RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 HERC2P3Q9BVR0 1158 aa33.27■■■□□ 2.92
SSSCA1-207ENST00000533115 TARS2Q9BW92 718 aaKnown RBP33.27■■■□□ 2.92
SSSCA1-207ENST00000533115 S1PR5Q9H228 398 aa33.27■■■□□ 2.92
SSSCA1-207ENST00000533115 PTPRHQ9HD43 1115 aa33.27■■■□□ 2.92
SSSCA1-207ENST00000533115 ODF2LQ9ULJ1 636 aa33.27■■■□□ 2.92
SSSCA1-207ENST00000533115 THP07101 528 aa33.26■■■□□ 2.91
SSSCA1-207ENST00000533115 HOXB8P17481 243 aaPredicted RBP33.26■■■□□ 2.91
SSSCA1-207ENST00000533115 TUSC3Q13454 348 aa33.26■■■□□ 2.91
SSSCA1-207ENST00000533115 MCM6Q14566 821 aa33.26■■■□□ 2.91
SSSCA1-207ENST00000533115 SPECC1Q5M775 1068 aa33.26■■■□□ 2.91
SSSCA1-207ENST00000533115 SYCE2Q6PIF2 218 aa33.26■■■□□ 2.91
SSSCA1-207ENST00000533115 TAS1R1Q7RTX1 841 aa33.26■■■□□ 2.91
SSSCA1-207ENST00000533115 RNF168Q8IYW5 571 aaPredicted RBP33.26■■■□□ 2.91
SSSCA1-207ENST00000533115 TMEM161BQ8NDZ6 487 aa33.26■■■□□ 2.91
SSSCA1-207ENST00000533115 KHSRPQ92945 711 aaKnown RBP eCLIP33.26■■■□□ 2.91
SSSCA1-207ENST00000533115 USP28Q96RU2 1077 aa33.26■■■□□ 2.91
SSSCA1-207ENST00000533115 POP1Q99575 1024 aaKnown RBP33.26■■■□□ 2.91
SSSCA1-207ENST00000533115 CXCL16Q9H2A7 254 aa33.26■■■□□ 2.91
SSSCA1-207ENST00000533115 MRPL17Q9NRX2 175 aaKnown RBP33.26■■■□□ 2.91
SSSCA1-207ENST00000533115 LARSQ9P2J5 1176 aaKnown RBP33.26■■■□□ 2.91
SSSCA1-207ENST00000533115 LILRB3O75022 631 aa33.25■■■□□ 2.91
SSSCA1-207ENST00000533115 STRN3Q13033 797 aa33.25■■■□□ 2.91
SSSCA1-207ENST00000533115 ZNF568Q3ZCX4 644 aa33.25■■■□□ 2.91
SSSCA1-207ENST00000533115 USP49Q70CQ1 688 aa33.25■■■□□ 2.91
SSSCA1-207ENST00000533115 REEP2Q9BRK0 252 aa33.25■■■□□ 2.91
SSSCA1-207ENST00000533115 EMILIN2Q9BXX0 1053 aa33.25■■■□□ 2.91
SSSCA1-207ENST00000533115 CDT1Q9H211 546 aa33.25■■■□□ 2.91
SSSCA1-207ENST00000533115 MORC2Q9Y6X9 1032 aaPredicted RBP33.25■■■□□ 2.91
SSSCA1-207ENST00000533115 URODP06132 367 aa33.24■■■□□ 2.91
SSSCA1-207ENST00000533115 MAPTP10636 758 aaKnown RBP33.24■■■□□ 2.91
SSSCA1-207ENST00000533115 SUSD6Q92537 303 aa33.24■■■□□ 2.91
SSSCA1-207ENST00000533115 LARP4BQ92615 738 aaKnown RBP33.24■■■□□ 2.91
SSSCA1-207ENST00000533115 CLIC6Q96NY7 704 aa33.24■■■□□ 2.91
SSSCA1-207ENST00000533115 KLHL5Q96PQ7 755 aa33.24■■■□□ 2.91
SSSCA1-207ENST00000533115 SSX2IPQ9Y2D8 614 aa33.24■■■□□ 2.91
SSSCA1-207ENST00000533115 PROZP22891 400 aa33.23■■■□□ 2.91
SSSCA1-207ENST00000533115 GRM5P41594 1212 aa33.23■■■□□ 2.91
SSSCA1-207ENST00000533115 HSP90AA2PQ14568 343 aaPredicted RBP33.23■■■□□ 2.91
SSSCA1-207ENST00000533115 SLC39A14Q15043 492 aa33.23■■■□□ 2.91
SSSCA1-207ENST00000533115 NAB2Q15742 525 aa33.23■■■□□ 2.91
SSSCA1-207ENST00000533115 TPRNQ4KMQ1 711 aa33.23■■■□□ 2.91
SSSCA1-207ENST00000533115 PPFIBP1Q86W92 1011 aa33.23■■■□□ 2.91
SSSCA1-207ENST00000533115 SLC22A17Q8WUG5 538 aa33.23■■■□□ 2.91
SSSCA1-207ENST00000533115 RABGGTAQ92696 567 aa33.23■■■□□ 2.91
SSSCA1-207ENST00000533115 APOL5Q9BWW9 433 aa33.23■■■□□ 2.91
SSSCA1-207ENST00000533115 CACNG4Q9UBN1 327 aa33.23■■■□□ 2.91
SSSCA1-207ENST00000533115 ADAM28Q9UKQ2 775 aa33.23■■■□□ 2.91
SSSCA1-207ENST00000533115 H0YCG3 227 aa33.22■■■□□ 2.91
SSSCA1-207ENST00000533115 C2CD2LO14523 706 aa33.22■■■□□ 2.91
SSSCA1-207ENST00000533115 HSP90AA1P07900 732 aaKnown RBP33.22■■■□□ 2.91
SSSCA1-207ENST00000533115 CNPP09543 421 aaKnown RBP33.22■■■□□ 2.91
SSSCA1-207ENST00000533115 MCF2P10911 925 aa33.22■■■□□ 2.91
SSSCA1-207ENST00000533115 EPCAMP16422 314 aa33.22■■■□□ 2.91
SSSCA1-207ENST00000533115 DDIT3P35638 169 aa33.22■■■□□ 2.91
SSSCA1-207ENST00000533115 NCKAP1LP55160 1127 aa33.22■■■□□ 2.91
SSSCA1-207ENST00000533115 FUT10Q6P4F1 479 aa33.22■■■□□ 2.91
SSSCA1-207ENST00000533115 MPZL3Q6UWV2 235 aa33.22■■■□□ 2.91
SSSCA1-207ENST00000533115 ZBTB33Q86T24 672 aa33.22■■■□□ 2.91
SSSCA1-207ENST00000533115 CEP120Q8N960 986 aa33.22■■■□□ 2.91
SSSCA1-207ENST00000533115 PAAF1Q9BRP4 392 aa33.22■■■□□ 2.91
SSSCA1-207ENST00000533115 TCHPQ9BT92 498 aa33.22■■■□□ 2.91
SSSCA1-207ENST00000533115 CCDC94Q9BW85 323 aaPredicted RBP33.22■■■□□ 2.91
SSSCA1-207ENST00000533115 EPHX3Q9H6B9 360 aa33.22■■■□□ 2.91
SSSCA1-207ENST00000533115 CCDC39Q9UFE4 941 aa33.22■■■□□ 2.91
SSSCA1-207ENST00000533115 CASTOR2A6NHX0 329 aa33.21■■■□□ 2.91
SSSCA1-207ENST00000533115 ABLIM1O14639 778 aa33.21■■■□□ 2.91
SSSCA1-207ENST00000533115 KRT18P05783 430 aaKnown RBP33.21■■■□□ 2.91
SSSCA1-207ENST00000533115 GLUD2P49448 558 aa33.21■■■□□ 2.91
SSSCA1-207ENST00000533115 KIAA0319Q5VV43 1072 aa33.21■■■□□ 2.91
SSSCA1-207ENST00000533115 GPR62Q9BZJ7 368 aa33.21■■■□□ 2.91
SSSCA1-207ENST00000533115 DZANK1Q9NVP4 752 aa33.21■■■□□ 2.91
SSSCA1-207ENST00000533115 TADA2AO75478 443 aa33.2■■■□□ 2.91
SSSCA1-207ENST00000533115 FAM13AO94988 1023 aa33.2■■■□□ 2.91
SSSCA1-207ENST00000533115 BRD1O95696 1058 aa33.2■■■□□ 2.91
SSSCA1-207ENST00000533115 KLRC2P26717 231 aa33.2■■■□□ 2.91
SSSCA1-207ENST00000533115 ZNF131P52739 623 aa33.2■■■□□ 2.91
SSSCA1-207ENST00000533115 YARSP54577 528 aaKnown RBP33.2■■■□□ 2.91
SSSCA1-207ENST00000533115 DSG1Q02413 1049 aa33.2■■■□□ 2.91
SSSCA1-207ENST00000533115 MYCT1Q8N699 235 aa33.2■■■□□ 2.91
SSSCA1-207ENST00000533115 PHF7Q9BWX1 381 aaPredicted RBP33.2■■■□□ 2.91
SSSCA1-207ENST00000533115 PARVGQ9HBI0 331 aa33.2■■■□□ 2.91
SSSCA1-207ENST00000533115 CHST7Q9NS84 486 aa33.2■■■□□ 2.91
SSSCA1-207ENST00000533115 PI4K2BG5E9Z4 385 aa33.19■■■□□ 2.9
SSSCA1-207ENST00000533115 TOM1L1O75674 476 aa33.19■■■□□ 2.9
SSSCA1-207ENST00000533115 PDIA4P13667 645 aaKnown RBP33.19■■■□□ 2.9
SSSCA1-207ENST00000533115 TXLNAP40222 546 aa33.19■■■□□ 2.9
SSSCA1-207ENST00000533115 NASPP49321 788 aaPredicted RBP33.19■■■□□ 2.9
SSSCA1-207ENST00000533115 OSTNP61366 133 aa33.19■■■□□ 2.9
SSSCA1-207ENST00000533115 KIAA1841Q6NSI8 718 aa33.19■■■□□ 2.9
SSSCA1-207ENST00000533115 ZPBP2Q6X784 338 aa33.19■■■□□ 2.9
SSSCA1-207ENST00000533115 HAUS6Q7Z4H7 955 aa33.19■■■□□ 2.9
SSSCA1-207ENST00000533115 KRI1Q8N9T8 703 aaKnown RBP33.19■■■□□ 2.9
SSSCA1-207ENST00000533115 KCNN1Q92952 543 aa33.19■■■□□ 2.9
SSSCA1-207ENST00000533115 ZBTB45Q96K62 511 aaPredicted RBP33.19■■■□□ 2.9
SSSCA1-207ENST00000533115 C1QTNF1Q9BXJ1 281 aa33.19■■■□□ 2.9
SSSCA1-207ENST00000533115 TOPORSQ9NS56 1045 aaPredicted RBP33.19■■■□□ 2.9
SSSCA1-207ENST00000533115 STK17AQ9UEE5 414 aa33.19■■■□□ 2.9
SSSCA1-207ENST00000533115 CLCN4P51793 760 aa33.18■■■□□ 2.9
SSSCA1-207ENST00000533115 ITIH3Q06033 890 aa33.18■■■□□ 2.9
SSSCA1-207ENST00000533115 CBX2Q14781 532 aaPredicted RBP33.18■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms