RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 CCDC105Q8IYK2 499 aa17.49■□□□□ 0.39
CHMP4A-204ENST00000530996 ERMNQ8TAM6 284 aa17.49■□□□□ 0.39
CHMP4A-204ENST00000530996 ZNF707Q96C28 371 aaPredicted RBP17.49■□□□□ 0.39
CHMP4A-204ENST00000530996 TMEM60Q9H2L4 133 aa17.49■□□□□ 0.39
CHMP4A-204ENST00000530996 TUFT1Q9NNX1 390 aa17.49■□□□□ 0.39
CHMP4A-204ENST00000530996 USP34Q70CQ2 3546 aa17.48■□□□□ 0.39
CHMP4A-204ENST00000530996 A0A1B0GUA9 196 aa17.48■□□□□ 0.39
CHMP4A-204ENST00000530996 PROB1E7EW31 1015 aa17.48■□□□□ 0.39
CHMP4A-204ENST00000530996 PI15O43692 258 aa17.48■□□□□ 0.39
CHMP4A-204ENST00000530996 KIF4AO95239 1232 aa17.48■□□□□ 0.39
CHMP4A-204ENST00000530996 ANGPT1Q15389 498 aa17.48■□□□□ 0.39
CHMP4A-204ENST00000530996 MAPK6Q16659 721 aa17.48■□□□□ 0.39
CHMP4A-204ENST00000530996 RTP2Q5QGT7 225 aa17.48■□□□□ 0.39
CHMP4A-204ENST00000530996 CDCA2Q69YH5 1023 aaPredicted RBP17.48■□□□□ 0.39
CHMP4A-204ENST00000530996 PPP4R3CPQ6ZMV5 832 aa17.48■□□□□ 0.39
CHMP4A-204ENST00000530996 HDAC7Q8WUI4 952 aa17.48■□□□□ 0.39
CHMP4A-204ENST00000530996 NKD2Q969F2 451 aaPredicted RBP17.48■□□□□ 0.39
CHMP4A-204ENST00000530996 MTMR9Q96QG7 549 aa17.48■□□□□ 0.39
CHMP4A-204ENST00000530996 PDZD7Q9H5P4 517 aa17.48■□□□□ 0.39
CHMP4A-204ENST00000530996 CHST7Q9NS84 486 aa17.48■□□□□ 0.39
CHMP4A-204ENST00000530996 FNIP2Q9P278 1114 aa17.48■□□□□ 0.39
CHMP4A-204ENST00000530996 EPS15L1Q9UBC2 864 aa17.48■□□□□ 0.39
CHMP4A-204ENST00000530996 POLIQ9UNA4 740 aa17.48■□□□□ 0.39
CHMP4A-204ENST00000530996 ZFHX2Q9C0A1 2572 aaPredicted RBP17.47■□□□□ 0.39
CHMP4A-204ENST00000530996 MED24O75448 989 aa17.47■□□□□ 0.39
CHMP4A-204ENST00000530996 RECQL4O94761 1208 aa17.47■□□□□ 0.39
CHMP4A-204ENST00000530996 EFEMP2O95967 443 aa17.47■□□□□ 0.39
CHMP4A-204ENST00000530996 OR52Z1P0C646 297 aa17.47■□□□□ 0.39
CHMP4A-204ENST00000530996 SRFP11831 508 aa17.47■□□□□ 0.39
CHMP4A-204ENST00000530996 NPR3P17342 541 aa17.47■□□□□ 0.39
CHMP4A-204ENST00000530996 PSMD5Q16401 504 aa17.47■□□□□ 0.39
CHMP4A-204ENST00000530996 FAM171A1Q5VUB5 890 aa17.47■□□□□ 0.39
CHMP4A-204ENST00000530996 CATSPER3Q86XQ3 398 aa17.47■□□□□ 0.39
CHMP4A-204ENST00000530996 DTWD2Q8NBA8 298 aa17.47■□□□□ 0.39
CHMP4A-204ENST00000530996 GSTCDQ8NEC7 633 aa17.47■□□□□ 0.39
CHMP4A-204ENST00000530996 ST13P5Q8NFI4 369 aaPredicted RBP17.47■□□□□ 0.39
CHMP4A-204ENST00000530996 NACC1Q96RE7 527 aa17.47■□□□□ 0.39
CHMP4A-204ENST00000530996 PAAF1Q9BRP4 392 aa17.47■□□□□ 0.39
CHMP4A-204ENST00000530996 TTPALQ9BTX7 342 aa17.47■□□□□ 0.39
CHMP4A-204ENST00000530996 RHOBTB2Q9BYZ6 727 aa17.47■□□□□ 0.39
CHMP4A-204ENST00000530996 PRKD2Q9BZL6 878 aa17.47■□□□□ 0.39
CHMP4A-204ENST00000530996 NT5C3AQ9H0P0 336 aa17.47■□□□□ 0.39
CHMP4A-204ENST00000530996 TBC1D17Q9HA65 648 aa17.47■□□□□ 0.39
CHMP4A-204ENST00000530996 SNTG2Q9NY99 539 aa17.47■□□□□ 0.39
CHMP4A-204ENST00000530996 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.47■□□□□ 0.39
CHMP4A-204ENST00000530996 THP07101 528 aa17.46■□□□□ 0.39
CHMP4A-204ENST00000530996 SPATA31C1P0DKV0 1188 aa17.46■□□□□ 0.39
CHMP4A-204ENST00000530996 XRCC6P12956 609 aaKnown RBP eCLIP17.46■□□□□ 0.39
CHMP4A-204ENST00000530996 SPECC1Q5M775 1068 aa17.46■□□□□ 0.39
CHMP4A-204ENST00000530996 HAUS3Q68CZ6 603 aa17.46■□□□□ 0.39
CHMP4A-204ENST00000530996 PADI6Q6TGC4 694 aa17.46■□□□□ 0.39
CHMP4A-204ENST00000530996 NOSTRINQ8IVI9 506 aa17.46■□□□□ 0.39
CHMP4A-204ENST00000530996 BSNDQ8WZ55 320 aa17.46■□□□□ 0.39
CHMP4A-204ENST00000530996 C8orf76Q96K31 380 aa17.46■□□□□ 0.39
CHMP4A-204ENST00000530996 KIFC3Q9BVG8 833 aa17.46■□□□□ 0.39
CHMP4A-204ENST00000530996 FBXW11Q9UKB1 542 aa17.46■□□□□ 0.39
CHMP4A-204ENST00000530996 GDAQ9Y2T3 454 aa17.46■□□□□ 0.39
CHMP4A-204ENST00000530996 C2orf16Q68DN1 1984 aa17.46■□□□□ 0.39
CHMP4A-204ENST00000530996 PLXNA3P51805 1871 aa17.46■□□□□ 0.38
CHMP4A-204ENST00000530996 TTLL13PA6NNM8 815 aa17.45■□□□□ 0.38
CHMP4A-204ENST00000530996 ZMYND10O75800 440 aa17.45■□□□□ 0.38
CHMP4A-204ENST00000530996 FSHRP23945 695 aa17.45■□□□□ 0.38
CHMP4A-204ENST00000530996 NAMPTP43490 491 aa17.45■□□□□ 0.38
CHMP4A-204ENST00000530996 ELAVL2Q12926 359 aaKnown RBP17.45■□□□□ 0.38
CHMP4A-204ENST00000530996 PPP2R5AQ15172 486 aa17.45■□□□□ 0.38
CHMP4A-204ENST00000530996 ZNF174Q15697 407 aa17.45■□□□□ 0.38
CHMP4A-204ENST00000530996 DCAF4L1Q3SXM0 396 aa17.45■□□□□ 0.38
CHMP4A-204ENST00000530996 PPM1LQ5SGD2 360 aa17.45■□□□□ 0.38
CHMP4A-204ENST00000530996 CCDC83Q8IWF9 413 aa17.45■□□□□ 0.38
CHMP4A-204ENST00000530996 GPR65Q8IYL9 337 aa17.45■□□□□ 0.38
CHMP4A-204ENST00000530996 SLC44A3Q8N4M1 653 aa17.45■□□□□ 0.38
CHMP4A-204ENST00000530996 KCNG4Q8TDN1 519 aa17.45■□□□□ 0.38
CHMP4A-204ENST00000530996 GPR152Q8TDT2 470 aa17.45■□□□□ 0.38
CHMP4A-204ENST00000530996 NXPE3Q969Y0 559 aa17.45■□□□□ 0.38
CHMP4A-204ENST00000530996 IFT74Q96LB3 600 aa17.45■□□□□ 0.38
CHMP4A-204ENST00000530996 POLR3CQ9BUI4 534 aaPredicted RBP17.45■□□□□ 0.38
CHMP4A-204ENST00000530996 ARHGEF3Q9NR81 526 aa17.45■□□□□ 0.38
CHMP4A-204ENST00000530996 WNT16Q9UBV4 365 aa17.45■□□□□ 0.38
CHMP4A-204ENST00000530996 USP20Q9Y2K6 914 aa17.45■□□□□ 0.38
CHMP4A-204ENST00000530996 NUMBLQ9Y6R0 609 aa17.45■□□□□ 0.38
CHMP4A-204ENST00000530996 KRBA1A5PL33 1030 aa17.44■□□□□ 0.38
CHMP4A-204ENST00000530996 PTGESO14684 152 aa17.44■□□□□ 0.38
CHMP4A-204ENST00000530996 CCL16O15467 120 aa17.44■□□□□ 0.38
CHMP4A-204ENST00000530996 XYLBO75191 536 aa17.44■□□□□ 0.38
CHMP4A-204ENST00000530996 C8AP07357 584 aa17.44■□□□□ 0.38
CHMP4A-204ENST00000530996 LAMP2P13473 410 aa17.44■□□□□ 0.38
CHMP4A-204ENST00000530996 CCT6AP40227 531 aaKnown RBP17.44■□□□□ 0.38
CHMP4A-204ENST00000530996 FAM187BQ17R55 369 aa17.44■□□□□ 0.38
CHMP4A-204ENST00000530996 GLRA4Q5JXX5 417 aa17.44■□□□□ 0.38
CHMP4A-204ENST00000530996 PDXDC1Q6P996 788 aa17.44■□□□□ 0.38
CHMP4A-204ENST00000530996 APBB1IPQ7Z5R6 666 aaPredicted RBP17.44■□□□□ 0.38
CHMP4A-204ENST00000530996 GRASPQ7Z6J2 395 aaPredicted RBP17.44■□□□□ 0.38
CHMP4A-204ENST00000530996 PIK3R5Q8WYR1 880 aa17.44■□□□□ 0.38
CHMP4A-204ENST00000530996 SNX27Q96L92 541 aa17.44■□□□□ 0.38
CHMP4A-204ENST00000530996 FZD8Q9H461 694 aa17.44■□□□□ 0.38
CHMP4A-204ENST00000530996 C1RP00736 705 aa17.43■□□□□ 0.38
CHMP4A-204ENST00000530996 HNRNPA1P09651 372 aaKnown RBP eCLIP17.43■□□□□ 0.38
CHMP4A-204ENST00000530996 CYP11B2P19099 503 aa17.43■□□□□ 0.38
CHMP4A-204ENST00000530996 NTHL1P78549 312 aa17.43■□□□□ 0.38
CHMP4A-204ENST00000530996 HTR4Q13639 388 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms