RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 PCDHB1Q9Y5F3 818 aa4.98□□□□□ -1.61
AC055878.1-201ENST00000531858 USP19O94966 1318 aa4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 FSD2A1L4K1 749 aa4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 PRAMEF25A6NGN4 478 aa4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 IPO5O00410 1097 aaKnown RBP4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 HGSO14964 777 aaPredicted RBP4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 TADA3O75528 432 aa4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 FAM155BO75949 473 aa4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 TBX18O95935 607 aa4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 POLBP06746 335 aa4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 ANXA2P07355 339 aaKnown RBP4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 CKMT1AP12532 417 aa4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 MYL4P12829 197 aa4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 GSPT1P15170 499 aaKnown RBP4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 ELNP15502 786 aa4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 FPR2P25090 351 aa4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 LIFRP42702 1097 aa4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 NRG3P56975 720 aa4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 HTRA4P83105 476 aaPredicted RBP4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 MAPK7Q13164 816 aa4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 CDK5R2Q13319 367 aa4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 IL10RAQ13651 578 aa4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 PLS1Q14651 629 aa4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 MYBPC3Q14896 1274 aa4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 PLCL1Q15111 1095 aa4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 TAF5Q15542 800 aa4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 MEA1Q16626 185 aa4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 AOC3Q16853 763 aa4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 GAB4Q2WGN9 574 aa4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 TBC1D10BQ4KMP7 808 aaPredicted RBP4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 SLC45A4Q5BKX6 768 aa4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 GPATCH4Q5T3I0 446 aaKnown RBP4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 STEAP3Q658P3 488 aa4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 SLFN12LQ6IEE8 588 aa4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 GGT6Q6P531 493 aa4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 TMPRSS7Q7RTY8 843 aa4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 HEATR3Q7Z4Q2 680 aa4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 MOGAT3Q86VF5 341 aa4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 ZSCAN30Q86W11 494 aa4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 CILP2Q8IUL8 1156 aa4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 GLB1L3Q8NCI6 653 aaPredicted RBP4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 STT3BQ8TCJ2 826 aa4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 CALML6Q8TD86 181 aa4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 ZNF384Q8TF68 577 aa4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 MAELQ96JY0 434 aaKnown RBP4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 PREBQ9HCU5 417 aa4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 ERVK13-1Q9NX77 482 aa4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 BTG4Q9NY30 223 aa4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 TNFRSF10DQ9UBN6 386 aa4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 FEZ2Q9UHY8 353 aaPredicted RBP4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 GPR34Q9UPC5 381 aa4.97□□□□□ -1.61
AC055878.1-201ENST00000531858 FAM95CA0A1B0GW59 222 aa4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 A0A1W2PQ45 241 aaPredicted RBP4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 A0A1W2PQY0 241 aa4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 F8W8V4 182 aa4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 ARHGAP6O43182 974 aa4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 DYNC1LI2O43237 492 aaPredicted RBP4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 ENDOD1O94919 500 aa4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 HNRNPCP07910 306 aaKnown RBP eCLIP4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 XPAP23025 273 aaPredicted RBP4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 GALNSP34059 522 aa4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 GALK1P51570 392 aa4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 ARFIP2P53365 341 aa4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 SUMO3P55854 103 aaPredicted RBP4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 MEF2AQ02078 507 aaPredicted RBP4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 PPARAQ07869 468 aa4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 CYP27C1Q4G0S4 372 aa4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 CCDC30Q5VVM6 783 aa4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 PRAMEF9Q5VWM5 478 aa4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 ARMC3Q5W041 872 aa4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 PAOXQ6QHF9 649 aa4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 LMBR1LQ6UX01 489 aa4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 KRT73Q86Y46 540 aa4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 GLB1L2Q8IW92 636 aa4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 HIPK4Q8NE63 616 aa4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 BRIX1Q8TDN6 353 aaKnown RBP4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 OTUD7AQ8TE49 926 aaPredicted RBP4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 FBLIM1Q8WUP2 373 aa4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 IPCEF1Q8WWN9 437 aaPredicted RBP4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 GAB3Q8WWW8 586 aa4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 THAP4Q8WY91 577 aa4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 HTRA1Q92743 480 aa4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 ERCC4Q92889 916 aaPredicted RBP4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 KAT5Q92993 513 aa4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 CYFIP2Q96F07 1278 aa4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 FAM46AQ96IP4 442 aaKnown RBP4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 FMNL2Q96PY5 1086 aa4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 NELL2Q99435 816 aa4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 GDF15Q99988 308 aa4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 DPH1Q9BZG8 443 aa4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 PITHD1Q9GZP4 211 aaPredicted RBP4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 PRDM12Q9H4Q4 367 aa4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 MANSC1Q9H8J5 431 aa4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 ARMT1Q9H993 441 aa4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 MKNK2Q9HBH9 465 aa4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 CWC25Q9NXE8 425 aaPredicted RBP4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 COL20A1Q9P218 1284 aa4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 ASH2LQ9UBL3 628 aa4.96□□□□□ -1.62
AC055878.1-201ENST00000531858 ACAD8Q9UKU7 415 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms