RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 CCDC197Q8NCU1 140 aa19.32■□□□□ 0.68
UBXN1-213ENST00000532904 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.32■□□□□ 0.684e-9■□□□□ 9
UBXN1-213ENST00000532904 LMO3Q8TAP4 145 aa19.32■□□□□ 0.68
UBXN1-213ENST00000532904 TAAR1Q96RJ0 339 aa19.32■□□□□ 0.68
UBXN1-213ENST00000532904 TACO1Q9BSH4 297 aaKnown RBP19.32■□□□□ 0.68
UBXN1-213ENST00000532904 TMEM109Q9BVC6 243 aa19.32■□□□□ 0.68
UBXN1-213ENST00000532904 HOMER2Q9NSB8 354 aa19.32■□□□□ 0.68
UBXN1-213ENST00000532904 ODF2LQ9ULJ1 636 aa19.32■□□□□ 0.68
UBXN1-213ENST00000532904 AFG3L2Q9Y4W6 797 aa19.32■□□□□ 0.68
UBXN1-213ENST00000532904 PFASO15067 1338 aa19.32■□□□□ 0.68
UBXN1-213ENST00000532904 MYH11P35749 1972 aa19.31■□□□□ 0.68
UBXN1-213ENST00000532904 MMEP08473 750 aa19.31■□□□□ 0.68
UBXN1-213ENST00000532904 KRT13P13646 458 aa19.31■□□□□ 0.68
UBXN1-213ENST00000532904 BFSP1Q12934 665 aa19.31■□□□□ 0.68
UBXN1-213ENST00000532904 SNCBQ16143 134 aa19.31■□□□□ 0.68
UBXN1-213ENST00000532904 CATSPERGQ6ZRH7 1159 aa19.31■□□□□ 0.68
UBXN1-213ENST00000532904 MIER3Q7Z3K6 550 aa19.31■□□□□ 0.68
UBXN1-213ENST00000532904 SLC9A9Q8IVB4 645 aa19.31■□□□□ 0.68
UBXN1-213ENST00000532904 FAM178BQ8IXR5 827 aa19.31■□□□□ 0.68
UBXN1-213ENST00000532904 PRELID2Q8N945 189 aa19.31■□□□□ 0.68
UBXN1-213ENST00000532904 MAGEC3Q8TD91 643 aa19.31■□□□□ 0.68
UBXN1-213ENST00000532904 C18orf8Q96DM3 657 aa19.31■□□□□ 0.68
UBXN1-213ENST00000532904 LXNQ9BS40 222 aa19.31■□□□□ 0.68
UBXN1-213ENST00000532904 PXMP2Q9NR77 195 aa19.31■□□□□ 0.68
UBXN1-213ENST00000532904 RNF146Q9NTX7 359 aa19.31■□□□□ 0.68
UBXN1-213ENST00000532904 PARP2Q9UGN5 583 aa19.31■□□□□ 0.68
UBXN1-213ENST00000532904 PAPPA2Q9BXP8 1791 aa19.31■□□□□ 0.68
UBXN1-213ENST00000532904 CCT8L1PA6NM43 557 aa19.31■□□□□ 0.68
UBXN1-213ENST00000532904 PODXLO00592 558 aa19.31■□□□□ 0.68
UBXN1-213ENST00000532904 GGPS1O95749 300 aa19.31■□□□□ 0.68
UBXN1-213ENST00000532904 AGTP01019 485 aa19.31■□□□□ 0.68
UBXN1-213ENST00000532904 P4HBP07237 508 aaKnown RBP19.31■□□□□ 0.68
UBXN1-213ENST00000532904 ADCY2Q08462 1091 aa19.31■□□□□ 0.68
UBXN1-213ENST00000532904 SLC29A2Q14542 456 aa19.31■□□□□ 0.68
UBXN1-213ENST00000532904 C6orf118Q5T5N4 469 aa19.31■□□□□ 0.68
UBXN1-213ENST00000532904 AADACL2Q6P093 401 aa19.31■□□□□ 0.68
UBXN1-213ENST00000532904 SLC30A10Q6XR72 485 aa19.31■□□□□ 0.68
UBXN1-213ENST00000532904 ZSWIM1Q9BR11 485 aa19.31■□□□□ 0.68
UBXN1-213ENST00000532904 PDCD2LQ9BRP1 358 aa19.31■□□□□ 0.68
UBXN1-213ENST00000532904 AZI2Q9H6S1 392 aa19.31■□□□□ 0.68
UBXN1-213ENST00000532904 ADARB2Q9NS39 739 aaKnown RBP19.31■□□□□ 0.68
UBXN1-213ENST00000532904 PCDHA3Q9Y5H8 950 aa19.31■□□□□ 0.68
UBXN1-213ENST00000532904 LOC285556D6RIA3 1793 aa19.3■□□□□ 0.68
UBXN1-213ENST00000532904 ZBTB39O15060 712 aa19.3■□□□□ 0.68
UBXN1-213ENST00000532904 RGS16O15492 202 aaPredicted RBP19.3■□□□□ 0.68
UBXN1-213ENST00000532904 LYPLA2O95372 231 aa19.3■□□□□ 0.68
UBXN1-213ENST00000532904 RPL21P46778 160 aaKnown RBP19.3■□□□□ 0.68
UBXN1-213ENST00000532904 PDE4CQ08493 712 aa19.3■□□□□ 0.68
UBXN1-213ENST00000532904 MTMR1Q13613 665 aa19.3■□□□□ 0.68
UBXN1-213ENST00000532904 ITIH4Q14624 930 aa19.3■□□□□ 0.68
UBXN1-213ENST00000532904 WLSQ5T9L3 541 aa19.3■□□□□ 0.68
UBXN1-213ENST00000532904 PIGWQ7Z7B1 504 aa19.3■□□□□ 0.68
UBXN1-213ENST00000532904 SLC20A1Q8WUM9 679 aa19.3■□□□□ 0.68
UBXN1-213ENST00000532904 VTI1AQ96AJ9 217 aa19.3■□□□□ 0.68
UBXN1-213ENST00000532904 RPS6KC1Q96S38 1066 aa19.3■□□□□ 0.68
UBXN1-213ENST00000532904 RMDN3Q96TC7 470 aa19.3■□□□□ 0.68
UBXN1-213ENST00000532904 SELENOSQ9BQE4 189 aa19.3■□□□□ 0.68
UBXN1-213ENST00000532904 CCDC134Q9H6E4 229 aa19.3■□□□□ 0.68
UBXN1-213ENST00000532904 CTTNBP2NLQ9P2B4 639 aa19.3■□□□□ 0.68
UBXN1-213ENST00000532904 ZNF214Q9UL59 606 aaPredicted RBP19.3■□□□□ 0.68
UBXN1-213ENST00000532904 TRPC6Q9Y210 931 aa19.3■□□□□ 0.68
UBXN1-213ENST00000532904 PTPRFP10586 1907 aa19.3■□□□□ 0.68
UBXN1-213ENST00000532904 MYBPC2Q14324 1141 aa19.29■□□□□ 0.68
UBXN1-213ENST00000532904 KRT35Q92764 455 aa19.29■□□□□ 0.68
UBXN1-213ENST00000532904 STRA6Q9BX79 667 aa19.29■□□□□ 0.68
UBXN1-213ENST00000532904 HOXC10Q9NYD6 342 aa19.29■□□□□ 0.68
UBXN1-213ENST00000532904 WRAP73Q9P2S5 460 aaPredicted RBP19.29■□□□□ 0.68
UBXN1-213ENST00000532904 MTRF1LQ9UGC7 380 aaKnown RBP19.29■□□□□ 0.68
UBXN1-213ENST00000532904 TLDC2A0PJX2 215 aa19.29■□□□□ 0.68
UBXN1-213ENST00000532904 MAFGO15525 162 aa19.29■□□□□ 0.68
UBXN1-213ENST00000532904 LRRN2O75325 713 aa19.29■□□□□ 0.68
UBXN1-213ENST00000532904 USP2O75604 605 aaPredicted RBP19.29■□□□□ 0.68
UBXN1-213ENST00000532904 FTLP02792 175 aaPredicted RBP19.29■□□□□ 0.68
UBXN1-213ENST00000532904 GPC5P78333 572 aa19.29■□□□□ 0.68
UBXN1-213ENST00000532904 ODR4Q5SWX8 454 aa19.29■□□□□ 0.68
UBXN1-213ENST00000532904 TTC27Q6P3X3 843 aa19.29■□□□□ 0.68
UBXN1-213ENST00000532904 FAM228AQ86W67 206 aa19.29■□□□□ 0.68
UBXN1-213ENST00000532904 ANKS4BQ8N8V4 417 aa19.29■□□□□ 0.68
UBXN1-213ENST00000532904 WNK4Q96J92 1243 aa19.29■□□□□ 0.68
UBXN1-213ENST00000532904 SEMA4AQ9H3S1 761 aa19.29■□□□□ 0.68
UBXN1-213ENST00000532904 DBR1Q9UK59 544 aaKnown RBP19.29■□□□□ 0.68
UBXN1-213ENST00000532904 EXOC3O60645 756 aa19.28■□□□□ 0.68
UBXN1-213ENST00000532904 EIF2AK2P19525 551 aaKnown RBP19.28■□□□□ 0.68
UBXN1-213ENST00000532904 MARCKSL1P49006 195 aa19.28■□□□□ 0.68
UBXN1-213ENST00000532904 PEX5P50542 639 aa19.28■□□□□ 0.68
UBXN1-213ENST00000532904 IFI35P80217 286 aaPredicted RBP19.28■□□□□ 0.68
UBXN1-213ENST00000532904 CYP1B1Q16678 543 aa19.28■□□□□ 0.68
UBXN1-213ENST00000532904 TNFAIP8L3Q5GJ75 292 aa19.28■□□□□ 0.68
UBXN1-213ENST00000532904 ARHGEF16Q5VV41 709 aa19.28■□□□□ 0.68
UBXN1-213ENST00000532904 SNRNP48Q6IEG0 339 aaKnown RBP19.28■□□□□ 0.68
UBXN1-213ENST00000532904 NSMFQ6X4W1 530 aa19.28■□□□□ 0.68
UBXN1-213ENST00000532904 ZDHHC14Q8IZN3 488 aa19.28■□□□□ 0.68
UBXN1-213ENST00000532904 GPATCH11Q8N954 259 aa19.28■□□□□ 0.68
UBXN1-213ENST00000532904 MORC4Q8TE76 937 aa19.28■□□□□ 0.68
UBXN1-213ENST00000532904 TPX2Q9ULW0 747 aaKnown RBP19.28■□□□□ 0.68
UBXN1-213ENST00000532904 RIPK3Q9Y572 518 aa19.28■□□□□ 0.68
UBXN1-213ENST00000532904 MTA2O94776 668 aa19.28■□□□□ 0.68
UBXN1-213ENST00000532904 GSTA1P08263 222 aa19.28■□□□□ 0.68
UBXN1-213ENST00000532904 CCND2P30279 289 aa19.28■□□□□ 0.68
UBXN1-213ENST00000532904 SLMAPQ14BN4 828 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms