RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 ADGRA3Q8IWK6 1321 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 UBA6A0AVT1 1052 aaPredicted RBP8.54□□□□□ -1.04
CTNND1-231ENST00000532463 TCP11X1B4DZS4 312 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 BTN3A3O00478 584 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 DYNC1LI2O43237 492 aaPredicted RBP8.54□□□□□ -1.04
CTNND1-231ENST00000532463 CHP2O43745 196 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 EXTL3O43909 919 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 PTPN1P18031 435 aaKnown RBP8.54□□□□□ -1.04
CTNND1-231ENST00000532463 WARSP23381 471 aaKnown RBP8.54□□□□□ -1.04
CTNND1-231ENST00000532463 HSD3B2P26439 372 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 PDIA2Q13087 525 aaKnown RBP8.54□□□□□ -1.04
CTNND1-231ENST00000532463 PKP1Q13835 747 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 PMF1Q6P1K2 205 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 RASSF6Q6ZTQ3 369 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 PLA2G4DQ86XP0 818 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 RNF135Q8IUD6 432 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 FAM172AQ8WUF8 416 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 ASNSD1Q9NWL6 643 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 FAM153AQ9UHL3 310 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 MTO1Q9Y2Z2 717 aaKnown RBP8.54□□□□□ -1.04
CTNND1-231ENST00000532463 NSD2O96028 1365 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 TOPBP1Q92547 1522 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 FOXP2O15409 715 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 HIBADHP31937 336 aaKnown RBP8.54□□□□□ -1.04
CTNND1-231ENST00000532463 FEN1P39748 380 aaKnown RBP8.54□□□□□ -1.04
CTNND1-231ENST00000532463 MXI1P50539 228 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 KCNK10P57789 538 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 ATP13A5Q4VNC0 1218 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 SYTL3Q4VX76 610 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 LIN54Q6MZP7 749 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 FASTKD5Q7L8L6 764 aaKnown RBP8.54□□□□□ -1.04
CTNND1-231ENST00000532463 EFL1Q7Z2Z2 1120 aaKnown RBP8.54□□□□□ -1.04
CTNND1-231ENST00000532463 MB21D1Q8N884 522 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 AGR3Q8TD06 166 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 ELMO2Q96JJ3 720 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 SMAD5Q99717 465 aaKnown RBP8.54□□□□□ -1.04
CTNND1-231ENST00000532463 FAM192AQ9GZU8 254 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 HPS4Q9NQG7 708 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 SMARCAL1Q9NZC9 954 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 XPO7Q9UIA9 1087 aaKnown RBP8.54□□□□□ -1.04
CTNND1-231ENST00000532463 GRID2IPA4D2P6 1211 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 MEI4A8MW99 385 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 E9PBE3 544 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 F8W810 466 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 AHCYL1O43865 530 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 CAND2O75155 1236 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 CLPTM1O96005 669 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 AGTP01019 485 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 TGFBR2P37173 567 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 OTUD4Q01804 1114 aaKnown RBP8.54□□□□□ -1.04
CTNND1-231ENST00000532463 RCN1Q15293 331 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 Q4G0T1 1027 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 DGKKQ5KSL6 1271 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 SPANXN2Q5MJ10 180 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 CDC73Q6P1J9 531 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 ZNF473Q8WTR7 871 aaKnown RBP8.54□□□□□ -1.04
CTNND1-231ENST00000532463 SYMPKQ92797 1274 aaKnown RBP8.54□□□□□ -1.04
CTNND1-231ENST00000532463 HEXIM2Q96MH2 286 aaKnown RBP8.54□□□□□ -1.04
CTNND1-231ENST00000532463 XPO6Q96QU8 1125 aaKnown RBP8.54□□□□□ -1.04
CTNND1-231ENST00000532463 ZFATQ9P243 1243 aa8.54□□□□□ -1.04
CTNND1-231ENST00000532463 NXF1Q9UBU9 619 aaKnown RBP8.54□□□□□ -1.04
CTNND1-231ENST00000532463 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.54□□□□□ -1.04
CTNND1-231ENST00000532463 B2RBV5 119 aa8.53□□□□□ -1.04
CTNND1-231ENST00000532463 AIM2O14862 343 aa8.53□□□□□ -1.04
CTNND1-231ENST00000532463 JAK1P23458 1154 aa8.53□□□□□ -1.04
CTNND1-231ENST00000532463 TFAMQ00059 246 aaKnown RBP8.53□□□□□ -1.04
CTNND1-231ENST00000532463 STX4Q12846 297 aa8.53□□□□□ -1.04
CTNND1-231ENST00000532463 R3HDM1Q15032 1099 aaKnown RBP8.53□□□□□ -1.04
CTNND1-231ENST00000532463 MDH1BQ5I0G3 518 aa8.53□□□□□ -1.04
CTNND1-231ENST00000532463 TAS2R42Q7RTR8 314 aa8.53□□□□□ -1.04
CTNND1-231ENST00000532463 RDM1Q8NG50 284 aa8.53□□□□□ -1.04
CTNND1-231ENST00000532463 TBC1D22AQ8WUA7 517 aa8.53□□□□□ -1.04
CTNND1-231ENST00000532463 SLC7A3Q8WY07 619 aa8.53□□□□□ -1.04
CTNND1-231ENST00000532463 TRIM62Q9BVG3 475 aa8.53□□□□□ -1.04
CTNND1-231ENST00000532463 TAF1DQ9H5J8 278 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-231ENST00000532463 THAP9Q9H5L6 903 aa8.53□□□□□ -1.04
CTNND1-231ENST00000532463 C8orf4Q9NR00 106 aa8.53□□□□□ -1.04
CTNND1-231ENST00000532463 RGS18Q9NS28 235 aa8.53□□□□□ -1.04
CTNND1-231ENST00000532463 ARPP21Q9UBL0 812 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-231ENST00000532463 LRFN2Q9ULH4 789 aa8.53□□□□□ -1.04
CTNND1-231ENST00000532463 PCDHA7Q9UN72 937 aa8.53□□□□□ -1.04
CTNND1-231ENST00000532463 CDYLQ9Y232 598 aa8.53□□□□□ -1.04
CTNND1-231ENST00000532463 FARP1Q9Y4F1 1045 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-231ENST00000532463 SF3B1O75533 1304 aaKnown RBP eCLIP8.53□□□□□ -1.045e-6■■■■■ 59.8
CTNND1-231ENST00000532463 KANSL1LA0AUZ9 987 aa8.53□□□□□ -1.04
CTNND1-231ENST00000532463 TRIM43BA6NCK2 446 aa8.53□□□□□ -1.04
CTNND1-231ENST00000532463 SGSM2O43147 1006 aa8.53□□□□□ -1.04
CTNND1-231ENST00000532463 MDH1P40925 334 aaKnown RBP8.53□□□□□ -1.04
CTNND1-231ENST00000532463 CCNIQ14094 377 aa8.53□□□□□ -1.04
CTNND1-231ENST00000532463 HEATR6Q6AI08 1181 aaKnown RBP8.53□□□□□ -1.04
CTNND1-231ENST00000532463 KIAA0408Q6ZU52 694 aa8.53□□□□□ -1.04
CTNND1-231ENST00000532463 VN1R5Q7Z5H4 357 aa8.53□□□□□ -1.04
CTNND1-231ENST00000532463 CDKL3Q8IVW4 592 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-231ENST00000532463 OR6P1Q8NGX9 317 aa8.53□□□□□ -1.04
CTNND1-231ENST00000532463 RBM17Q96I25 401 aaKnown RBP8.53□□□□□ -1.04
CTNND1-231ENST00000532463 MAGED4Q96JG8 741 aa8.53□□□□□ -1.04
CTNND1-231ENST00000532463 FAM227BQ96M60 508 aa8.53□□□□□ -1.04
CTNND1-231ENST00000532463 BCL2L14Q9BZR8 327 aa8.53□□□□□ -1.04
CTNND1-231ENST00000532463 PAIP1Q9H074 479 aaKnown RBP8.53□□□□□ -1.04
CTNND1-231ENST00000532463 F8VZ95 297 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms