RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 BRWD1Q9NSI6 2320 aa10.8□□□□□ -0.68
NUP98-220ENST00000533346 A0A087X0B3 334 aa10.79□□□□□ -0.68
NUP98-220ENST00000533346 NPHP3-ACAD11A0A0J9YXS1 232 aa10.79□□□□□ -0.68
NUP98-220ENST00000533346 GRXCR2A6NFK2 248 aa10.79□□□□□ -0.68
NUP98-220ENST00000533346 C2orf71A6NGG8 1288 aa10.79□□□□□ -0.68
NUP98-220ENST00000533346 TMEM189-UBE2V1I3L0A0 370 aa10.79□□□□□ -0.68
NUP98-220ENST00000533346 NR1I2O75469 434 aa10.79□□□□□ -0.68
NUP98-220ENST00000533346 RECQL4O94761 1208 aa10.79□□□□□ -0.68
NUP98-220ENST00000533346 FAM13AO94988 1023 aa10.79□□□□□ -0.68
NUP98-220ENST00000533346 PAPLNO95428 1278 aa10.79□□□□□ -0.68
NUP98-220ENST00000533346 POMCP01189 267 aa10.79□□□□□ -0.68
NUP98-220ENST00000533346 SOD2P04179 222 aa10.79□□□□□ -0.68
NUP98-220ENST00000533346 SSBP05455 408 aaKnown RBP eCLIP10.79□□□□□ -0.68
NUP98-220ENST00000533346 THP07101 528 aa10.79□□□□□ -0.68
NUP98-220ENST00000533346 KCNE1P15382 129 aa10.79□□□□□ -0.68
NUP98-220ENST00000533346 GAP43P17677 238 aa10.79□□□□□ -0.68
NUP98-220ENST00000533346 IBSPP21815 317 aaPredicted RBP10.79□□□□□ -0.68
NUP98-220ENST00000533346 AKAP5P24588 427 aa10.79□□□□□ -0.68
NUP98-220ENST00000533346 SCNN1GP51170 649 aa10.79□□□□□ -0.68
NUP98-220ENST00000533346 TUSC3Q13454 348 aa10.79□□□□□ -0.68
NUP98-220ENST00000533346 BECN1Q14457 450 aa10.79□□□□□ -0.68
NUP98-220ENST00000533346 SKIV2LQ15477 1246 aaKnown RBP10.79□□□□□ -0.68
NUP98-220ENST00000533346 LONRF3Q496Y0 759 aa10.79□□□□□ -0.68
NUP98-220ENST00000533346 SHC4Q6S5L8 630 aa10.79□□□□□ -0.68
NUP98-220ENST00000533346 ZNF720Q7Z2F6 126 aa10.79□□□□□ -0.68
NUP98-220ENST00000533346 MAP4K3Q8IVH8 894 aa10.79□□□□□ -0.68
NUP98-220ENST00000533346 DDX12PQ92771 950 aa10.79□□□□□ -0.68
NUP98-220ENST00000533346 ZFP42Q96MM3 310 aa10.79□□□□□ -0.68
NUP98-220ENST00000533346 PPP1R10Q96QC0 940 aaKnown RBP10.79□□□□□ -0.68
NUP98-220ENST00000533346 TCF25Q9BQ70 676 aa10.79□□□□□ -0.68
NUP98-220ENST00000533346 PYM1Q9BRP8 204 aaKnown RBP10.79□□□□□ -0.68
NUP98-220ENST00000533346 TARS2Q9BW92 718 aaKnown RBP10.79□□□□□ -0.68
NUP98-220ENST00000533346 COLEC11Q9BWP8 271 aa10.79□□□□□ -0.68
NUP98-220ENST00000533346 VN1R3Q9BXE9 311 aa10.79□□□□□ -0.68
NUP98-220ENST00000533346 TLE6Q9H808 572 aa10.79□□□□□ -0.68
NUP98-220ENST00000533346 MAGEF1Q9HAY2 307 aa10.79□□□□□ -0.68
NUP98-220ENST00000533346 PARP2Q9UGN5 583 aa10.79□□□□□ -0.68
NUP98-220ENST00000533346 TBX20Q9UMR3 447 aa10.79□□□□□ -0.68
NUP98-220ENST00000533346 PCDHA7Q9UN72 937 aa10.79□□□□□ -0.68
NUP98-220ENST00000533346 ATP6V1DQ9Y5K8 247 aa10.79□□□□□ -0.68
NUP98-220ENST00000533346 STYXL1Q9Y6J8 313 aa10.79□□□□□ -0.68
NUP98-220ENST00000533346 BDP1A6H8Y1 2624 aa10.78□□□□□ -0.68
NUP98-220ENST00000533346 FAM237AA0A1B0GTK4 181 aa10.78□□□□□ -0.68
NUP98-220ENST00000533346 MYMKA6NI61 221 aa10.78□□□□□ -0.68
NUP98-220ENST00000533346 NT5C1B-RDH14C9J2C7 533 aa10.78□□□□□ -0.68
NUP98-220ENST00000533346 GLP2RO95838 553 aa10.78□□□□□ -0.68
NUP98-220ENST00000533346 PBX3P40426 434 aa10.78□□□□□ -0.68
NUP98-220ENST00000533346 STAT6P42226 847 aa10.78□□□□□ -0.68
NUP98-220ENST00000533346 TFF2Q03403 129 aa10.78□□□□□ -0.68
NUP98-220ENST00000533346 DNM1Q05193 864 aaKnown RBP10.78□□□□□ -0.68
NUP98-220ENST00000533346 ALCAMQ13740 583 aa10.78□□□□□ -0.68
NUP98-220ENST00000533346 RESP18Q5W5W9 173 aa10.78□□□□□ -0.68
NUP98-220ENST00000533346 ADALQ6DHV7 355 aa10.78□□□□□ -0.68
NUP98-220ENST00000533346 TMC7Q7Z402 723 aa10.78□□□□□ -0.68
NUP98-220ENST00000533346 FAM178BQ8IXR5 827 aa10.78□□□□□ -0.68
NUP98-220ENST00000533346 VPS52Q8N1B4 723 aa10.78□□□□□ -0.68
NUP98-220ENST00000533346 MYCT1Q8N699 235 aa10.78□□□□□ -0.68
NUP98-220ENST00000533346 IQUBQ8NA54 791 aa10.78□□□□□ -0.68
NUP98-220ENST00000533346 RASSF8Q8NHQ8 419 aa10.78□□□□□ -0.68
NUP98-220ENST00000533346 MICAL1Q8TDZ2 1067 aa10.78□□□□□ -0.68
NUP98-220ENST00000533346 BCL7CQ8WUZ0 217 aaPredicted RBP10.78□□□□□ -0.68
NUP98-220ENST00000533346 UROC1Q96N76 676 aa10.78□□□□□ -0.68
NUP98-220ENST00000533346 RPS6KC1Q96S38 1066 aa10.78□□□□□ -0.68
NUP98-220ENST00000533346 HERC2P3Q9BVR0 1158 aa10.78□□□□□ -0.68
NUP98-220ENST00000533346 CCDC94Q9BW85 323 aaPredicted RBP10.78□□□□□ -0.68
NUP98-220ENST00000533346 PLEKHA5Q9HAU0 1116 aa10.78□□□□□ -0.68
NUP98-220ENST00000533346 RXFP1Q9HBX9 757 aa10.78□□□□□ -0.68
NUP98-220ENST00000533346 TOPORSQ9NS56 1045 aaPredicted RBP10.78□□□□□ -0.68
NUP98-220ENST00000533346 CLDND1Q9NY35 253 aa10.78□□□□□ -0.68
NUP98-220ENST00000533346 CLEC1BQ9P126 229 aa10.78□□□□□ -0.68
NUP98-220ENST00000533346 CNTN3Q9P232 1028 aa10.78□□□□□ -0.68
NUP98-220ENST00000533346 PRKAG3Q9UGI9 489 aa10.78□□□□□ -0.68
NUP98-220ENST00000533346 FAM50BQ9Y247 325 aa10.78□□□□□ -0.68
NUP98-220ENST00000533346 USP20Q9Y2K6 914 aa10.78□□□□□ -0.68
NUP98-220ENST00000533346 ANK1P16157 1881 aa10.78□□□□□ -0.68
NUP98-220ENST00000533346 HIDE1A8MVS5 230 aa10.77□□□□□ -0.69
NUP98-220ENST00000533346 CLDN3O15551 220 aa10.77□□□□□ -0.69
NUP98-220ENST00000533346 FAM189A1O60320 539 aa10.77□□□□□ -0.69
NUP98-220ENST00000533346 TBX10O75333 385 aa10.77□□□□□ -0.69
NUP98-220ENST00000533346 TBCAO75347 108 aaKnown RBP10.77□□□□□ -0.69
NUP98-220ENST00000533346 CXCL14O95715 111 aa10.77□□□□□ -0.69
NUP98-220ENST00000533346 KRT18P05783 430 aaKnown RBP10.77□□□□□ -0.69
NUP98-220ENST00000533346 HOXB8P17481 243 aaPredicted RBP10.77□□□□□ -0.69
NUP98-220ENST00000533346 KCNA5P22460 613 aa10.77□□□□□ -0.69
NUP98-220ENST00000533346 PLA2G5P39877 138 aa10.77□□□□□ -0.69
NUP98-220ENST00000533346 NRIP1P48552 1158 aa10.77□□□□□ -0.69
NUP98-220ENST00000533346 YARSP54577 528 aaKnown RBP10.77□□□□□ -0.69
NUP98-220ENST00000533346 AMPD3Q01432 767 aa10.77□□□□□ -0.69
NUP98-220ENST00000533346 DSG1Q02413 1049 aa10.77□□□□□ -0.69
NUP98-220ENST00000533346 CACNB1Q02641 598 aaPredicted RBP10.77□□□□□ -0.69
NUP98-220ENST00000533346 DLX2Q07687 328 aaPredicted RBP10.77□□□□□ -0.69
NUP98-220ENST00000533346 RAD51AP2Q09MP3 1159 aa10.77□□□□□ -0.69
NUP98-220ENST00000533346 NOLC1Q14978 699 aaKnown RBP eCLIP10.77□□□□□ -0.69
NUP98-220ENST00000533346 PTPN14Q15678 1187 aa10.77□□□□□ -0.69
NUP98-220ENST00000533346 ZNF568Q3ZCX4 644 aa10.77□□□□□ -0.69
NUP98-220ENST00000533346 KIAA0319Q5VV43 1072 aa10.77□□□□□ -0.69
NUP98-220ENST00000533346 PPFIBP1Q86W92 1011 aa10.77□□□□□ -0.69
NUP98-220ENST00000533346 SLC22A17Q8WUG5 538 aa10.77□□□□□ -0.69
NUP98-220ENST00000533346 ACAP3Q96P50 834 aa10.77□□□□□ -0.69
NUP98-220ENST00000533346 C7orf25Q9BPX7 421 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms