RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 TUSC3Q13454 348 aa16.54■□□□□ 0.24
CAPN1-219ENST00000530495 HTR4Q13639 388 aa16.54■□□□□ 0.24
CAPN1-219ENST00000530495 HSP90AA2PQ14568 343 aaPredicted RBP16.54■□□□□ 0.24
CAPN1-219ENST00000530495 ANKRD1Q15327 319 aa16.54■□□□□ 0.24
CAPN1-219ENST00000530495 PPP4R3CPQ6ZMV5 832 aa16.54■□□□□ 0.24
CAPN1-219ENST00000530495 GLYCTKQ8IVS8 523 aa16.54■□□□□ 0.24
CAPN1-219ENST00000530495 GPR152Q8TDT2 470 aa16.54■□□□□ 0.24
CAPN1-219ENST00000530495 PRIMPOLQ96LW4 560 aa16.54■□□□□ 0.24
CAPN1-219ENST00000530495 CCDC43Q96MW1 224 aaKnown RBP16.54■□□□□ 0.24
CAPN1-219ENST00000530495 PAAF1Q9BRP4 392 aa16.54■□□□□ 0.24
CAPN1-219ENST00000530495 POLR3FQ9H1D9 316 aaPredicted RBP16.54■□□□□ 0.24
CAPN1-219ENST00000530495 FZD8Q9H461 694 aa16.54■□□□□ 0.24
CAPN1-219ENST00000530495 TBC1D17Q9HA65 648 aa16.54■□□□□ 0.24
CAPN1-219ENST00000530495 SLC2A4RGQ9NR83 387 aa16.54■□□□□ 0.24
CAPN1-219ENST00000530495 SF3B1O75533 1304 aaKnown RBP eCLIP16.53■□□□□ 0.247e-6■■■■■ 28.7
CAPN1-219ENST00000530495 A0A087WWV3 80 aa16.53■□□□□ 0.24
CAPN1-219ENST00000530495 SPATA31C1P0DKV0 1188 aa16.53■□□□□ 0.24
CAPN1-219ENST00000530495 FAM187BQ17R55 369 aa16.53■□□□□ 0.24
CAPN1-219ENST00000530495 RTP2Q5QGT7 225 aa16.53■□□□□ 0.24
CAPN1-219ENST00000530495 PRSS55Q6UWB4 352 aaPredicted RBP16.53■□□□□ 0.24
CAPN1-219ENST00000530495 GET4Q7L5D6 327 aaPredicted RBP16.53■□□□□ 0.24
CAPN1-219ENST00000530495 ERMP1Q7Z2K6 904 aa16.53■□□□□ 0.24
CAPN1-219ENST00000530495 CLSTN3Q9BQT9 956 aa16.53■□□□□ 0.24
CAPN1-219ENST00000530495 PRMT7Q9NVM4 692 aaPredicted RBP16.53■□□□□ 0.24
CAPN1-219ENST00000530495 DLGAP2Q9P1A6 1054 aa16.53■□□□□ 0.24
CAPN1-219ENST00000530495 CACNG4Q9UBN1 327 aa16.53■□□□□ 0.24
CAPN1-219ENST00000530495 SIT1Q9Y3P8 196 aa16.53■□□□□ 0.24
CAPN1-219ENST00000530495 DOCK6Q96HP0 2047 aa16.53■□□□□ 0.24
CAPN1-219ENST00000530495 LRRIQ4A6NIV6 560 aa16.52■□□□□ 0.24
CAPN1-219ENST00000530495 BTBD18B2RXH4 712 aa16.52■□□□□ 0.24
CAPN1-219ENST00000530495 NEMFO60524 1076 aa16.52■□□□□ 0.24
CAPN1-219ENST00000530495 HNRNPA1P09651 372 aaKnown RBP eCLIP16.52■□□□□ 0.24
CAPN1-219ENST00000530495 RFX1P22670 979 aa16.52■□□□□ 0.24
CAPN1-219ENST00000530495 FSHRP23945 695 aa16.52■□□□□ 0.24
CAPN1-219ENST00000530495 MCPH1Q8NEM0 835 aa16.52■□□□□ 0.24
CAPN1-219ENST00000530495 LNX1Q8TBB1 728 aaPredicted RBP16.52■□□□□ 0.24
CAPN1-219ENST00000530495 PIK3R5Q8WYR1 880 aa16.52■□□□□ 0.24
CAPN1-219ENST00000530495 TTPALQ9BTX7 342 aa16.52■□□□□ 0.24
CAPN1-219ENST00000530495 GPRC5CQ9NQ84 441 aa16.52■□□□□ 0.24
CAPN1-219ENST00000530495 ARHGEF3Q9NR81 526 aa16.52■□□□□ 0.24
CAPN1-219ENST00000530495 FBXW11Q9UKB1 542 aa16.52■□□□□ 0.24
CAPN1-219ENST00000530495 NUMBLQ9Y6R0 609 aa16.52■□□□□ 0.24
CAPN1-219ENST00000530495 TTLL13PA6NNM8 815 aa16.51■□□□□ 0.23
CAPN1-219ENST00000530495 WNT7AO00755 349 aa16.51■□□□□ 0.23
CAPN1-219ENST00000530495 PTGESO14684 152 aa16.51■□□□□ 0.23
CAPN1-219ENST00000530495 USO1O60763 962 aaKnown RBP16.51■□□□□ 0.23
CAPN1-219ENST00000530495 LMNAP02545 664 aaKnown RBP16.51■□□□□ 0.23
CAPN1-219ENST00000530495 THP07101 528 aa16.51■□□□□ 0.23
CAPN1-219ENST00000530495 ID4P47928 161 aa16.51■□□□□ 0.23
CAPN1-219ENST00000530495 ANAPC15P60006 121 aa16.51■□□□□ 0.23
CAPN1-219ENST00000530495 FAM171A1Q5VUB5 890 aa16.51■□□□□ 0.23
CAPN1-219ENST00000530495 CDCA2Q69YH5 1023 aaPredicted RBP16.51■□□□□ 0.23
CAPN1-219ENST00000530495 DCLRE1AQ6PJP8 1040 aa16.51■□□□□ 0.23
CAPN1-219ENST00000530495 MAEAQ7L5Y9 396 aa16.51■□□□□ 0.23
CAPN1-219ENST00000530495 GRASPQ7Z6J2 395 aaPredicted RBP16.51■□□□□ 0.23
CAPN1-219ENST00000530495 CATSPER3Q86XQ3 398 aa16.51■□□□□ 0.23
CAPN1-219ENST00000530495 NECAB1Q8N987 351 aa16.51■□□□□ 0.23
CAPN1-219ENST00000530495 RPP25Q9BUL9 199 aaKnown RBP16.51■□□□□ 0.23
CAPN1-219ENST00000530495 TUFT1Q9NNX1 390 aa16.51■□□□□ 0.23
CAPN1-219ENST00000530495 CDH7Q9ULB5 785 aa16.51■□□□□ 0.23
CAPN1-219ENST00000530495 CASTOR2A6NHX0 329 aa16.5■□□□□ 0.23
CAPN1-219ENST00000530495 POTEMA6NI47 508 aa16.5■□□□□ 0.23
CAPN1-219ENST00000530495 N4BP3O15049 544 aa16.5■□□□□ 0.23
CAPN1-219ENST00000530495 KIF4AO95239 1232 aa16.5■□□□□ 0.23
CAPN1-219ENST00000530495 DCNP07585 359 aaKnown RBP16.5■□□□□ 0.23
CAPN1-219ENST00000530495 ATP2B1P20020 1258 aa16.5■□□□□ 0.23
CAPN1-219ENST00000530495 HOXA9P31269 272 aa16.5■□□□□ 0.23
CAPN1-219ENST00000530495 STARD6P59095 220 aa16.5■□□□□ 0.23
CAPN1-219ENST00000530495 NAB2Q15742 525 aa16.5■□□□□ 0.23
CAPN1-219ENST00000530495 PSMD5Q16401 504 aa16.5■□□□□ 0.23
CAPN1-219ENST00000530495 ME3Q16798 604 aa16.5■□□□□ 0.23
CAPN1-219ENST00000530495 SPECC1Q5M775 1068 aa16.5■□□□□ 0.23
CAPN1-219ENST00000530495 CEP57Q86XR8 500 aa16.5■□□□□ 0.23
CAPN1-219ENST00000530495 ZBTB8OSQ8IWT0 167 aa16.5■□□□□ 0.23
CAPN1-219ENST00000530495 DIS3L2Q8IYB7 885 aaKnown RBP16.5■□□□□ 0.23
CAPN1-219ENST00000530495 KCNG4Q8TDN1 519 aa16.5■□□□□ 0.23
CAPN1-219ENST00000530495 HASPINQ8TF76 798 aa16.5■□□□□ 0.23
CAPN1-219ENST00000530495 FGF14Q92915 247 aa16.5■□□□□ 0.23
CAPN1-219ENST00000530495 NACC1Q96RE7 527 aa16.5■□□□□ 0.23
CAPN1-219ENST00000530495 C2orf40Q9H1Z8 148 aa16.5■□□□□ 0.23
CAPN1-219ENST00000530495 CXCL16Q9H2A7 254 aa16.5■□□□□ 0.23
CAPN1-219ENST00000530495 PDZD7Q9H5P4 517 aa16.5■□□□□ 0.23
CAPN1-219ENST00000530495 SNTG2Q9NY99 539 aa16.5■□□□□ 0.23
CAPN1-219ENST00000530495 DAXXQ9UER7 740 aaPredicted RBP16.5■□□□□ 0.23
CAPN1-219ENST00000530495 MYH15Q9Y2K3 1946 aa16.5■□□□□ 0.23
CAPN1-219ENST00000530495 ZNF292O60281 2723 aa16.49■□□□□ 0.23
CAPN1-219ENST00000530495 WDR87Q6ZQQ6 2873 aa16.49■□□□□ 0.23
CAPN1-219ENST00000530495 GPC5P78333 572 aa16.49■□□□□ 0.23
CAPN1-219ENST00000530495 NTHL1P78549 312 aa16.49■□□□□ 0.23
CAPN1-219ENST00000530495 ELAVL2Q12926 359 aaKnown RBP16.49■□□□□ 0.23
CAPN1-219ENST00000530495 PRPF4BQ13523 1007 aaKnown RBP16.49■□□□□ 0.23
CAPN1-219ENST00000530495 PPM1LQ5SGD2 360 aa16.49■□□□□ 0.23
CAPN1-219ENST00000530495 LIN9Q5TKA1 542 aa16.49■□□□□ 0.23
CAPN1-219ENST00000530495 PDXDC1Q6P996 788 aa16.49■□□□□ 0.23
CAPN1-219ENST00000530495 PARM1Q6UWI2 310 aa16.49■□□□□ 0.23
CAPN1-219ENST00000530495 C1orf210Q8IVY1 113 aa16.49■□□□□ 0.23
CAPN1-219ENST00000530495 FANCMQ8IYD8 2048 aa16.49■□□□□ 0.23
CAPN1-219ENST00000530495 NSUN7Q8NE18 718 aaKnown RBP16.49■□□□□ 0.23
CAPN1-219ENST00000530495 ST13P5Q8NFI4 369 aaPredicted RBP16.49■□□□□ 0.23
CAPN1-219ENST00000530495 GTF3C6Q969F1 213 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms