RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 SCAND2PQ9GZW5 306 aaPredicted RBP6.01□□□□□ -1.45
C11orf88-204ENST00000529661 IFT122Q9HBG6 1241 aa6.01□□□□□ -1.45
C11orf88-204ENST00000529661 CCM2LQ9NUG4 571 aaPredicted RBP6.01□□□□□ -1.45
C11orf88-204ENST00000529661 MKS1Q9NXB0 559 aa6.01□□□□□ -1.45
C11orf88-204ENST00000529661 CEP72Q9P209 647 aa6.01□□□□□ -1.45
C11orf88-204ENST00000529661 HS3ST3A1Q9Y663 406 aa6.01□□□□□ -1.45
C11orf88-204ENST00000529661 RPTORQ8N122 1335 aa6□□□□□ -1.45
C11orf88-204ENST00000529661 KLRG2A4D1S0 409 aaPredicted RBP6□□□□□ -1.45
C11orf88-204ENST00000529661 PRC1O43663 620 aa6□□□□□ -1.45
C11orf88-204ENST00000529661 AKAP8O43823 692 aaKnown RBP6□□□□□ -1.45
C11orf88-204ENST00000529661 AKR1B10O60218 316 aa6□□□□□ -1.45
C11orf88-204ENST00000529661 ZNF202O95125 648 aa6□□□□□ -1.45
C11orf88-204ENST00000529661 OSMP13725 252 aa6□□□□□ -1.45
C11orf88-204ENST00000529661 TBX4P57082 545 aa6□□□□□ -1.45
C11orf88-204ENST00000529661 APBA1Q02410 837 aa6□□□□□ -1.45
C11orf88-204ENST00000529661 C19orf54Q5BKX5 351 aa6□□□□□ -1.45
C11orf88-204ENST00000529661 C1QL3Q5VWW1 255 aa6□□□□□ -1.45
C11orf88-204ENST00000529661 IGFL4Q6B9Z1 124 aa6□□□□□ -1.45
C11orf88-204ENST00000529661 BTNL9Q6UXG8 535 aa6□□□□□ -1.45
C11orf88-204ENST00000529661 XYLT1Q86Y38 959 aa6□□□□□ -1.45
C11orf88-204ENST00000529661 MAGEB6Q8N7X4 407 aa6□□□□□ -1.45
C11orf88-204ENST00000529661 MDM1Q8TC05 714 aa6□□□□□ -1.45
C11orf88-204ENST00000529661 CCDC136Q96JN2 1154 aa6□□□□□ -1.45
C11orf88-204ENST00000529661 CPEB1Q9BZB8 566 aaKnown RBP6□□□□□ -1.45
C11orf88-204ENST00000529661 GPRC5DQ9NZD1 345 aa6□□□□□ -1.45
C11orf88-204ENST00000529661 SRRDQ9UH36 339 aa6□□□□□ -1.45
C11orf88-204ENST00000529661 ZBTB21Q9ULJ3 1066 aa6□□□□□ -1.45
C11orf88-204ENST00000529661 REXO2Q9Y3B8 237 aaKnown RBP6□□□□□ -1.45
C11orf88-204ENST00000529661 MRFAP1Q9Y605 127 aa6□□□□□ -1.45
C11orf88-204ENST00000529661 ZMYM3Q14202 1370 aa5.99□□□□□ -1.45
C11orf88-204ENST00000529661 ADCY6O43306 1168 aa5.99□□□□□ -1.45
C11orf88-204ENST00000529661 PRPF3O43395 683 aaKnown RBP5.99□□□□□ -1.45
C11orf88-204ENST00000529661 FAM20BO75063 409 aa5.99□□□□□ -1.45
C11orf88-204ENST00000529661 TUBA3CQ13748 450 aa5.99□□□□□ -1.45
C11orf88-204ENST00000529661 ADRM1Q16186 407 aa5.99□□□□□ -1.45
C11orf88-204ENST00000529661 CXorf57Q6NSI4 855 aaKnown RBP5.99□□□□□ -1.45
C11orf88-204ENST00000529661 TUBA3EQ6PEY2 450 aa5.99□□□□□ -1.45
C11orf88-204ENST00000529661 KCNK18Q7Z418 384 aa5.99□□□□□ -1.45
C11orf88-204ENST00000529661 FAM83AQ86UY5 434 aa5.99□□□□□ -1.45
C11orf88-204ENST00000529661 PNMA8AQ86V59 439 aaPredicted RBP5.99□□□□□ -1.45
C11orf88-204ENST00000529661 ZFPM1Q8IX07 1006 aa5.99□□□□□ -1.45
C11orf88-204ENST00000529661 AMOTL1Q8IY63 956 aa5.99□□□□□ -1.45
C11orf88-204ENST00000529661 CMTR2Q8IYT2 770 aaKnown RBP5.99□□□□□ -1.45
C11orf88-204ENST00000529661 LILRA3Q8N6C8 439 aaPredicted RBP5.99□□□□□ -1.45
C11orf88-204ENST00000529661 RIN2Q8WYP3 895 aaPredicted RBP5.99□□□□□ -1.45
C11orf88-204ENST00000529661 FATE1Q969F0 183 aa5.99□□□□□ -1.45
C11orf88-204ENST00000529661 LSM14BQ9BX40 385 aaKnown RBP5.99□□□□□ -1.45
C11orf88-204ENST00000529661 ZNF703Q9H7S9 590 aaPredicted RBP5.99□□□□□ -1.45
C11orf88-204ENST00000529661 DMRT3Q9NQL9 472 aa5.99□□□□□ -1.45
C11orf88-204ENST00000529661 GABBR1Q9UBS5 961 aa5.99□□□□□ -1.45
C11orf88-204ENST00000529661 PNMA8BQ9ULN7 279 aaPredicted RBP5.99□□□□□ -1.45
C11orf88-204ENST00000529661 XDHP47989 1333 aa5.99□□□□□ -1.45
C11orf88-204ENST00000529661 CCDC194A0A1B0GVG4 234 aa5.98□□□□□ -1.45
C11orf88-204ENST00000529661 PRR5-ARHGAP8B1AHC4 643 aa5.98□□□□□ -1.45
C11orf88-204ENST00000529661 MAP4K4O95819 1239 aaPredicted RBP5.98□□□□□ -1.45
C11orf88-204ENST00000529661 U2AF1L5P0DN76 240 aaPredicted RBP5.98□□□□□ -1.45
C11orf88-204ENST00000529661 U2AF1Q01081 240 aaKnown RBP eCLIP5.98□□□□□ -1.45
C11orf88-204ENST00000529661 TOB2Q14106 344 aaPredicted RBP5.98□□□□□ -1.45
C11orf88-204ENST00000529661 HLTFQ14527 1009 aaKnown RBP eCLIP5.98□□□□□ -1.45
C11orf88-204ENST00000529661 MLC1Q15049 377 aa5.98□□□□□ -1.45
C11orf88-204ENST00000529661 CLUL1Q15846 466 aa5.98□□□□□ -1.45
C11orf88-204ENST00000529661 MST1LQ2TV78 715 aa5.98□□□□□ -1.45
C11orf88-204ENST00000529661 MUM1L1Q5H9M0 696 aa5.98□□□□□ -1.45
C11orf88-204ENST00000529661 DCAF17Q5H9S7 520 aaPredicted RBP5.98□□□□□ -1.45
C11orf88-204ENST00000529661 SPON1Q9HCB6 807 aa5.98□□□□□ -1.45
C11orf88-204ENST00000529661 SLC2A4RGQ9NR83 387 aa5.98□□□□□ -1.45
C11orf88-204ENST00000529661 ZNF277Q9NRM2 450 aaPredicted RBP5.98□□□□□ -1.45
C11orf88-204ENST00000529661 NOB1Q9ULX3 412 aaKnown RBP5.98□□□□□ -1.45
C11orf88-204ENST00000529661 GOLGA6CA6NDK9 693 aa5.97□□□□□ -1.45
C11orf88-204ENST00000529661 GOLGA6BA6NDN3 693 aa5.97□□□□□ -1.45
C11orf88-204ENST00000529661 NARSO43776 548 aaKnown RBP5.97□□□□□ -1.45
C11orf88-204ENST00000529661 PHF2O75151 1096 aa5.97□□□□□ -1.45
C11orf88-204ENST00000529661 GASTP01350 101 aa5.97□□□□□ -1.45
C11orf88-204ENST00000529661 GOLGA6DP0CG33 693 aa5.97□□□□□ -1.45
C11orf88-204ENST00000529661 ECHS1P30084 290 aa5.97□□□□□ -1.45
C11orf88-204ENST00000529661 PTPN7P35236 360 aa5.97□□□□□ -1.45
C11orf88-204ENST00000529661 GNALP38405 381 aa5.97□□□□□ -1.45
C11orf88-204ENST00000529661 MTNR1BP49286 362 aa5.97□□□□□ -1.45
C11orf88-204ENST00000529661 SLC5A3P53794 718 aa5.97□□□□□ -1.45
C11orf88-204ENST00000529661 SLC25A3Q00325 362 aa5.97□□□□□ -1.45
C11orf88-204ENST00000529661 GTF2H3Q13889 308 aa5.97□□□□□ -1.45
C11orf88-204ENST00000529661 RABL3Q5HYI8 236 aa5.97□□□□□ -1.45
C11orf88-204ENST00000529661 PRAMEF14Q5SWL7 426 aa5.97□□□□□ -1.45
C11orf88-204ENST00000529661 EFCAB2Q5VUJ9 269 aa5.97□□□□□ -1.45
C11orf88-204ENST00000529661 MBNL2Q5VZF2 373 aaKnown RBP5.97□□□□□ -1.45
C11orf88-204ENST00000529661 FAM180AQ6UWF9 173 aa5.97□□□□□ -1.45
C11orf88-204ENST00000529661 PDZD4Q76G19 769 aaPredicted RBP5.97□□□□□ -1.45
C11orf88-204ENST00000529661 TPH2Q8IWU9 490 aa5.97□□□□□ -1.45
C11orf88-204ENST00000529661 REPS2Q8NFH8 660 aa5.97□□□□□ -1.45
C11orf88-204ENST00000529661 GPR156Q8NFN8 814 aa5.97□□□□□ -1.45
C11orf88-204ENST00000529661 FBXO18Q8NFZ0 1043 aa5.97□□□□□ -1.45
C11orf88-204ENST00000529661 OR52N2Q8NGI0 321 aa5.97□□□□□ -1.45
C11orf88-204ENST00000529661 SSH1Q8WYL5 1049 aa5.97□□□□□ -1.45
C11orf88-204ENST00000529661 JADE3Q92613 823 aa5.97□□□□□ -1.45
C11orf88-204ENST00000529661 FAM193BQ96PV7 902 aaPredicted RBP5.97□□□□□ -1.45
C11orf88-204ENST00000529661 UHRF1Q96T88 793 aaPredicted RBP5.97□□□□□ -1.45
C11orf88-204ENST00000529661 NUP88Q99567 741 aaPredicted RBP5.97□□□□□ -1.45
C11orf88-204ENST00000529661 PDCD2LQ9BRP1 358 aa5.97□□□□□ -1.45
C11orf88-204ENST00000529661 ADI1Q9BV57 179 aa5.97□□□□□ -1.45
C11orf88-204ENST00000529661 PCGF6Q9BYE7 350 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms