RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 ARHGAP28Q9P2N2 729 aa18.5■□□□□ 0.55
BRCA2-204ENST00000530893 NR2E1Q9Y466 385 aa18.5■□□□□ 0.55
BRCA2-204ENST00000530893 MYPNQ86TC9 1320 aa18.5■□□□□ 0.55
BRCA2-204ENST00000530893 SPATA31C2B4DYI2 1134 aa18.5■□□□□ 0.55
BRCA2-204ENST00000530893 MYO1CO00159 1063 aa18.5■□□□□ 0.55
BRCA2-204ENST00000530893 PODXLO00592 558 aa18.5■□□□□ 0.55
BRCA2-204ENST00000530893 PHF2O75151 1096 aa18.5■□□□□ 0.55
BRCA2-204ENST00000530893 MMEP08473 750 aa18.5■□□□□ 0.55
BRCA2-204ENST00000530893 COMTP21964 271 aa18.5■□□□□ 0.55
BRCA2-204ENST00000530893 CTNNA2P26232 953 aa18.5■□□□□ 0.55
BRCA2-204ENST00000530893 TBC1D10BQ4KMP7 808 aaPredicted RBP18.5■□□□□ 0.55
BRCA2-204ENST00000530893 XKR3Q5GH77 459 aa18.5■□□□□ 0.55
BRCA2-204ENST00000530893 MIS18BP1Q6P0N0 1132 aa18.5■□□□□ 0.55
BRCA2-204ENST00000530893 ABHD15Q6UXT9 468 aa18.5■□□□□ 0.55
BRCA2-204ENST00000530893 SH2D3CQ8N5H7 860 aa18.5■□□□□ 0.55
BRCA2-204ENST00000530893 ZNF564Q8TBZ8 553 aaPredicted RBP18.5■□□□□ 0.55
BRCA2-204ENST00000530893 TAS1R2Q8TE23 839 aa18.5■□□□□ 0.55
BRCA2-204ENST00000530893 WRNIP1Q96S55 665 aa18.5■□□□□ 0.55
BRCA2-204ENST00000530893 FMO2Q99518 471 aa18.5■□□□□ 0.55
BRCA2-204ENST00000530893 CYP39A1Q9NYL5 469 aa18.5■□□□□ 0.55
BRCA2-204ENST00000530893 PCYOX1Q9UHG3 505 aa18.5■□□□□ 0.55
BRCA2-204ENST00000530893 TRPC6Q9Y210 931 aa18.5■□□□□ 0.55
BRCA2-204ENST00000530893 PPFIA2O75334 1257 aa18.49■□□□□ 0.55
BRCA2-204ENST00000530893 EIF3BP55884 814 aaKnown RBP18.49■□□□□ 0.55
BRCA2-204ENST00000530893 CLDN10P78369 228 aa18.49■□□□□ 0.55
BRCA2-204ENST00000530893 XPNPEP1Q9NQW7 623 aa18.49■□□□□ 0.55
BRCA2-204ENST00000530893 TMOD4Q9NZQ9 345 aa18.49■□□□□ 0.55
BRCA2-204ENST00000530893 HMGCS2P54868 508 aa18.49■□□□□ 0.55
BRCA2-204ENST00000530893 ACTR2P61160 394 aa18.49■□□□□ 0.55
BRCA2-204ENST00000530893 PRKCEQ02156 737 aa18.49■□□□□ 0.55
BRCA2-204ENST00000530893 ZNF844Q08AG5 666 aa18.49■□□□□ 0.55
BRCA2-204ENST00000530893 ZNF211Q13398 564 aaPredicted RBP18.49■□□□□ 0.55
BRCA2-204ENST00000530893 MESDQ14696 234 aa18.49■□□□□ 0.55
BRCA2-204ENST00000530893 TMEM132BQ14DG7 1078 aa18.49■□□□□ 0.55
BRCA2-204ENST00000530893 AGBL2Q5U5Z8 902 aa18.49■□□□□ 0.55
BRCA2-204ENST00000530893 NAA35Q5VZE5 725 aa18.49■□□□□ 0.55
BRCA2-204ENST00000530893 ACAD10Q6JQN1 1059 aa18.49■□□□□ 0.55
BRCA2-204ENST00000530893 CATSPERGQ6ZRH7 1159 aa18.49■□□□□ 0.55
BRCA2-204ENST00000530893 ZNF677Q86XU0 584 aa18.49■□□□□ 0.55
BRCA2-204ENST00000530893 ATP8B4Q8TF62 1192 aa18.49■□□□□ 0.55
BRCA2-204ENST00000530893 DDX1Q92499 740 aaKnown RBP18.49■□□□□ 0.55
BRCA2-204ENST00000530893 ZKSCAN4Q969J2 545 aaPredicted RBP18.49■□□□□ 0.55
BRCA2-204ENST00000530893 NUP85Q9BW27 656 aa18.49■□□□□ 0.55
BRCA2-204ENST00000530893 ERVK-5Q9HDB9 667 aa18.49■□□□□ 0.55
BRCA2-204ENST00000530893 PARP2Q9UGN5 583 aa18.49■□□□□ 0.55
BRCA2-204ENST00000530893 SEPT9Q9UHD8 586 aaPredicted RBP18.49■□□□□ 0.55
BRCA2-204ENST00000530893 PCDHA3Q9Y5H8 950 aa18.49■□□□□ 0.55
BRCA2-204ENST00000530893 ADGRA3Q8IWK6 1321 aa18.49■□□□□ 0.55
BRCA2-204ENST00000530893 LOC285556D6RIA3 1793 aa18.48■□□□□ 0.55
BRCA2-204ENST00000530893 FZD9O00144 591 aa18.48■□□□□ 0.55
BRCA2-204ENST00000530893 EBAG9O00559 213 aa18.48■□□□□ 0.55
BRCA2-204ENST00000530893 EXTL3O43909 919 aa18.48■□□□□ 0.55
BRCA2-204ENST00000530893 C15orf39Q6ZRI6 1047 aa18.48■□□□□ 0.55
BRCA2-204ENST00000530893 JAMLQ86YT9 394 aa18.48■□□□□ 0.55
BRCA2-204ENST00000530893 CCDC60Q8IWA6 550 aaPredicted RBP18.48■□□□□ 0.55
BRCA2-204ENST00000530893 UBLCP1Q8WVY7 318 aaPredicted RBP18.48■□□□□ 0.55
BRCA2-204ENST00000530893 KRT35Q92764 455 aa18.48■□□□□ 0.55
BRCA2-204ENST00000530893 ZNF653Q96CK0 615 aa18.48■□□□□ 0.55
BRCA2-204ENST00000530893 BICD1Q96G01 975 aa18.48■□□□□ 0.55
BRCA2-204ENST00000530893 POP1Q99575 1024 aaKnown RBP18.48■□□□□ 0.55
BRCA2-204ENST00000530893 PLVAPQ9BX97 442 aa18.48■□□□□ 0.55
BRCA2-204ENST00000530893 TXLNGYQ9BZA5 131 aa18.48■□□□□ 0.55
BRCA2-204ENST00000530893 DPH5Q9H2P9 285 aa18.48■□□□□ 0.55
BRCA2-204ENST00000530893 HOXC10Q9NYD6 342 aa18.48■□□□□ 0.55
BRCA2-204ENST00000530893 MTUS1Q9ULD2 1270 aa18.48■□□□□ 0.55
BRCA2-204ENST00000530893 DHX9Q08211 1270 aaKnown RBP18.47■□□□□ 0.55
BRCA2-204ENST00000530893 CYP1B1Q16678 543 aa18.47■□□□□ 0.55
BRCA2-204ENST00000530893 DHX38Q92620 1227 aaKnown RBP18.47■□□□□ 0.55
BRCA2-204ENST00000530893 TRIM51Q9BSJ1 452 aa18.47■□□□□ 0.55
BRCA2-204ENST00000530893 FAM129AQ9BZQ8 928 aa18.47■□□□□ 0.55
BRCA2-204ENST00000530893 A1CFQ9NQ94 594 aaKnown RBP18.47■□□□□ 0.55
BRCA2-204ENST00000530893 C1orf112Q9NSG2 853 aa18.47■□□□□ 0.55
BRCA2-204ENST00000530893 ZDHHC18Q9NUE0 388 aa18.47■□□□□ 0.55
BRCA2-204ENST00000530893 STYXL1Q9Y6J8 313 aa18.47■□□□□ 0.55
BRCA2-204ENST00000530893 SPOPO43791 374 aa18.47■□□□□ 0.55
BRCA2-204ENST00000530893 SUPT20HL2P0C7V6 817 aa18.47■□□□□ 0.55
BRCA2-204ENST00000530893 DLATP10515 647 aaKnown RBP18.47■□□□□ 0.55
BRCA2-204ENST00000530893 ICAM3P32942 547 aa18.47■□□□□ 0.55
BRCA2-204ENST00000530893 FLT3P36888 993 aa18.47■□□□□ 0.55
BRCA2-204ENST00000530893 BPIFB4P59827 614 aa18.47■□□□□ 0.55
BRCA2-204ENST00000530893 PDCLQ13371 301 aa18.47■□□□□ 0.55
BRCA2-204ENST00000530893 SUPT20HL1Q3ZLR7 823 aa18.47■□□□□ 0.55
BRCA2-204ENST00000530893 PRELID2Q8N945 189 aa18.47■□□□□ 0.55
BRCA2-204ENST00000530893 PROCA1Q8NCQ7 364 aaPredicted RBP18.47■□□□□ 0.55
BRCA2-204ENST00000530893 DNERQ8NFT8 737 aa18.47■□□□□ 0.55
BRCA2-204ENST00000530893 TRIM11Q96F44 468 aa18.47■□□□□ 0.55
BRCA2-204ENST00000530893 POLR3FQ9H1D9 316 aaPredicted RBP18.47■□□□□ 0.55
BRCA2-204ENST00000530893 MYH9P35579 1960 aaKnown RBP18.47■□□□□ 0.55
BRCA2-204ENST00000530893 ZNFX1Q9P2E3 1918 aaKnown RBP18.46■□□□□ 0.55
BRCA2-204ENST00000530893 GRIN3BO60391 1043 aa18.46■□□□□ 0.55
BRCA2-204ENST00000530893 MYBL1P10243 752 aa18.46■□□□□ 0.55
BRCA2-204ENST00000530893 MDH1P40925 334 aaKnown RBP18.46■□□□□ 0.55
BRCA2-204ENST00000530893 LIG4P49917 911 aa18.46■□□□□ 0.55
BRCA2-204ENST00000530893 ATP1A2P50993 1020 aa18.46■□□□□ 0.55
BRCA2-204ENST00000530893 RWDD2BP57060 319 aa18.46■□□□□ 0.55
BRCA2-204ENST00000530893 PSMD6Q15008 389 aa18.46■□□□□ 0.55
BRCA2-204ENST00000530893 CLEC16AQ2KHT3 1053 aa18.46■□□□□ 0.55
BRCA2-204ENST00000530893 FAM213AQ9BRX8 229 aa18.46■□□□□ 0.55
BRCA2-204ENST00000530893 TOPORSQ9NS56 1045 aaPredicted RBP18.46■□□□□ 0.55
BRCA2-204ENST00000530893 LCMT1Q9UIC8 334 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms