RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 SLFN14P0C7P3 912 aa13.88□□□□□ -0.19
CCDC90B-216ENST00000529856 PFKFB1P16118 471 aa13.88□□□□□ -0.19
CCDC90B-216ENST00000529856 ZC2HC1CQ53FD0 456 aaPredicted RBP13.88□□□□□ -0.19
CCDC90B-216ENST00000529856 TCEAL5Q5H9L2 206 aa13.88□□□□□ -0.19
CCDC90B-216ENST00000529856 CCDC65Q8IXS2 484 aa13.88□□□□□ -0.19
CCDC90B-216ENST00000529856 CEP120Q8N960 986 aa13.88□□□□□ -0.19
CCDC90B-216ENST00000529856 BICD1Q96G01 975 aa13.88□□□□□ -0.19
CCDC90B-216ENST00000529856 IGSF21Q96ID5 467 aa13.88□□□□□ -0.19
CCDC90B-216ENST00000529856 RPS6KC1Q96S38 1066 aa13.88□□□□□ -0.19
CCDC90B-216ENST00000529856 CCDC94Q9BW85 323 aaPredicted RBP13.88□□□□□ -0.19
CCDC90B-216ENST00000529856 CXCL16Q9H2A7 254 aa13.88□□□□□ -0.19
CCDC90B-216ENST00000529856 MRPL44Q9H9J2 332 aaKnown RBP13.88□□□□□ -0.19
CCDC90B-216ENST00000529856 OLFML3Q9NRN5 406 aa13.88□□□□□ -0.19
CCDC90B-216ENST00000529856 SERTAD1Q9UHV2 236 aa13.88□□□□□ -0.19
CCDC90B-216ENST00000529856 CIZ1Q9ULV3 898 aaPredicted RBP13.88□□□□□ -0.19
CCDC90B-216ENST00000529856 FAN1Q9Y2M0 1017 aa13.88□□□□□ -0.19
CCDC90B-216ENST00000529856 MYO7AQ13402 2215 aa13.88□□□□□ -0.19
CCDC90B-216ENST00000529856 ATG2AQ2TAZ0 1938 aa13.88□□□□□ -0.19
CCDC90B-216ENST00000529856 PTGESO14684 152 aa13.87□□□□□ -0.19
CCDC90B-216ENST00000529856 NRP1O14786 923 aa13.87□□□□□ -0.19
CCDC90B-216ENST00000529856 PPP1R37O75864 691 aa13.87□□□□□ -0.19
CCDC90B-216ENST00000529856 IRS1P35568 1242 aa13.87□□□□□ -0.19
CCDC90B-216ENST00000529856 ANP32AP39687 249 aaKnown RBP13.87□□□□□ -0.19
CCDC90B-216ENST00000529856 LIG4P49917 911 aa13.87□□□□□ -0.19
CCDC90B-216ENST00000529856 ERVFC1P60507 584 aa13.87□□□□□ -0.19
CCDC90B-216ENST00000529856 OSTNP61366 133 aa13.87□□□□□ -0.19
CCDC90B-216ENST00000529856 MCL1Q07820 350 aa13.87□□□□□ -0.19
CCDC90B-216ENST00000529856 GRIK3Q13003 919 aa13.87□□□□□ -0.19
CCDC90B-216ENST00000529856 NOLC1Q14978 699 aaKnown RBP eCLIP13.87□□□□□ -0.19
CCDC90B-216ENST00000529856 PDE12Q6L8Q7 609 aaKnown RBP13.87□□□□□ -0.19
CCDC90B-216ENST00000529856 ALKAL1Q6UXT8 129 aa13.87□□□□□ -0.19
CCDC90B-216ENST00000529856 TMEM173Q86WV6 379 aaPredicted RBP13.87□□□□□ -0.19
CCDC90B-216ENST00000529856 MAP4K3Q8IVH8 894 aa13.87□□□□□ -0.19
CCDC90B-216ENST00000529856 CEP57L1Q8IYX8 460 aa13.87□□□□□ -0.19
CCDC90B-216ENST00000529856 HVCN1Q96D96 273 aa13.87□□□□□ -0.19
CCDC90B-216ENST00000529856 TMEM169Q96HH4 297 aa13.87□□□□□ -0.19
CCDC90B-216ENST00000529856 HAPLN2Q9GZV7 340 aa13.87□□□□□ -0.19
CCDC90B-216ENST00000529856 PRDM6Q9NQX0 595 aa13.87□□□□□ -0.19
CCDC90B-216ENST00000529856 TLR9Q9NR96 1032 aa13.87□□□□□ -0.19
CCDC90B-216ENST00000529856 TBC1D7Q9P0N9 293 aa13.87□□□□□ -0.19
CCDC90B-216ENST00000529856 ANKFY1Q9P2R3 1169 aa13.87□□□□□ -0.19
CCDC90B-216ENST00000529856 USP25Q9UHP3 1055 aa13.87□□□□□ -0.19
CCDC90B-216ENST00000529856 TRIP11Q15643 1979 aa13.86□□□□□ -0.19
CCDC90B-216ENST00000529856 FSCN2O14926 492 aa13.86□□□□□ -0.19
CCDC90B-216ENST00000529856 HNRNPDLO14979 420 aaKnown RBP13.86□□□□□ -0.19
CCDC90B-216ENST00000529856 ACTN4O43707 911 aaKnown RBP13.86□□□□□ -0.19
CCDC90B-216ENST00000529856 CSPG5O95196 566 aa13.86□□□□□ -0.19
CCDC90B-216ENST00000529856 THP07101 528 aa13.86□□□□□ -0.19
CCDC90B-216ENST00000529856 MATR3P43243 847 aaKnown RBP eCLIP13.86□□□□□ -0.193e-8■■■□□ 19
CCDC90B-216ENST00000529856 SYKP43405 635 aa13.86□□□□□ -0.19
CCDC90B-216ENST00000529856 OR1G1P47890 313 aa13.86□□□□□ -0.19
CCDC90B-216ENST00000529856 NDUFA8P51970 172 aa13.86□□□□□ -0.19
CCDC90B-216ENST00000529856 YARSP54577 528 aaKnown RBP13.86□□□□□ -0.19
CCDC90B-216ENST00000529856 ASIC1P78348 528 aa13.86□□□□□ -0.19
CCDC90B-216ENST00000529856 COASYQ13057 564 aa13.86□□□□□ -0.19
CCDC90B-216ENST00000529856 SKIV2LQ15477 1246 aaKnown RBP13.86□□□□□ -0.19
CCDC90B-216ENST00000529856 XKR4Q5GH76 650 aa13.86□□□□□ -0.19
CCDC90B-216ENST00000529856 SLC39A4Q6P5W5 647 aa13.86□□□□□ -0.19
CCDC90B-216ENST00000529856 DDX53Q86TM3 631 aaKnown RBP13.86□□□□□ -0.19
CCDC90B-216ENST00000529856 MICAL1Q8TDZ2 1067 aa13.86□□□□□ -0.19
CCDC90B-216ENST00000529856 BCL7CQ8WUZ0 217 aaPredicted RBP13.86□□□□□ -0.19
CCDC90B-216ENST00000529856 ACAP3Q96P50 834 aa13.86□□□□□ -0.19
CCDC90B-216ENST00000529856 PCDHB13Q9Y5F0 798 aa13.86□□□□□ -0.19
CCDC90B-216ENST00000529856 A0A0B4J269 797 aa13.85□□□□□ -0.19
CCDC90B-216ENST00000529856 ANKRD63C9JTQ0 380 aa13.85□□□□□ -0.19
CCDC90B-216ENST00000529856 NR1I2O75469 434 aa13.85□□□□□ -0.19
CCDC90B-216ENST00000529856 GCNT3O95395 438 aa13.85□□□□□ -0.19
CCDC90B-216ENST00000529856 MYBP10242 640 aa13.85□□□□□ -0.19
CCDC90B-216ENST00000529856 HARSP12081 509 aaKnown RBP13.85□□□□□ -0.19
CCDC90B-216ENST00000529856 CASP1P29466 404 aa13.85□□□□□ -0.19
CCDC90B-216ENST00000529856 AFMP43652 599 aa13.85□□□□□ -0.19
CCDC90B-216ENST00000529856 CASP5P51878 434 aa13.85□□□□□ -0.19
CCDC90B-216ENST00000529856 TUSC3Q13454 348 aa13.85□□□□□ -0.19
CCDC90B-216ENST00000529856 ALCAMQ13740 583 aa13.85□□□□□ -0.19
CCDC90B-216ENST00000529856 COL19A1Q14993 1142 aa13.85□□□□□ -0.19
CCDC90B-216ENST00000529856 NAB2Q15742 525 aa13.85□□□□□ -0.19
CCDC90B-216ENST00000529856 KYAT1Q16773 422 aa13.85□□□□□ -0.19
CCDC90B-216ENST00000529856 L1TD1Q5T7N2 865 aaKnown RBP13.85□□□□□ -0.19
CCDC90B-216ENST00000529856 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.85□□□□□ -0.19
CCDC90B-216ENST00000529856 GRAMD1CQ8IYS0 662 aa13.85□□□□□ -0.19
CCDC90B-216ENST00000529856 FSIP1Q8NA03 581 aa13.85□□□□□ -0.19
CCDC90B-216ENST00000529856 PAGE5Q96GU1 130 aa13.85□□□□□ -0.19
CCDC90B-216ENST00000529856 ACCSQ96QU6 501 aa13.85□□□□□ -0.19
CCDC90B-216ENST00000529856 COLEC11Q9BWP8 271 aa13.85□□□□□ -0.19
CCDC90B-216ENST00000529856 BLZF1Q9H2G9 400 aa13.85□□□□□ -0.19
CCDC90B-216ENST00000529856 NGRNQ9NPE2 291 aaKnown RBP13.85□□□□□ -0.19
CCDC90B-216ENST00000529856 TOPORSQ9NS56 1045 aaPredicted RBP13.85□□□□□ -0.19
CCDC90B-216ENST00000529856 COG5Q9UP83 839 aa13.85□□□□□ -0.19
CCDC90B-216ENST00000529856 EXOC7Q9UPT5 735 aa13.85□□□□□ -0.19
CCDC90B-216ENST00000529856 PCDHGC5Q9Y5F6 944 aa13.85□□□□□ -0.19
CCDC90B-216ENST00000529856 STYXL1Q9Y6J8 313 aa13.85□□□□□ -0.19
CCDC90B-216ENST00000529856 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.84□□□□□ -0.19
CCDC90B-216ENST00000529856 SMIM28A0A1B0GU29 152 aa13.84□□□□□ -0.19
CCDC90B-216ENST00000529856 PVALEFA0A1B0GWK0 134 aa13.84□□□□□ -0.19
CCDC90B-216ENST00000529856 OGTO15294 1046 aa13.84□□□□□ -0.19
CCDC90B-216ENST00000529856 MEFVO15553 781 aaPredicted RBP13.84□□□□□ -0.19
CCDC90B-216ENST00000529856 NCK2O43639 380 aa13.84□□□□□ -0.19
CCDC90B-216ENST00000529856 FAM189A1O60320 539 aa13.84□□□□□ -0.19
CCDC90B-216ENST00000529856 CLTAP09496 248 aa13.84□□□□□ -0.19
CCDC90B-216ENST00000529856 EHHADHQ08426 723 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms