RNA–Protein interactions for RNA: ENST00000530917.5

UBASH3B-207, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 5

Gene UBASH3B, Length 987 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-207ENST00000530917 DRC7Q8IY82 874 aa13.06□□□□□ -0.32
UBASH3B-207ENST00000530917 PARD3BQ8TEW8 1205 aa13.06□□□□□ -0.32
UBASH3B-207ENST00000530917 CCDC51Q96ER9 411 aa13.06□□□□□ -0.32
UBASH3B-207ENST00000530917 ERGIC2Q96RQ1 377 aa13.06□□□□□ -0.32
UBASH3B-207ENST00000530917 C11orf49Q9H6J7 331 aa13.06□□□□□ -0.32
UBASH3B-207ENST00000530917 CHST12Q9NRB3 414 aa13.06□□□□□ -0.32
UBASH3B-207ENST00000530917 CPSF3Q9UKF6 684 aaKnown RBP13.06□□□□□ -0.32
UBASH3B-207ENST00000530917 ST3GAL5Q9UNP4 418 aa13.06□□□□□ -0.32
UBASH3B-207ENST00000530917 BRCA2P51587 3418 aa13.06□□□□□ -0.32
UBASH3B-207ENST00000530917 ITIH6Q6UXX5 1313 aa13.06□□□□□ -0.32
UBASH3B-207ENST00000530917 SCN5AQ14524 2016 aa13.05□□□□□ -0.32
UBASH3B-207ENST00000530917 GTPBP10A4D1E9 387 aaKnown RBP13.05□□□□□ -0.32
UBASH3B-207ENST00000530917 DCDC2CA8MYV0 355 aa13.05□□□□□ -0.32
UBASH3B-207ENST00000530917 PMM2O15305 246 aa13.05□□□□□ -0.32
UBASH3B-207ENST00000530917 STX10O60499 249 aa13.05□□□□□ -0.32
UBASH3B-207ENST00000530917 CLTAP09496 248 aa13.05□□□□□ -0.32
UBASH3B-207ENST00000530917 HARSP12081 509 aaKnown RBP13.05□□□□□ -0.32
UBASH3B-207ENST00000530917 GTF2H1P32780 548 aa13.05□□□□□ -0.32
UBASH3B-207ENST00000530917 ATN1P54259 1190 aaPredicted RBP13.05□□□□□ -0.32
UBASH3B-207ENST00000530917 CLDN10P78369 228 aa13.05□□□□□ -0.32
UBASH3B-207ENST00000530917 LPIN1Q14693 890 aa13.05□□□□□ -0.32
UBASH3B-207ENST00000530917 SURF1Q15526 300 aa13.05□□□□□ -0.32
UBASH3B-207ENST00000530917 DCAF17Q5H9S7 520 aaPredicted RBP13.05□□□□□ -0.32
UBASH3B-207ENST00000530917 ZBTB41Q5SVQ8 909 aa13.05□□□□□ -0.32
UBASH3B-207ENST00000530917 C1orf220Q5T0J3 134 aa13.05□□□□□ -0.32
UBASH3B-207ENST00000530917 SPECC1LQ69YQ0 1117 aa13.05□□□□□ -0.32
UBASH3B-207ENST00000530917 TRAF7Q6Q0C0 670 aa13.05□□□□□ -0.32
UBASH3B-207ENST00000530917 CDR2LQ86X02 465 aaPredicted RBP13.05□□□□□ -0.32
UBASH3B-207ENST00000530917 THNSL1Q8IYQ7 743 aa13.05□□□□□ -0.32
UBASH3B-207ENST00000530917 PLEKHO2Q8TD55 490 aa13.05□□□□□ -0.32
UBASH3B-207ENST00000530917 DIS3LQ8TF46 1054 aaKnown RBP13.05□□□□□ -0.32
UBASH3B-207ENST00000530917 PAWRQ96IZ0 340 aaKnown RBP13.05□□□□□ -0.32
UBASH3B-207ENST00000530917 ERVK-5Q9HDB9 667 aa13.05□□□□□ -0.32
UBASH3B-207ENST00000530917 RBAKQ9NYW8 714 aaPredicted RBP13.05□□□□□ -0.32
UBASH3B-207ENST00000530917 IMPACTQ9P2X3 320 aa13.05□□□□□ -0.32
UBASH3B-207ENST00000530917 TANC1Q9C0D5 1861 aa13.04□□□□□ -0.32
UBASH3B-207ENST00000530917 PITPNM1O00562 1244 aa13.04□□□□□ -0.32
UBASH3B-207ENST00000530917 P4HA2O15460 535 aa13.04□□□□□ -0.32
UBASH3B-207ENST00000530917 PQBP1O60828 265 aaKnown RBP13.04□□□□□ -0.32
UBASH3B-207ENST00000530917 N4BP1O75113 896 aaKnown RBP13.04□□□□□ -0.32
UBASH3B-207ENST00000530917 SELPP16109 830 aa13.04□□□□□ -0.32
UBASH3B-207ENST00000530917 TNFSF9P41273 254 aa13.04□□□□□ -0.32
UBASH3B-207ENST00000530917 FMO5P49326 533 aa13.04□□□□□ -0.32
UBASH3B-207ENST00000530917 DLG4P78352 724 aa13.04□□□□□ -0.32
UBASH3B-207ENST00000530917 KCNMA1Q12791 1236 aa13.04□□□□□ -0.32
UBASH3B-207ENST00000530917 SEZ6Q53EL9 994 aa13.04□□□□□ -0.32
UBASH3B-207ENST00000530917 FAM43BQ6ZT52 329 aaPredicted RBP13.04□□□□□ -0.32
UBASH3B-207ENST00000530917 TMC6Q7Z403 805 aa13.04□□□□□ -0.32
UBASH3B-207ENST00000530917 NECAB2Q7Z6G3 386 aa13.04□□□□□ -0.32
UBASH3B-207ENST00000530917 BRSK2Q8IWQ3 736 aa13.04□□□□□ -0.32
UBASH3B-207ENST00000530917 SPC24Q8NBT2 197 aa13.04□□□□□ -0.32
UBASH3B-207ENST00000530917 CCDC127Q96BQ5 260 aa13.04□□□□□ -0.32
UBASH3B-207ENST00000530917 AGO3Q9H9G7 860 aaKnown RBP13.04□□□□□ -0.32
UBASH3B-207ENST00000530917 RPF1Q9H9Y2 349 aaKnown RBP13.04□□□□□ -0.32
UBASH3B-207ENST00000530917 PADI3Q9ULW8 664 aa13.04□□□□□ -0.32
UBASH3B-207ENST00000530917 PIN4Q9Y237 131 aaKnown RBP13.04□□□□□ -0.32
UBASH3B-207ENST00000530917 TET1Q8NFU7 2136 aa13.04□□□□□ -0.32
UBASH3B-207ENST00000530917 LRRIQ3A6PVS8 624 aaPredicted RBP13.03□□□□□ -0.32
UBASH3B-207ENST00000530917 GOLGA6L6A8MZA4 724 aa13.03□□□□□ -0.32
UBASH3B-207ENST00000530917 IL18RAPO95256 599 aa13.03□□□□□ -0.32
UBASH3B-207ENST00000530917 NPTXRO95502 500 aa13.03□□□□□ -0.32
UBASH3B-207ENST00000530917 TRIM49P0CI25 452 aa13.03□□□□□ -0.32
UBASH3B-207ENST00000530917 TRIM49CP0CI26 452 aa13.03□□□□□ -0.32
UBASH3B-207ENST00000530917 STAG3L1P0CL83 205 aa13.03□□□□□ -0.32
UBASH3B-207ENST00000530917 GHRP10912 638 aa13.03□□□□□ -0.32
UBASH3B-207ENST00000530917 CD52P31358 61 aa13.03□□□□□ -0.32
UBASH3B-207ENST00000530917 GRM5P41594 1212 aa13.03□□□□□ -0.32
UBASH3B-207ENST00000530917 TLE2Q04725 743 aa13.03□□□□□ -0.32
UBASH3B-207ENST00000530917 PPP3CAQ08209 521 aa13.03□□□□□ -0.32
UBASH3B-207ENST00000530917 FAAP100Q0VG06 881 aa13.03□□□□□ -0.32
UBASH3B-207ENST00000530917 NFX1Q12986 1120 aaKnown RBP13.03□□□□□ -0.32
UBASH3B-207ENST00000530917 PAK2Q13177 524 aa13.03□□□□□ -0.32
UBASH3B-207ENST00000530917 TBX2Q13207 712 aaPredicted RBP13.03□□□□□ -0.32
UBASH3B-207ENST00000530917 SYCP1Q15431 976 aa13.03□□□□□ -0.32
UBASH3B-207ENST00000530917 ENOX2Q16206 610 aaKnown RBP13.03□□□□□ -0.32
UBASH3B-207ENST00000530917 TRIM60Q495X7 471 aa13.03□□□□□ -0.32
UBASH3B-207ENST00000530917 UBXN11Q5T124 520 aa13.03□□□□□ -0.32
UBASH3B-207ENST00000530917 LRRC8DQ7L1W4 858 aa13.03□□□□□ -0.32
UBASH3B-207ENST00000530917 CEP120Q8N960 986 aa13.03□□□□□ -0.32
UBASH3B-207ENST00000530917 ACAP3Q96P50 834 aa13.03□□□□□ -0.32
UBASH3B-207ENST00000530917 FNBP1Q96RU3 617 aa13.03□□□□□ -0.32
UBASH3B-207ENST00000530917 NUP58Q9BVL2 599 aa13.03□□□□□ -0.32
UBASH3B-207ENST00000530917 OSBPL7Q9BZF2 842 aa13.03□□□□□ -0.32
UBASH3B-207ENST00000530917 PDE11AQ9HCR9 933 aa13.03□□□□□ -0.32
UBASH3B-207ENST00000530917 SIK3Q9Y2K2 1263 aa13.03□□□□□ -0.32
UBASH3B-207ENST00000530917 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.03□□□□□ -0.32
UBASH3B-207ENST00000530917 A0A0C4DFX4 3053 aa13.03□□□□□ -0.32
UBASH3B-207ENST00000530917 SZT2Q5T011 3432 aa13.02□□□□□ -0.32
UBASH3B-207ENST00000530917 PARNO95453 639 aaKnown RBP13.02□□□□□ -0.33
UBASH3B-207ENST00000530917 DLATP10515 647 aaKnown RBP13.02□□□□□ -0.33
UBASH3B-207ENST00000530917 ZSCAN20P17040 1043 aaPredicted RBP13.02□□□□□ -0.33
UBASH3B-207ENST00000530917 AP3M2P53677 418 aa13.02□□□□□ -0.33
UBASH3B-207ENST00000530917 WNT7BP56706 349 aa13.02□□□□□ -0.33
UBASH3B-207ENST00000530917 OSTNP61366 133 aa13.02□□□□□ -0.33
UBASH3B-207ENST00000530917 DSC3Q14574 896 aa13.02□□□□□ -0.33
UBASH3B-207ENST00000530917 MBTPS1Q14703 1052 aa13.02□□□□□ -0.33
UBASH3B-207ENST00000530917 PTPN21Q16825 1174 aa13.02□□□□□ -0.33
UBASH3B-207ENST00000530917 SLC10A6Q3KNW5 377 aa13.02□□□□□ -0.33
UBASH3B-207ENST00000530917 CBWD6Q4V339 395 aa13.02□□□□□ -0.33
UBASH3B-207ENST00000530917 CBWD3Q5JTY5 395 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms