RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 NTHL1P78549 312 aa11.61□□□□□ -0.55
COPB1-207ENST00000529866 ADCY1Q08828 1119 aa11.61□□□□□ -0.55
COPB1-207ENST00000529866 DMWDQ09019 674 aa11.61□□□□□ -0.55
COPB1-207ENST00000529866 TFDP1Q14186 410 aa11.61□□□□□ -0.55
COPB1-207ENST00000529866 EMC2Q15006 297 aa11.61□□□□□ -0.55
COPB1-207ENST00000529866 PPM1JQ5JR12 505 aa11.61□□□□□ -0.55
COPB1-207ENST00000529866 LAIR1Q6GTX8 287 aa11.61□□□□□ -0.55
COPB1-207ENST00000529866 PDXDC1Q6P996 788 aa11.61□□□□□ -0.55
COPB1-207ENST00000529866 TSSK4Q6SA08 328 aa11.61□□□□□ -0.55
COPB1-207ENST00000529866 MOXD1Q6UVY6 613 aa11.61□□□□□ -0.55
COPB1-207ENST00000529866 FERMT3Q86UX7 667 aa11.61□□□□□ -0.55
COPB1-207ENST00000529866 ETNPPLQ8TBG4 499 aa11.61□□□□□ -0.55
COPB1-207ENST00000529866 KXD1Q9BQD3 176 aa11.61□□□□□ -0.55
COPB1-207ENST00000529866 TTPALQ9BTX7 342 aa11.61□□□□□ -0.55
COPB1-207ENST00000529866 RNF26Q9BY78 433 aaPredicted RBP11.61□□□□□ -0.55
COPB1-207ENST00000529866 RNF39Q9H2S5 420 aa11.61□□□□□ -0.55
COPB1-207ENST00000529866 VPS54Q9P1Q0 977 aa11.61□□□□□ -0.55
COPB1-207ENST00000529866 HES2Q9Y543 173 aa11.61□□□□□ -0.55
COPB1-207ENST00000529866 CNOT1A5YKK6 2376 aaKnown RBP11.61□□□□□ -0.55
COPB1-207ENST00000529866 CYP3A7-CYP3A51PA0A087WV96 503 aa11.6□□□□□ -0.55
COPB1-207ENST00000529866 INO80B-WBP1J3KQ70 363 aa11.6□□□□□ -0.55
COPB1-207ENST00000529866 CCL16O15467 120 aa11.6□□□□□ -0.55
COPB1-207ENST00000529866 FOXD2O60548 495 aaPredicted RBP11.6□□□□□ -0.55
COPB1-207ENST00000529866 CDC45O75419 566 aa11.6□□□□□ -0.55
COPB1-207ENST00000529866 ECI2O75521 394 aa11.6□□□□□ -0.55
COPB1-207ENST00000529866 TDP2O95551 362 aa11.6□□□□□ -0.55
COPB1-207ENST00000529866 P4HBP07237 508 aaKnown RBP11.6□□□□□ -0.55
COPB1-207ENST00000529866 RETP07949 1114 aa11.6□□□□□ -0.55
COPB1-207ENST00000529866 TGM1P22735 817 aa11.6□□□□□ -0.55
COPB1-207ENST00000529866 CYP3A7P24462 503 aa11.6□□□□□ -0.55
COPB1-207ENST00000529866 SPEM2Q0P670 501 aa11.6□□□□□ -0.55
COPB1-207ENST00000529866 ELAVL2Q12926 359 aaKnown RBP11.6□□□□□ -0.55
COPB1-207ENST00000529866 HSP90AA2PQ14568 343 aaPredicted RBP11.6□□□□□ -0.55
COPB1-207ENST00000529866 MXD4Q14582 209 aaPredicted RBP11.6□□□□□ -0.55
COPB1-207ENST00000529866 PSMD5Q16401 504 aa11.6□□□□□ -0.55
COPB1-207ENST00000529866 PABPC1LQ4VXU2 614 aaKnown RBP11.6□□□□□ -0.55
COPB1-207ENST00000529866 RTP2Q5QGT7 225 aa11.6□□□□□ -0.55
COPB1-207ENST00000529866 PRSS55Q6UWB4 352 aaPredicted RBP11.6□□□□□ -0.55
COPB1-207ENST00000529866 RTL10Q7L3V2 364 aa11.6□□□□□ -0.55
COPB1-207ENST00000529866 OTUD6AQ7L8S5 288 aa11.6□□□□□ -0.55
COPB1-207ENST00000529866 NPAS3Q8IXF0 933 aa11.6□□□□□ -0.55
COPB1-207ENST00000529866 CELF5Q8N6W0 485 aaKnown RBP11.6□□□□□ -0.55
COPB1-207ENST00000529866 ITFG1Q8TB96 612 aa11.6□□□□□ -0.55
COPB1-207ENST00000529866 SLC7A14Q8TBB6 771 aa11.6□□□□□ -0.55
COPB1-207ENST00000529866 PIK3R5Q8WYR1 880 aa11.6□□□□□ -0.55
COPB1-207ENST00000529866 DDX1Q92499 740 aaKnown RBP11.6□□□□□ -0.55
COPB1-207ENST00000529866 MTRQ99707 1265 aa11.6□□□□□ -0.55
COPB1-207ENST00000529866 SLC26A6Q9BXS9 759 aa11.6□□□□□ -0.55
COPB1-207ENST00000529866 NXF3Q9H4D5 531 aaKnown RBP11.6□□□□□ -0.55
COPB1-207ENST00000529866 PARD6AQ9NPB6 346 aa11.6□□□□□ -0.55
COPB1-207ENST00000529866 SH3GLB2Q9NR46 395 aa11.6□□□□□ -0.55
COPB1-207ENST00000529866 BMP2KQ9NSY1 1161 aaPredicted RBP11.6□□□□□ -0.55
COPB1-207ENST00000529866 GDE1Q9NZC3 331 aa11.6□□□□□ -0.55
COPB1-207ENST00000529866 DDX25Q9UHL0 483 aaKnown RBP11.6□□□□□ -0.55
COPB1-207ENST00000529866 F5P12259 2224 aa11.59□□□□□ -0.55
COPB1-207ENST00000529866 NID2Q14112 1375 aa11.59□□□□□ -0.55
COPB1-207ENST00000529866 MAN2B1O00754 1011 aa11.59□□□□□ -0.55
COPB1-207ENST00000529866 EDIL3O43854 480 aa11.59□□□□□ -0.55
COPB1-207ENST00000529866 YWHABP31946 246 aaKnown RBP11.59□□□□□ -0.55
COPB1-207ENST00000529866 CCR3P51677 355 aa11.59□□□□□ -0.55
COPB1-207ENST00000529866 PTENP60484 403 aa11.59□□□□□ -0.55
COPB1-207ENST00000529866 MTAPQ13126 283 aa11.59□□□□□ -0.55
COPB1-207ENST00000529866 UVSSAQ2YD98 709 aa11.59□□□□□ -0.55
COPB1-207ENST00000529866 TSGA10IPQ3SY00 556 aa11.59□□□□□ -0.55
COPB1-207ENST00000529866 PRR23BQ6ZRT6 265 aa11.59□□□□□ -0.55
COPB1-207ENST00000529866 CEP57Q86XR8 500 aa11.59□□□□□ -0.55
COPB1-207ENST00000529866 DNASE1L2Q92874 299 aa11.59□□□□□ -0.55
COPB1-207ENST00000529866 CPB2Q96IY4 423 aa11.59□□□□□ -0.55
COPB1-207ENST00000529866 CLSTN3Q9BQT9 956 aa11.59□□□□□ -0.55
COPB1-207ENST00000529866 LXNQ9BS40 222 aa11.59□□□□□ -0.55
COPB1-207ENST00000529866 SLKQ9H2G2 1235 aaPredicted RBP11.59□□□□□ -0.55
COPB1-207ENST00000529866 MIOSQ9NXC5 875 aa11.59□□□□□ -0.55
COPB1-207ENST00000529866 PARP2Q9UGN5 583 aa11.59□□□□□ -0.55
COPB1-207ENST00000529866 MRPS23Q9Y3D9 190 aaKnown RBP11.59□□□□□ -0.55
COPB1-207ENST00000529866 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.58□□□□□ -0.56
COPB1-207ENST00000529866 KCNA4P22459 653 aa11.58□□□□□ -0.56
COPB1-207ENST00000529866 AKAP5P24588 427 aa11.58□□□□□ -0.56
COPB1-207ENST00000529866 PPP2R5CQ13362 524 aa11.58□□□□□ -0.56
COPB1-207ENST00000529866 TUSC3Q13454 348 aa11.58□□□□□ -0.56
COPB1-207ENST00000529866 LPAL2Q16609 132 aa11.58□□□□□ -0.56
COPB1-207ENST00000529866 AXDND1Q5T1B0 1012 aaPredicted RBP11.58□□□□□ -0.56
COPB1-207ENST00000529866 FAM171A1Q5VUB5 890 aa11.58□□□□□ -0.56
COPB1-207ENST00000529866 SLC27A1Q6PCB7 646 aa11.58□□□□□ -0.56
COPB1-207ENST00000529866 C4orf19Q8IY42 314 aa11.58□□□□□ -0.56
COPB1-207ENST00000529866 TRIM22Q8IYM9 498 aa11.58□□□□□ -0.56
COPB1-207ENST00000529866 LNX1Q8TBB1 728 aaPredicted RBP11.58□□□□□ -0.56
COPB1-207ENST00000529866 ING5Q8WYH8 240 aa11.58□□□□□ -0.56
COPB1-207ENST00000529866 KCNB2Q92953 911 aa11.58□□□□□ -0.56
COPB1-207ENST00000529866 BRF1Q92994 677 aa11.58□□□□□ -0.56
COPB1-207ENST00000529866 CHRDQ9H2X0 955 aa11.58□□□□□ -0.56
COPB1-207ENST00000529866 HEBP1Q9NRV9 189 aa11.58□□□□□ -0.56
COPB1-207ENST00000529866 PCDHA4Q9UN74 947 aa11.58□□□□□ -0.56
COPB1-207ENST00000529866 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.58□□□□□ -0.56
COPB1-207ENST00000529866 BAHCC1Q9P281 2608 aa11.57□□□□□ -0.56
COPB1-207ENST00000529866 EML1O00423 815 aa11.57□□□□□ -0.56
COPB1-207ENST00000529866 KIF4AO95239 1232 aa11.57□□□□□ -0.56
COPB1-207ENST00000529866 NPTXRO95502 500 aa11.57□□□□□ -0.56
COPB1-207ENST00000529866 IFNAR1P17181 557 aa11.57□□□□□ -0.56
COPB1-207ENST00000529866 ARF4P18085 180 aaPredicted RBP11.57□□□□□ -0.56
COPB1-207ENST00000529866 MBTD1Q05BQ5 628 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms