RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 COLEC11Q9BWP8 271 aa12.48□□□□□ -0.41
CLCF1-202ENST00000533438 RAB34Q9BZG1 259 aa12.48□□□□□ -0.41
CLCF1-202ENST00000533438 GPR62Q9BZJ7 368 aa12.48□□□□□ -0.41
CLCF1-202ENST00000533438 RXFP1Q9HBX9 757 aa12.48□□□□□ -0.41
CLCF1-202ENST00000533438 DDX19AQ9NUU7 478 aaKnown RBP12.48□□□□□ -0.41
CLCF1-202ENST00000533438 KLK14Q9P0G3 267 aa12.48□□□□□ -0.41
CLCF1-202ENST00000533438 ADAM28Q9UKQ2 775 aa12.48□□□□□ -0.41
CLCF1-202ENST00000533438 KIAA1024Q9UPX6 916 aa12.48□□□□□ -0.41
CLCF1-202ENST00000533438 USTQ9Y2C2 406 aa12.48□□□□□ -0.41
CLCF1-202ENST00000533438 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.48□□□□□ -0.41
CLCF1-202ENST00000533438 MYH11P35749 1972 aa12.48□□□□□ -0.41
CLCF1-202ENST00000533438 VWA8A3KMH1 1905 aa12.48□□□□□ -0.41
CLCF1-202ENST00000533438 E9PMD0 336 aa12.47□□□□□ -0.41
CLCF1-202ENST00000533438 C2CD2LO14523 706 aa12.47□□□□□ -0.41
CLCF1-202ENST00000533438 PTGESO14684 152 aa12.47□□□□□ -0.41
CLCF1-202ENST00000533438 HSP90AA1P07900 732 aaKnown RBP12.47□□□□□ -0.41
CLCF1-202ENST00000533438 AVPR2P30518 371 aa12.47□□□□□ -0.41
CLCF1-202ENST00000533438 FOXK2Q01167 660 aa12.47□□□□□ -0.41
CLCF1-202ENST00000533438 NAB2Q15742 525 aa12.47□□□□□ -0.41
CLCF1-202ENST00000533438 FUT10Q6P4F1 479 aa12.47□□□□□ -0.41
CLCF1-202ENST00000533438 C15orf39Q6ZRI6 1047 aa12.47□□□□□ -0.41
CLCF1-202ENST00000533438 GPR65Q8IYL9 337 aa12.47□□□□□ -0.41
CLCF1-202ENST00000533438 ZDHHC14Q8IZN3 488 aa12.47□□□□□ -0.41
CLCF1-202ENST00000533438 DEPTORQ8TB45 409 aa12.47□□□□□ -0.41
CLCF1-202ENST00000533438 KIFAP3Q92845 792 aa12.47□□□□□ -0.41
CLCF1-202ENST00000533438 IFT74Q96LB3 600 aa12.47□□□□□ -0.41
CLCF1-202ENST00000533438 PAAF1Q9BRP4 392 aa12.47□□□□□ -0.41
CLCF1-202ENST00000533438 ADPGKQ9BRR6 497 aa12.47□□□□□ -0.41
CLCF1-202ENST00000533438 MMTAG2Q9BU76 263 aaKnown RBP12.47□□□□□ -0.41
CLCF1-202ENST00000533438 KIFC3Q9BVG8 833 aa12.47□□□□□ -0.41
CLCF1-202ENST00000533438 POLD4Q9HCU8 107 aa12.47□□□□□ -0.41
CLCF1-202ENST00000533438 SNTG2Q9NY99 539 aa12.47□□□□□ -0.41
CLCF1-202ENST00000533438 CACNG4Q9UBN1 327 aa12.47□□□□□ -0.41
CLCF1-202ENST00000533438 USP20Q9Y2K6 914 aa12.47□□□□□ -0.41
CLCF1-202ENST00000533438 KIF3AQ9Y496 699 aa12.47□□□□□ -0.41
CLCF1-202ENST00000533438 WDR87Q6ZQQ6 2873 aa12.47□□□□□ -0.41
CLCF1-202ENST00000533438 DMDP11532 3685 aa12.47□□□□□ -0.41
CLCF1-202ENST00000533438 PP2D1A8MPX8 630 aa12.46□□□□□ -0.41
CLCF1-202ENST00000533438 RECQL4O94761 1208 aa12.46□□□□□ -0.41
CLCF1-202ENST00000533438 PAPLNO95428 1278 aa12.46□□□□□ -0.41
CLCF1-202ENST00000533438 C1RP00736 705 aa12.46□□□□□ -0.41
CLCF1-202ENST00000533438 ADH1AP07327 375 aa12.46□□□□□ -0.41
CLCF1-202ENST00000533438 CDC25AP30304 524 aa12.46□□□□□ -0.41
CLCF1-202ENST00000533438 EFNA5P52803 228 aa12.46□□□□□ -0.41
CLCF1-202ENST00000533438 TUSC3Q13454 348 aa12.46□□□□□ -0.41
CLCF1-202ENST00000533438 HSP90AA2PQ14568 343 aaPredicted RBP12.46□□□□□ -0.41
CLCF1-202ENST00000533438 USP41Q3LFD5 358 aa12.46□□□□□ -0.41
CLCF1-202ENST00000533438 RILPL1Q5EBL4 403 aa12.46□□□□□ -0.41
CLCF1-202ENST00000533438 HYIQ5T013 277 aa12.46□□□□□ -0.41
CLCF1-202ENST00000533438 NT5DC1Q5TFE4 455 aa12.46□□□□□ -0.41
CLCF1-202ENST00000533438 KRT79Q5XKE5 535 aa12.46□□□□□ -0.41
CLCF1-202ENST00000533438 EEF1DP3Q658K8 133 aa12.46□□□□□ -0.41
CLCF1-202ENST00000533438 SUGP1Q8IWZ8 645 aaKnown RBP12.46□□□□□ -0.41
CLCF1-202ENST00000533438 DAW1Q8N136 415 aa12.46□□□□□ -0.41
CLCF1-202ENST00000533438 PLCD3Q8N3E9 789 aa12.46□□□□□ -0.41
CLCF1-202ENST00000533438 CMASQ8NFW8 434 aaPredicted RBP12.46□□□□□ -0.41
CLCF1-202ENST00000533438 RABGGTAQ92696 567 aa12.46□□□□□ -0.41
CLCF1-202ENST00000533438 B3GALT6Q96L58 329 aa12.46□□□□□ -0.41
CLCF1-202ENST00000533438 RHOBTB2Q9BYZ6 727 aa12.46□□□□□ -0.41
CLCF1-202ENST00000533438 CXCL16Q9H2A7 254 aa12.46□□□□□ -0.41
CLCF1-202ENST00000533438 MAN1C1Q9NR34 630 aa12.46□□□□□ -0.41
CLCF1-202ENST00000533438 FNIP2Q9P278 1114 aa12.46□□□□□ -0.41
CLCF1-202ENST00000533438 SORCS3Q9UPU3 1222 aa12.46□□□□□ -0.41
CLCF1-202ENST00000533438 CITO14578 2027 aa12.45□□□□□ -0.42
CLCF1-202ENST00000533438 PDCD11Q14690 1871 aaKnown RBP12.45□□□□□ -0.42
CLCF1-202ENST00000533438 BRD1O95696 1058 aa12.45□□□□□ -0.42
CLCF1-202ENST00000533438 GLUD1P00367 558 aa12.45□□□□□ -0.42
CLCF1-202ENST00000533438 THP07101 528 aa12.45□□□□□ -0.42
CLCF1-202ENST00000533438 GJB2P29033 226 aa12.45□□□□□ -0.42
CLCF1-202ENST00000533438 ATP2C1P98194 919 aaPredicted RBP12.45□□□□□ -0.42
CLCF1-202ENST00000533438 MAPK7Q13164 816 aa12.45□□□□□ -0.42
CLCF1-202ENST00000533438 MTMR3Q13615 1198 aa12.45□□□□□ -0.42
CLCF1-202ENST00000533438 DCAF4L1Q3SXM0 396 aa12.45□□□□□ -0.42
CLCF1-202ENST00000533438 ATF7IP2Q5U623 682 aa12.45□□□□□ -0.42
CLCF1-202ENST00000533438 RINT1Q6NUQ1 792 aa12.45□□□□□ -0.42
CLCF1-202ENST00000533438 DTHD1Q6ZMT9 781 aa12.45□□□□□ -0.42
CLCF1-202ENST00000533438 KCNK18Q7Z418 384 aa12.45□□□□□ -0.42
CLCF1-202ENST00000533438 TDRD5Q8NAT2 981 aaKnown RBP12.45□□□□□ -0.42
CLCF1-202ENST00000533438 KREMEN2Q8NCW0 462 aa12.45□□□□□ -0.42
CLCF1-202ENST00000533438 HDAC7Q8WUI4 952 aa12.45□□□□□ -0.42
CLCF1-202ENST00000533438 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.45□□□□□ -0.42
CLCF1-202ENST00000533438 DPP7Q9UHL4 492 aa12.45□□□□□ -0.42
CLCF1-202ENST00000533438 DNM3Q9UQ16 869 aa12.45□□□□□ -0.42
CLCF1-202ENST00000533438 SMC3Q9UQE7 1217 aa12.45□□□□□ -0.42
CLCF1-202ENST00000533438 DOCK8Q8NF50 2099 aa12.44□□□□□ -0.42
CLCF1-202ENST00000533438 SF3B1O75533 1304 aaKnown RBP eCLIP12.44□□□□□ -0.42
CLCF1-202ENST00000533438 PHLPP2Q6ZVD8 1323 aa12.44□□□□□ -0.42
CLCF1-202ENST00000533438 CASTOR2A6NHX0 329 aa12.44□□□□□ -0.42
CLCF1-202ENST00000533438 SPDYE4A6NLX3 237 aa12.44□□□□□ -0.42
CLCF1-202ENST00000533438 K7ERI5 159 aa12.44□□□□□ -0.42
CLCF1-202ENST00000533438 HIP1RO75146 1068 aa12.44□□□□□ -0.42
CLCF1-202ENST00000533438 KIF4AO95239 1232 aa12.44□□□□□ -0.42
CLCF1-202ENST00000533438 LIG1P18858 919 aa12.44□□□□□ -0.42
CLCF1-202ENST00000533438 NPTX2P47972 431 aa12.44□□□□□ -0.42
CLCF1-202ENST00000533438 PEX3P56589 373 aa12.44□□□□□ -0.42
CLCF1-202ENST00000533438 TMEM132AQ24JP5 1023 aa12.44□□□□□ -0.42
CLCF1-202ENST00000533438 MCTP1Q6DN14 999 aa12.44□□□□□ -0.42
CLCF1-202ENST00000533438 LILRA6Q6PI73 481 aa12.44□□□□□ -0.42
CLCF1-202ENST00000533438 CYP26C1Q6V0L0 522 aa12.44□□□□□ -0.42
CLCF1-202ENST00000533438 CCDC149Q6ZUS6 474 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms