RNA–Protein interactions for RNA: ENST00000531056.5

UBXN1-211, Transcript of UBX domain protein 1, humanhuman

TSL 4

Gene UBXN1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-211ENST00000531056 AUTS2Q8WXX7 1259 aa20.85■□□□□ 0.93
UBXN1-211ENST00000531056 STK39Q9UEW8 545 aa20.85■□□□□ 0.93
UBXN1-211ENST00000531056 CD207Q9UJ71 328 aa20.85■□□□□ 0.93
UBXN1-211ENST00000531056 PRG3Q9Y2Y8 225 aaPredicted RBP20.85■□□□□ 0.93
UBXN1-211ENST00000531056 F8W810 466 aa20.84■□□□□ 0.93
UBXN1-211ENST00000531056 SPTLC2O15270 562 aa20.84■□□□□ 0.93
UBXN1-211ENST00000531056 MBTPS2O43462 519 aa20.84■□□□□ 0.93
UBXN1-211ENST00000531056 PPP6R2O75170 966 aa20.84■□□□□ 0.93
UBXN1-211ENST00000531056 YEATS4O95619 227 aa20.84■□□□□ 0.93
UBXN1-211ENST00000531056 BRD1O95696 1058 aa20.84■□□□□ 0.93
UBXN1-211ENST00000531056 CXCL14O95715 111 aa20.84■□□□□ 0.93
UBXN1-211ENST00000531056 TXLNAP40222 546 aa20.84■□□□□ 0.93
UBXN1-211ENST00000531056 COASYQ13057 564 aa20.84■□□□□ 0.93
UBXN1-211ENST00000531056 SMAD4Q13485 552 aaKnown RBP20.84■□□□□ 0.93
UBXN1-211ENST00000531056 NAB2Q15742 525 aa20.84■□□□□ 0.93
UBXN1-211ENST00000531056 ZNF568Q3ZCX4 644 aa20.84■□□□□ 0.93
UBXN1-211ENST00000531056 TMEM184AQ6ZMB5 413 aa20.84■□□□□ 0.93
UBXN1-211ENST00000531056 PARVGQ9HBI0 331 aa20.84■□□□□ 0.93
UBXN1-211ENST00000531056 TFIP11Q9UBB9 837 aaKnown RBP20.84■□□□□ 0.93
UBXN1-211ENST00000531056 GDAQ9Y2T3 454 aa20.84■□□□□ 0.93
UBXN1-211ENST00000531056 TRIP11Q15643 1979 aa20.84■□□□□ 0.93
UBXN1-211ENST00000531056 A0A087X0B3 334 aa20.83■□□□□ 0.93
UBXN1-211ENST00000531056 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.83■□□□□ 0.93
UBXN1-211ENST00000531056 H0YCG3 227 aa20.83■□□□□ 0.93
UBXN1-211ENST00000531056 CLASP2O75122 1294 aaKnown RBP20.83■□□□□ 0.93
UBXN1-211ENST00000531056 FAM13AO94988 1023 aa20.83■□□□□ 0.93
UBXN1-211ENST00000531056 GRM5P41594 1212 aa20.83■□□□□ 0.93
UBXN1-211ENST00000531056 STRN3Q13033 797 aa20.83■□□□□ 0.93
UBXN1-211ENST00000531056 BMS1Q14692 1282 aaKnown RBP20.83■□□□□ 0.93
UBXN1-211ENST00000531056 PTPN14Q15678 1187 aa20.83■□□□□ 0.93
UBXN1-211ENST00000531056 RRAGBQ5VZM2 374 aa20.83■□□□□ 0.93
UBXN1-211ENST00000531056 MPZL3Q6UWV2 235 aa20.83■□□□□ 0.93
UBXN1-211ENST00000531056 CEP120Q8N960 986 aa20.83■□□□□ 0.93
UBXN1-211ENST00000531056 SMRP1Q8NCR6 262 aa20.83■□□□□ 0.93
UBXN1-211ENST00000531056 FIZ1Q96SL8 496 aa20.83■□□□□ 0.93
UBXN1-211ENST00000531056 HERC2P3Q9BVR0 1158 aa20.83■□□□□ 0.93
UBXN1-211ENST00000531056 PDCD11Q14690 1871 aaKnown RBP20.82■□□□□ 0.92
UBXN1-211ENST00000531056 SOD2P04179 222 aa20.82■□□□□ 0.92
UBXN1-211ENST00000531056 KRT18P05783 430 aaKnown RBP20.82■□□□□ 0.92
UBXN1-211ENST00000531056 THP07101 528 aa20.82■□□□□ 0.92
UBXN1-211ENST00000531056 MCF2P10911 925 aa20.82■□□□□ 0.92
UBXN1-211ENST00000531056 TUSC3Q13454 348 aa20.82■□□□□ 0.92
UBXN1-211ENST00000531056 SMAD2Q15796 467 aaKnown RBP20.82■□□□□ 0.92
UBXN1-211ENST00000531056 ZPBP2Q6X784 338 aa20.82■□□□□ 0.92
UBXN1-211ENST00000531056 HAUS6Q7Z4H7 955 aa20.82■□□□□ 0.92
UBXN1-211ENST00000531056 ZBTB33Q86T24 672 aa20.82■□□□□ 0.92
UBXN1-211ENST00000531056 FAM178BQ8IXR5 827 aa20.82■□□□□ 0.92
UBXN1-211ENST00000531056 MYCT1Q8N699 235 aa20.82■□□□□ 0.92
UBXN1-211ENST00000531056 ZBTB45Q96K62 511 aaPredicted RBP20.82■□□□□ 0.92
UBXN1-211ENST00000531056 CACNG4Q9UBN1 327 aa20.82■□□□□ 0.92
UBXN1-211ENST00000531056 FAM50BQ9Y247 325 aa20.82■□□□□ 0.92
UBXN1-211ENST00000531056 CITO14578 2027 aa20.82■□□□□ 0.92
UBXN1-211ENST00000531056 K7ENM7 598 aa20.81■□□□□ 0.92
UBXN1-211ENST00000531056 LILRB3O75022 631 aa20.81■□□□□ 0.92
UBXN1-211ENST00000531056 TBCAO75347 108 aaKnown RBP20.81■□□□□ 0.92
UBXN1-211ENST00000531056 NR1I2O75469 434 aa20.81■□□□□ 0.92
UBXN1-211ENST00000531056 TOM1L1O75674 476 aa20.81■□□□□ 0.92
UBXN1-211ENST00000531056 SCP2P22307 547 aa20.81■□□□□ 0.92
UBXN1-211ENST00000531056 CA8P35219 290 aa20.81■□□□□ 0.92
UBXN1-211ENST00000531056 LLGL2Q6P1M3 1020 aa20.81■□□□□ 0.92
UBXN1-211ENST00000531056 CCDC73Q6ZRK6 1079 aa20.81■□□□□ 0.92
UBXN1-211ENST00000531056 TAS1R1Q7RTX1 841 aa20.81■□□□□ 0.92
UBXN1-211ENST00000531056 PPP1R10Q96QC0 940 aaKnown RBP20.81■□□□□ 0.92
UBXN1-211ENST00000531056 PAAF1Q9BRP4 392 aa20.81■□□□□ 0.92
UBXN1-211ENST00000531056 COLEC11Q9BWP8 271 aa20.81■□□□□ 0.92
UBXN1-211ENST00000531056 HCFC2Q9Y5Z7 792 aa20.81■□□□□ 0.92
UBXN1-211ENST00000531056 CASTOR2A6NHX0 329 aa20.8■□□□□ 0.92
UBXN1-211ENST00000531056 MYMKA6NI61 221 aa20.8■□□□□ 0.92
UBXN1-211ENST00000531056 TRAK2O60296 914 aa20.8■□□□□ 0.92
UBXN1-211ENST00000531056 SRGAP2BP0DMP2 458 aa20.8■□□□□ 0.92
UBXN1-211ENST00000531056 HSP90AA2PQ14568 343 aaPredicted RBP20.8■□□□□ 0.92
UBXN1-211ENST00000531056 NOLC1Q14978 699 aaKnown RBP eCLIP20.8■□□□□ 0.92
UBXN1-211ENST00000531056 FOXD4L6Q3SYB3 417 aaPredicted RBP20.8■□□□□ 0.92
UBXN1-211ENST00000531056 XKR4Q5GH76 650 aa20.8■□□□□ 0.92
UBXN1-211ENST00000531056 ANKRD54Q6NXT1 300 aa20.8■□□□□ 0.92
UBXN1-211ENST00000531056 ALKAL1Q6UXT8 129 aa20.8■□□□□ 0.92
UBXN1-211ENST00000531056 FOXD4L3Q6VB84 417 aaPredicted RBP20.8■□□□□ 0.92
UBXN1-211ENST00000531056 RABGGTAQ92696 567 aa20.8■□□□□ 0.92
UBXN1-211ENST00000531056 DDX12PQ92771 950 aa20.8■□□□□ 0.92
UBXN1-211ENST00000531056 CCDC94Q9BW85 323 aaPredicted RBP20.8■□□□□ 0.92
UBXN1-211ENST00000531056 HAPLN2Q9GZV7 340 aa20.8■□□□□ 0.92
UBXN1-211ENST00000531056 ANKFY1Q9P2R3 1169 aa20.8■□□□□ 0.92
UBXN1-211ENST00000531056 ADAM28Q9UKQ2 775 aa20.8■□□□□ 0.92
UBXN1-211ENST00000531056 TBX20Q9UMR3 447 aa20.8■□□□□ 0.92
UBXN1-211ENST00000531056 MEFVO15553 781 aaPredicted RBP20.79■□□□□ 0.92
UBXN1-211ENST00000531056 PIGRP01833 764 aa20.79■□□□□ 0.92
UBXN1-211ENST00000531056 STAT6P42226 847 aa20.79■□□□□ 0.92
UBXN1-211ENST00000531056 OSTNP61366 133 aa20.79■□□□□ 0.92
UBXN1-211ENST00000531056 MCL1Q07820 350 aa20.79■□□□□ 0.92
UBXN1-211ENST00000531056 GLRA4Q5JXX5 417 aa20.79■□□□□ 0.92
UBXN1-211ENST00000531056 ATL3Q6DD88 541 aa20.79■□□□□ 0.92
UBXN1-211ENST00000531056 FUT10Q6P4F1 479 aa20.79■□□□□ 0.92
UBXN1-211ENST00000531056 SV2BQ7L1I2 683 aa20.79■□□□□ 0.92
UBXN1-211ENST00000531056 DYMQ7RTS9 669 aa20.79■□□□□ 0.92
UBXN1-211ENST00000531056 CASP10Q92851 521 aa20.79■□□□□ 0.92
UBXN1-211ENST00000531056 DNAJC19Q96DA6 116 aa20.79■□□□□ 0.92
UBXN1-211ENST00000531056 SNX27Q96L92 541 aa20.79■□□□□ 0.92
UBXN1-211ENST00000531056 TCHPQ9BT92 498 aa20.79■□□□□ 0.92
UBXN1-211ENST00000531056 GPR62Q9BZJ7 368 aa20.79■□□□□ 0.92
UBXN1-211ENST00000531056 ZHX3Q9H4I2 956 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms