ 0.91
UBXN1-215ENST00000533476 RIOX2Q8IUF8 465 aa20.72■□□□□ 0.91
UBXN1-215ENST00000533476 ASAP3Q8TDY4 903 aa20.72■□□□□ 0.91
UBXN1-215ENST00000533476 PSPC1Q8WXF1 523 aaKnown RBP20.72■□□□□ 0.91
UBXN1-215ENST00000533476 TATDN2Q93075 761 aa20.72■□□□□ 0.91
UBXN1-215ENST00000533476 ARL8AQ96BM9 186 aa20.72■□□□□ 0.91
UBXN1-215ENST00000533476 LRRC45Q96CN5 670 aa20.72■□□□□ 0.91
UBXN1-215ENST00000533476 FAM114A2Q9NRY5 505 aa20.72■□□□□ 0.91
UBXN1-215ENST00000533476 C1orf112Q9NSG2 853 aa20.72■□□□□ 0.91
UBXN1-215ENST00000533476 UVRAGQ9P2Y5 699 aa20.72■□□□□ 0.91
UBXN1-215ENST00000533476 OTOFQ9HC10 1997 aa20.71■□□□□ 0.91
UBXN1-215ENST00000533476 ARL2P36404 184 aa20.71■□□□□ 0.91
UBXN1-215ENST00000533476 ZNF211Q13398 564 aaPredicted RBP20.71■□□□□ 0.91
UBXN1-215ENST00000533476 DDX42Q86XP3 938 aaKnown RBP eCLIP20.71■□□□□ 0.91
UBXN1-215ENST00000533476 C1orf131Q8NDD1 294 aaKnown RBP20.71■□□□□ 0.91
UBXN1-215ENST00000533476 ZNF564Q8TBZ8 553 aaPredicted RBP20.71■□□□□ 0.91
UBXN1-215ENST00000533476 DHX38Q92620 1227 aaKnown RBP20.71■□□□□ 0.91
UBXN1-215ENST00000533476 TMEM143Q96AN5 459 aa20.71■□□□□ 0.91
UBXN1-215ENST00000533476 ZNF653Q96CK0 615 aa20.71■□□□□ 0.91
UBXN1-215ENST00000533476 CEP89Q96ST8 783 aa20.71■□□□□ 0.91
UBXN1-215ENST00000533476 NUP85Q9BW27 656 aa20.71■□□□□ 0.91
UBXN1-215ENST00000533476 WNT8AQ9H1J5 351 aa20.71■□□□□ 0.91
UBXN1-215ENST00000533476 UTP11Q9Y3A2 253 aaKnown RBP20.71■□□□□ 0.91
UBXN1-215ENST00000533476 RRP15Q9Y3B9 282 aaKnown RBP20.71■□□□□ 0.91
UBXN1-215ENST00000533476 NR2E1Q9Y466 385 aa20.71■□□□□ 0.91
UBXN1-215ENST00000533476 ATMINO43313 823 aaPredicted RBP20.7■□□□□ 0.91
UBXN1-215ENST00000533476 COMTP21964 271 aa20.7■□□□□ 0.91
UBXN1-215ENST00000533476 UBA1P22314 1058 aaKnown RBP20.7■□□□□ 0.91
UBXN1-215ENST00000533476 GLRA2P23416 452 aa20.7■□□□□ 0.91
UBXN1-215ENST00000533476 EDNRBP24530 442 aa20.7■□□□□ 0.91
UBXN1-215ENST00000533476 LRIG3Q6UXM1 1119 aa20.7■□□□□ 0.91
UBXN1-215ENST00000533476 SEPT14Q6ZU15 432 aa20.7■□□□□ 0.91
UBXN1-215ENST00000533476 ZNF516Q92618 1163 aa20.7■□□□□ 0.91
UBXN1-215ENST00000533476 KRT35Q92764 455 aa20.7■□□□□ 0.91
UBXN1-215ENST00000533476 CD101Q93033 1021 aa20.7■□□□□ 0.91
UBXN1-215ENST00000533476 RAB17Q9H0T7 212 aa20.7■□□□□ 0.91
UBXN1-215ENST00000533476 NEUROG2Q9H2A3 272 aa20.7■□□□□ 0.91
UBXN1-215ENST00000533476 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.7■□□□□ 0.91
UBXN1-215ENST00000533476 BTBD7Q9P203 1132 aa20.7■□□□□ 0.91
UBXN1-215ENST00000533476 AGO2Q9UKV8 859 aaKnown RBP20.7■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms