RNA–Protein interactions for RNA: ENST00000533162.1

PUF60-221, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-221ENST00000533162 VPS52Q8N1B4 723 aa16.3■□□□□ 0.2
PUF60-221ENST00000533162 DHX58Q96C10 678 aa16.3■□□□□ 0.2
PUF60-221ENST00000533162 HVCN1Q96D96 273 aa16.3■□□□□ 0.2
PUF60-221ENST00000533162 ST6GALNAC4Q9H4F1 302 aa16.3■□□□□ 0.2
PUF60-221ENST00000533162 MRPL44Q9H9J2 332 aaKnown RBP16.3■□□□□ 0.2
PUF60-221ENST00000533162 PTPRHQ9HD43 1115 aa16.3■□□□□ 0.2
PUF60-221ENST00000533162 SLC38A7Q9NVC3 462 aa16.3■□□□□ 0.2
PUF60-221ENST00000533162 ANKFY1Q9P2R3 1169 aa16.3■□□□□ 0.2
PUF60-221ENST00000533162 USP20Q9Y2K6 914 aa16.3■□□□□ 0.2
PUF60-221ENST00000533162 PCDHB13Q9Y5F0 798 aa16.3■□□□□ 0.2
PUF60-221ENST00000533162 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.3■□□□□ 0.2
PUF60-221ENST00000533162 FNDC1Q4ZHG4 1894 aaPredicted RBP16.3■□□□□ 0.2
PUF60-221ENST00000533162 NLRC5Q86WI3 1866 aa16.29■□□□□ 0.2
PUF60-221ENST00000533162 MYMKA6NI61 221 aa16.29■□□□□ 0.2
PUF60-221ENST00000533162 POLR2DO15514 142 aaKnown RBP16.29■□□□□ 0.2
PUF60-221ENST00000533162 TADA2AO75478 443 aa16.29■□□□□ 0.2
PUF60-221ENST00000533162 HARSP12081 509 aaKnown RBP16.29■□□□□ 0.2
PUF60-221ENST00000533162 KCNA5P22460 613 aa16.29■□□□□ 0.2
PUF60-221ENST00000533162 PROZP22891 400 aa16.29■□□□□ 0.2
PUF60-221ENST00000533162 IRS1P35568 1242 aa16.29■□□□□ 0.2
PUF60-221ENST00000533162 NDUFV1P49821 464 aa16.29■□□□□ 0.2
PUF60-221ENST00000533162 AFF1P51825 1210 aaKnown RBP16.29■□□□□ 0.2
PUF60-221ENST00000533162 ERVFC1P60507 584 aa16.29■□□□□ 0.2
PUF60-221ENST00000533162 GTF2BQ00403 316 aa16.29■□□□□ 0.2
PUF60-221ENST00000533162 DSC1Q08554 894 aa16.29■□□□□ 0.2
PUF60-221ENST00000533162 HYAL1Q12794 435 aa16.29■□□□□ 0.2
PUF60-221ENST00000533162 TUSC3Q13454 348 aa16.29■□□□□ 0.2
PUF60-221ENST00000533162 SLFN12LQ6IEE8 588 aa16.29■□□□□ 0.2
PUF60-221ENST00000533162 SHC4Q6S5L8 630 aa16.29■□□□□ 0.2
PUF60-221ENST00000533162 TAS1R3Q7RTX0 852 aa16.29■□□□□ 0.2
PUF60-221ENST00000533162 RBM23Q86U06 439 aaKnown RBP16.29■□□□□ 0.2
PUF60-221ENST00000533162 EFHBQ8N7U6 833 aa16.29■□□□□ 0.2
PUF60-221ENST00000533162 MRPL43Q8N983 215 aaKnown RBP16.29■□□□□ 0.2
PUF60-221ENST00000533162 LRRC15Q8TF66 581 aa16.29■□□□□ 0.2
PUF60-221ENST00000533162 CCDC34Q96HJ3 373 aa16.29■□□□□ 0.2
PUF60-221ENST00000533162 UROC1Q96N76 676 aa16.29■□□□□ 0.2
PUF60-221ENST00000533162 EMILIN2Q9BXX0 1053 aa16.29■□□□□ 0.2
PUF60-221ENST00000533162 CDT1Q9H211 546 aa16.29■□□□□ 0.2
PUF60-221ENST00000533162 PANK4Q9NVE7 773 aa16.29■□□□□ 0.2
PUF60-221ENST00000533162 MIOSQ9NXC5 875 aa16.29■□□□□ 0.2
PUF60-221ENST00000533162 USP25Q9UHP3 1055 aa16.29■□□□□ 0.2
PUF60-221ENST00000533162 PRG3Q9Y2Y8 225 aaPredicted RBP16.29■□□□□ 0.2
PUF60-221ENST00000533162 EDN1P05305 212 aa16.28■□□□□ 0.2
PUF60-221ENST00000533162 CTSAP10619 480 aa16.28■□□□□ 0.2
PUF60-221ENST00000533162 MCL1Q07820 350 aa16.28■□□□□ 0.2
PUF60-221ENST00000533162 LEXMQ3ZCV2 418 aa16.28■□□□□ 0.2
PUF60-221ENST00000533162 AXDND1Q5T1B0 1012 aaPredicted RBP16.28■□□□□ 0.2
PUF60-221ENST00000533162 RESP18Q5W5W9 173 aa16.28■□□□□ 0.2
PUF60-221ENST00000533162 ADALQ6DHV7 355 aa16.28■□□□□ 0.2
PUF60-221ENST00000533162 KIAA1841Q6NSI8 718 aa16.28■□□□□ 0.2
PUF60-221ENST00000533162 ZNF720Q7Z2F6 126 aa16.28■□□□□ 0.2
PUF60-221ENST00000533162 PPFIBP1Q86W92 1011 aa16.28■□□□□ 0.2
PUF60-221ENST00000533162 LEO1Q8WVC0 666 aaPredicted RBP16.28■□□□□ 0.2
PUF60-221ENST00000533162 PLEKHA5Q9HAU0 1116 aa16.28■□□□□ 0.2
PUF60-221ENST00000533162 MRPL17Q9NRX2 175 aaKnown RBP16.28■□□□□ 0.2
PUF60-221ENST00000533162 KCNH3Q9ULD8 1083 aa16.28■□□□□ 0.2
PUF60-221ENST00000533162 PIGRP01833 764 aa16.27■□□□□ 0.2
PUF60-221ENST00000533162 CMA1P23946 247 aa16.27■□□□□ 0.2
PUF60-221ENST00000533162 NMT1P30419 496 aaKnown RBP16.27■□□□□ 0.2
PUF60-221ENST00000533162 OSTNP61366 133 aa16.27■□□□□ 0.2
PUF60-221ENST00000533162 ELAVL2Q12926 359 aaKnown RBP16.27■□□□□ 0.2
PUF60-221ENST00000533162 ADAM15Q13444 863 aa16.27■□□□□ 0.2
PUF60-221ENST00000533162 HSP90AA2PQ14568 343 aaPredicted RBP16.27■□□□□ 0.2
PUF60-221ENST00000533162 COL19A1Q14993 1142 aa16.27■□□□□ 0.2
PUF60-221ENST00000533162 POSTNQ15063 836 aa16.27■□□□□ 0.2
PUF60-221ENST00000533162 DUSP6Q16828 381 aa16.27■□□□□ 0.2
PUF60-221ENST00000533162 CTC1Q2NKJ3 1217 aa16.27■□□□□ 0.2
PUF60-221ENST00000533162 ELMSAN1Q6PJG2 1045 aa16.27■□□□□ 0.2
PUF60-221ENST00000533162 SFR1Q86XK3 245 aa16.27■□□□□ 0.2
PUF60-221ENST00000533162 MAP4K3Q8IVH8 894 aa16.27■□□□□ 0.2
PUF60-221ENST00000533162 GSTCDQ8NEC7 633 aa16.27■□□□□ 0.2
PUF60-221ENST00000533162 DNAJC19Q96DA6 116 aa16.27■□□□□ 0.2
PUF60-221ENST00000533162 DDX27Q96GQ7 796 aaKnown RBP16.27■□□□□ 0.2
PUF60-221ENST00000533162 ACCSQ96QU6 501 aa16.27■□□□□ 0.2
PUF60-221ENST00000533162 TSPAN18Q96SJ8 248 aa16.27■□□□□ 0.2
PUF60-221ENST00000533162 ZBP1Q9H171 429 aa16.27■□□□□ 0.2
PUF60-221ENST00000533162 OLFML3Q9NRN5 406 aa16.27■□□□□ 0.2
PUF60-221ENST00000533162 KBTBD4Q9NVX7 518 aa16.27■□□□□ 0.2
PUF60-221ENST00000533162 ADAM28Q9UKQ2 775 aa16.27■□□□□ 0.2
PUF60-221ENST00000533162 ZDHHC9Q9Y397 364 aa16.27■□□□□ 0.2
PUF60-221ENST00000533162 PRRC2BQ5JSZ5 2229 aaKnown RBP16.26■□□□□ 0.19
PUF60-221ENST00000533162 SF3B1O75533 1304 aaKnown RBP eCLIP16.26■□□□□ 0.198e-14■■■■■ 114.9
PUF60-221ENST00000533162 A0A087X0B3 334 aa16.26■□□□□ 0.19
PUF60-221ENST00000533162 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.26■□□□□ 0.19
PUF60-221ENST00000533162 GOLGA6L4A6NEF3 574 aa16.26■□□□□ 0.19
PUF60-221ENST00000533162 C2orf71A6NGG8 1288 aa16.26■□□□□ 0.19
PUF60-221ENST00000533162 XPOTO43592 962 aaKnown RBP16.26■□□□□ 0.19
PUF60-221ENST00000533162 TRAPPC3O43617 180 aa16.26■□□□□ 0.19
PUF60-221ENST00000533162 GCNT3O95395 438 aa16.26■□□□□ 0.19
PUF60-221ENST00000533162 SOD2P04179 222 aa16.26■□□□□ 0.19
PUF60-221ENST00000533162 URODP06132 367 aa16.26■□□□□ 0.19
PUF60-221ENST00000533162 CLTAP09496 248 aa16.26■□□□□ 0.19
PUF60-221ENST00000533162 ASIC1P78348 528 aa16.26■□□□□ 0.19
PUF60-221ENST00000533162 CREMQ03060 361 aa16.26■□□□□ 0.19
PUF60-221ENST00000533162 TFF2Q03403 129 aa16.26■□□□□ 0.19
PUF60-221ENST00000533162 SYCP3Q8IZU3 236 aa16.26■□□□□ 0.19
PUF60-221ENST00000533162 MSTO1Q9BUK6 570 aa16.26■□□□□ 0.19
PUF60-221ENST00000533162 TMEM206Q9H813 350 aa16.26■□□□□ 0.19
PUF60-221ENST00000533162 DPP7Q9UHL4 492 aa16.26■□□□□ 0.19
PUF60-221ENST00000533162 IRAK3Q9Y616 596 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms