RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 CASP5P51878 434 aa8.62□□□□□ -1.03
SSBP3-211ENST00000528787 RNASELQ05823 741 aaKnown RBP8.62□□□□□ -1.03
SSBP3-211ENST00000528787 MBTPS1Q14703 1052 aa8.62□□□□□ -1.03
SSBP3-211ENST00000528787 RAB30Q15771 203 aa8.62□□□□□ -1.03
SSBP3-211ENST00000528787 SNRNP35Q16560 246 aaKnown RBP8.62□□□□□ -1.03
SSBP3-211ENST00000528787 DPCR1Q3MIW9 517 aa8.62□□□□□ -1.03
SSBP3-211ENST00000528787 CCDC40Q4G0X9 1142 aa8.62□□□□□ -1.03
SSBP3-211ENST00000528787 FILIP1LQ4L180 1135 aa8.62□□□□□ -1.03
SSBP3-211ENST00000528787 CEP135Q66GS9 1140 aa8.62□□□□□ -1.03
SSBP3-211ENST00000528787 ECHDC2Q86YB7 292 aa8.62□□□□□ -1.03
SSBP3-211ENST00000528787 FAM200AQ8TCP9 573 aa8.62□□□□□ -1.03
SSBP3-211ENST00000528787 TMC2Q8TDI7 906 aa8.62□□□□□ -1.03
SSBP3-211ENST00000528787 TOP1MTQ969P6 601 aa8.62□□□□□ -1.03
SSBP3-211ENST00000528787 DDX27Q96GQ7 796 aaKnown RBP8.62□□□□□ -1.03
SSBP3-211ENST00000528787 ZNF668Q96K58 619 aaPredicted RBP8.62□□□□□ -1.03
SSBP3-211ENST00000528787 RNPC3Q96LT9 517 aaKnown RBP8.62□□□□□ -1.03
SSBP3-211ENST00000528787 FBXL18Q96ME1 805 aa8.62□□□□□ -1.03
SSBP3-211ENST00000528787 SAMD11Q96NU1 681 aa8.62□□□□□ -1.03
SSBP3-211ENST00000528787 TMEM117Q9H0C3 514 aa8.62□□□□□ -1.03
SSBP3-211ENST00000528787 CDT1Q9H211 546 aa8.62□□□□□ -1.03
SSBP3-211ENST00000528787 RSAD1Q9HA92 442 aa8.62□□□□□ -1.03
SSBP3-211ENST00000528787 POLD4Q9HCU8 107 aa8.62□□□□□ -1.03
SSBP3-211ENST00000528787 RBAKQ9NYW8 714 aaPredicted RBP8.62□□□□□ -1.03
SSBP3-211ENST00000528787 PARP2Q9UGN5 583 aa8.62□□□□□ -1.03
SSBP3-211ENST00000528787 ARMCX3Q9UH62 379 aaPredicted RBP8.62□□□□□ -1.03
SSBP3-211ENST00000528787 ZMYND8Q9ULU4 1186 aaPredicted RBP8.62□□□□□ -1.03
SSBP3-211ENST00000528787 C2CD2Q9Y426 696 aa8.62□□□□□ -1.03
SSBP3-211ENST00000528787 IPPQ9Y573 584 aa8.62□□□□□ -1.03
SSBP3-211ENST00000528787 TDRD15B5MCY1 1934 aaKnown RBP8.62□□□□□ -1.03
SSBP3-211ENST00000528787 UMODL1Q5DID0 1318 aa8.61□□□□□ -1.03
SSBP3-211ENST00000528787 INPPL1O15357 1258 aa8.61□□□□□ -1.03
SSBP3-211ENST00000528787 P4HA2O15460 535 aa8.61□□□□□ -1.03
SSBP3-211ENST00000528787 B4GALT5O43286 388 aa8.61□□□□□ -1.03
SSBP3-211ENST00000528787 TGFB1I1O43294 461 aa8.61□□□□□ -1.03
SSBP3-211ENST00000528787 TNNC2P02585 160 aa8.61□□□□□ -1.03
SSBP3-211ENST00000528787 THP07101 528 aa8.61□□□□□ -1.03
SSBP3-211ENST00000528787 SYN1P17600 705 aa8.61□□□□□ -1.03
SSBP3-211ENST00000528787 CYP3A5P20815 502 aa8.61□□□□□ -1.03
SSBP3-211ENST00000528787 RPL9P32969 192 aaKnown RBP8.61□□□□□ -1.03
SSBP3-211ENST00000528787 PPM1AP35813 382 aa8.61□□□□□ -1.03
SSBP3-211ENST00000528787 PNPLA4P41247 253 aa8.61□□□□□ -1.03
SSBP3-211ENST00000528787 MAGEA10P43363 369 aaPredicted RBP8.61□□□□□ -1.03
SSBP3-211ENST00000528787 CYP2J2P51589 502 aa8.61□□□□□ -1.03
SSBP3-211ENST00000528787 MARSP56192 900 aaKnown RBP8.61□□□□□ -1.03
SSBP3-211ENST00000528787 WDR5P61964 334 aaKnown RBP8.61□□□□□ -1.03
SSBP3-211ENST00000528787 GRIK3Q13003 919 aa8.61□□□□□ -1.03
SSBP3-211ENST00000528787 DUOXA2Q1HG44 320 aa8.61□□□□□ -1.03
SSBP3-211ENST00000528787 ANO6Q4KMQ2 910 aa8.61□□□□□ -1.03
SSBP3-211ENST00000528787 ZCWPW2Q504Y3 356 aa8.61□□□□□ -1.03
SSBP3-211ENST00000528787 ANKRD40Q6AI12 368 aa8.61□□□□□ -1.03
SSBP3-211ENST00000528787 ISM2Q6H9L7 571 aa8.61□□□□□ -1.03
SSBP3-211ENST00000528787 ZNF365Q70YC5 407 aa8.61□□□□□ -1.03
SSBP3-211ENST00000528787 TAS1R3Q7RTX0 852 aa8.61□□□□□ -1.03
SSBP3-211ENST00000528787 ZBTB33Q86T24 672 aa8.61□□□□□ -1.03
SSBP3-211ENST00000528787 WDR49Q8IV35 697 aa8.61□□□□□ -1.03
SSBP3-211ENST00000528787 FMNL3Q8IVF7 1028 aa8.61□□□□□ -1.03
SSBP3-211ENST00000528787 BRSK2Q8IWQ3 736 aa8.61□□□□□ -1.03
SSBP3-211ENST00000528787 FAM186BQ8IYM0 893 aa8.61□□□□□ -1.03
SSBP3-211ENST00000528787 THNSL1Q8IYQ7 743 aa8.61□□□□□ -1.03
SSBP3-211ENST00000528787 CMTR2Q8IYT2 770 aaKnown RBP8.61□□□□□ -1.03
SSBP3-211ENST00000528787 LRRC43Q8N309 656 aa8.61□□□□□ -1.03
SSBP3-211ENST00000528787 BEST2Q8NFU1 509 aa8.61□□□□□ -1.03
SSBP3-211ENST00000528787 ERCC4Q92889 916 aaPredicted RBP8.61□□□□□ -1.03
SSBP3-211ENST00000528787 HPS3Q969F9 1004 aa8.61□□□□□ -1.03
SSBP3-211ENST00000528787 ANKRD36BP1Q96IX9 119 aa8.61□□□□□ -1.03
SSBP3-211ENST00000528787 CPB2Q96IY4 423 aa8.61□□□□□ -1.03
SSBP3-211ENST00000528787 YME1L1Q96TA2 773 aa8.61□□□□□ -1.03
SSBP3-211ENST00000528787 RAD9AQ99638 391 aa8.61□□□□□ -1.03
SSBP3-211ENST00000528787 FAM213AQ9BRX8 229 aa8.61□□□□□ -1.03
SSBP3-211ENST00000528787 IMPG2Q9BZV3 1241 aa8.61□□□□□ -1.03
SSBP3-211ENST00000528787 FAM124BQ9H5Z6 455 aaPredicted RBP8.61□□□□□ -1.03
SSBP3-211ENST00000528787 DMAC2Q9NW81 257 aa8.61□□□□□ -1.03
SSBP3-211ENST00000528787 MSRAQ9UJ68 235 aa8.61□□□□□ -1.03
SSBP3-211ENST00000528787 CPSF3Q9UKF6 684 aaKnown RBP8.61□□□□□ -1.03
SSBP3-211ENST00000528787 UBQLN1Q9UMX0 589 aaKnown RBP8.61□□□□□ -1.03
SSBP3-211ENST00000528787 MAPK8IP1Q9UQF2 711 aa8.61□□□□□ -1.03
SSBP3-211ENST00000528787 DAAM1Q9Y4D1 1078 aa8.61□□□□□ -1.03
SSBP3-211ENST00000528787 TET1Q8NFU7 2136 aa8.6□□□□□ -1.03
SSBP3-211ENST00000528787 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.6□□□□□ -1.03
SSBP3-211ENST00000528787 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.6□□□□□ -1.03
SSBP3-211ENST00000528787 TRAPPC3O43617 180 aa8.6□□□□□ -1.03
SSBP3-211ENST00000528787 CSDE1O75534 798 aaKnown RBP8.6□□□□□ -1.03
SSBP3-211ENST00000528787 ADRB2P07550 413 aa8.6□□□□□ -1.03
SSBP3-211ENST00000528787 TMEM191BP0C7N4 346 aa8.6□□□□□ -1.03
SSBP3-211ENST00000528787 HARSP12081 509 aaKnown RBP8.6□□□□□ -1.03
SSBP3-211ENST00000528787 P4HA1P13674 534 aa8.6□□□□□ -1.03
SSBP3-211ENST00000528787 KCNE1P15382 129 aa8.6□□□□□ -1.03
SSBP3-211ENST00000528787 ATP2A2P16615 1042 aaKnown RBP8.6□□□□□ -1.03
SSBP3-211ENST00000528787 TNNI1P19237 187 aa8.6□□□□□ -1.03
SSBP3-211ENST00000528787 FGFR4P22455 802 aa8.6□□□□□ -1.03
SSBP3-211ENST00000528787 VAMP7P51809 220 aa8.6□□□□□ -1.03
SSBP3-211ENST00000528787 ELAVL2Q12926 359 aaKnown RBP8.6□□□□□ -1.03
SSBP3-211ENST00000528787 MYO1EQ12965 1108 aa8.6□□□□□ -1.03
SSBP3-211ENST00000528787 PSMD6Q15008 389 aa8.6□□□□□ -1.03
SSBP3-211ENST00000528787 NOMO2Q5JPE7 1267 aa8.6□□□□□ -1.03
SSBP3-211ENST00000528787 TMEM240Q5SV17 173 aa8.6□□□□□ -1.03
SSBP3-211ENST00000528787 TTI2Q6NXR4 508 aa8.6□□□□□ -1.03
SSBP3-211ENST00000528787 OTOP2Q7RTS6 562 aa8.6□□□□□ -1.03
SSBP3-211ENST00000528787 ZC3H3Q8IXZ2 948 aaKnown RBP8.6□□□□□ -1.03
SSBP3-211ENST00000528787 SMYD4Q8IYR2 804 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms