RNA–Protein interactions for RNA: ENST00000528611.1

MACF1-228, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-228ENST00000528611 SLC38A7Q9NVC3 462 aa6.78□□□□□ -1.32
MACF1-228ENST00000528611 TMEM161AQ9NX61 479 aa6.78□□□□□ -1.32
MACF1-228ENST00000528611 AGO2Q9UKV8 859 aaKnown RBP6.78□□□□□ -1.32
MACF1-228ENST00000528611 PIN4Q9Y237 131 aaKnown RBP6.78□□□□□ -1.32
MACF1-228ENST00000528611 GDAQ9Y2T3 454 aa6.78□□□□□ -1.32
MACF1-228ENST00000528611 C2CD2Q9Y426 696 aa6.78□□□□□ -1.32
MACF1-228ENST00000528611 A0A1W2PPC1 479 aa6.77□□□□□ -1.33
MACF1-228ENST00000528611 GTPBP10A4D1E9 387 aaKnown RBP6.77□□□□□ -1.33
MACF1-228ENST00000528611 TRIM43BA6NCK2 446 aa6.77□□□□□ -1.33
MACF1-228ENST00000528611 ENPP3O14638 875 aa6.77□□□□□ -1.33
MACF1-228ENST00000528611 EXOC3O60645 756 aa6.77□□□□□ -1.33
MACF1-228ENST00000528611 NBNO60934 754 aa6.77□□□□□ -1.33
MACF1-228ENST00000528611 N4BP1O75113 896 aaKnown RBP6.77□□□□□ -1.33
MACF1-228ENST00000528611 FGBP02675 491 aa6.77□□□□□ -1.33
MACF1-228ENST00000528611 AMHP03971 560 aa6.77□□□□□ -1.33
MACF1-228ENST00000528611 NR3C1P04150 777 aa6.77□□□□□ -1.33
MACF1-228ENST00000528611 TPM2P07951 284 aa6.77□□□□□ -1.33
MACF1-228ENST00000528611 FAM163BP0C2L3 166 aa6.77□□□□□ -1.33
MACF1-228ENST00000528611 GHRP10912 638 aa6.77□□□□□ -1.33
MACF1-228ENST00000528611 EPB41P11171 864 aaKnown RBP6.77□□□□□ -1.33
MACF1-228ENST00000528611 KCNE1P15382 129 aa6.77□□□□□ -1.33
MACF1-228ENST00000528611 NR2F2P24468 414 aa6.77□□□□□ -1.33
MACF1-228ENST00000528611 ADSSP30520 456 aa6.77□□□□□ -1.33
MACF1-228ENST00000528611 CETN1Q12798 172 aa6.77□□□□□ -1.33
MACF1-228ENST00000528611 NFX1Q12986 1120 aaKnown RBP6.77□□□□□ -1.33
MACF1-228ENST00000528611 TMEM132AQ24JP5 1023 aa6.77□□□□□ -1.33
MACF1-228ENST00000528611 ZNF568Q3ZCX4 644 aa6.77□□□□□ -1.33
MACF1-228ENST00000528611 TPRNQ4KMQ1 711 aa6.77□□□□□ -1.33
MACF1-228ENST00000528611 ANKRD40Q6AI12 368 aa6.77□□□□□ -1.33
MACF1-228ENST00000528611 TWF2Q6IBS0 349 aaKnown RBP6.77□□□□□ -1.33
MACF1-228ENST00000528611 NPAS4Q8IUM7 802 aa6.77□□□□□ -1.33
MACF1-228ENST00000528611 CRIPAKQ8N1N5 446 aa6.77□□□□□ -1.33
MACF1-228ENST00000528611 CSGALNACT2Q8N6G5 542 aa6.77□□□□□ -1.33
MACF1-228ENST00000528611 DBF4BQ8NFT6 615 aa6.77□□□□□ -1.33
MACF1-228ENST00000528611 CACTINQ8WUQ7 758 aaKnown RBP6.77□□□□□ -1.33
MACF1-228ENST00000528611 POMGNT1Q8WZA1 660 aa6.77□□□□□ -1.33
MACF1-228ENST00000528611 HERVK_113Q902F9 699 aa6.77□□□□□ -1.33
MACF1-228ENST00000528611 DPF3Q92784 378 aa6.77□□□□□ -1.33
MACF1-228ENST00000528611 TRIM43Q96BQ3 446 aaPredicted RBP6.77□□□□□ -1.33
MACF1-228ENST00000528611 IQCDQ96DY2 449 aa6.77□□□□□ -1.33
MACF1-228ENST00000528611 FAM81BQ96LP2 452 aa6.77□□□□□ -1.33
MACF1-228ENST00000528611 MFSD14AQ96MC6 490 aa6.77□□□□□ -1.33
MACF1-228ENST00000528611 ACAP3Q96P50 834 aa6.77□□□□□ -1.33
MACF1-228ENST00000528611 SLC9A7Q96T83 725 aa6.77□□□□□ -1.33
MACF1-228ENST00000528611 MSTO1Q9BUK6 570 aa6.77□□□□□ -1.33
MACF1-228ENST00000528611 MRPL9Q9BYD2 267 aaKnown RBP6.77□□□□□ -1.33
MACF1-228ENST00000528611 SEMA6BQ9H3T3 888 aa6.77□□□□□ -1.33
MACF1-228ENST00000528611 PDZD7Q9H5P4 517 aa6.77□□□□□ -1.33
MACF1-228ENST00000528611 AGO3Q9H9G7 860 aaKnown RBP6.77□□□□□ -1.33
MACF1-228ENST00000528611 HSPBP1Q9NZL4 362 aa6.77□□□□□ -1.33
MACF1-228ENST00000528611 CPSF3Q9UKF6 684 aaKnown RBP6.77□□□□□ -1.33
MACF1-228ENST00000528611 GINS2Q9Y248 185 aa6.77□□□□□ -1.33
MACF1-228ENST00000528611 TTC26A0AVF1 554 aa6.76□□□□□ -1.33
MACF1-228ENST00000528611 GOLGA6L19H0YKK7 550 aa6.76□□□□□ -1.33
MACF1-228ENST00000528611 BIN1O00499 593 aa6.76□□□□□ -1.33
MACF1-228ENST00000528611 FAM189A1O60320 539 aa6.76□□□□□ -1.33
MACF1-228ENST00000528611 TPM3P06753 285 aa6.76□□□□□ -1.33
MACF1-228ENST00000528611 CTSHP09668 335 aa6.76□□□□□ -1.33
MACF1-228ENST00000528611 KRT13P13646 458 aa6.76□□□□□ -1.33
MACF1-228ENST00000528611 CD52P31358 61 aa6.76□□□□□ -1.33
MACF1-228ENST00000528611 CYP2C18P33260 490 aa6.76□□□□□ -1.33
MACF1-228ENST00000528611 KCNA1Q09470 495 aa6.76□□□□□ -1.33
MACF1-228ENST00000528611 TMEM62Q0P6H9 643 aa6.76□□□□□ -1.33
MACF1-228ENST00000528611 PSMD6Q15008 389 aa6.76□□□□□ -1.33
MACF1-228ENST00000528611 IQCB1Q15051 598 aa6.76□□□□□ -1.33
MACF1-228ENST00000528611 SNRNP35Q16560 246 aaKnown RBP6.76□□□□□ -1.33
MACF1-228ENST00000528611 TPD52L1Q16890 204 aaPredicted RBP6.76□□□□□ -1.33
MACF1-228ENST00000528611 ANO6Q4KMQ2 910 aa6.76□□□□□ -1.33
MACF1-228ENST00000528611 RASIP1Q5U651 963 aa6.76□□□□□ -1.33
MACF1-228ENST00000528611 CDKAL1Q5VV42 579 aa6.76□□□□□ -1.33
MACF1-228ENST00000528611 SLC39A4Q6P5W5 647 aa6.76□□□□□ -1.33
MACF1-228ENST00000528611 ALKAL1Q6UXT8 129 aa6.76□□□□□ -1.33
MACF1-228ENST00000528611 LRRC55Q6ZSA7 311 aa6.76□□□□□ -1.33
MACF1-228ENST00000528611 ZNF598Q86UK7 904 aaKnown RBP6.76□□□□□ -1.33
MACF1-228ENST00000528611 ECHDC2Q86YB7 292 aa6.76□□□□□ -1.33
MACF1-228ENST00000528611 WDR49Q8IV35 697 aa6.76□□□□□ -1.33
MACF1-228ENST00000528611 BRSK2Q8IWQ3 736 aa6.76□□□□□ -1.33
MACF1-228ENST00000528611 PARD3BQ8TEW8 1205 aa6.76□□□□□ -1.33
MACF1-228ENST00000528611 TOP1MTQ969P6 601 aa6.76□□□□□ -1.33
MACF1-228ENST00000528611 ZBTB10Q96DT7 871 aa6.76□□□□□ -1.33
MACF1-228ENST00000528611 UROC1Q96N76 676 aa6.76□□□□□ -1.33
MACF1-228ENST00000528611 ADAM2Q99965 735 aa6.76□□□□□ -1.33
MACF1-228ENST00000528611 KIFC3Q9BVG8 833 aa6.76□□□□□ -1.33
MACF1-228ENST00000528611 PPP1R12CQ9BZL4 782 aa6.76□□□□□ -1.33
MACF1-228ENST00000528611 CDT1Q9H211 546 aa6.76□□□□□ -1.33
MACF1-228ENST00000528611 TMX1Q9H3N1 280 aa6.76□□□□□ -1.33
MACF1-228ENST00000528611 RPF1Q9H9Y2 349 aaKnown RBP6.76□□□□□ -1.33
MACF1-228ENST00000528611 CNTN3Q9P232 1028 aa6.76□□□□□ -1.33
MACF1-228ENST00000528611 MAGEC2Q9UBF1 373 aaPredicted RBP6.76□□□□□ -1.33
MACF1-228ENST00000528611 ARMCX3Q9UH62 379 aaPredicted RBP6.76□□□□□ -1.33
MACF1-228ENST00000528611 NFE2L3Q9Y4A8 694 aa6.76□□□□□ -1.33
MACF1-228ENST00000528611 PCDHB7Q9Y5E2 793 aa6.76□□□□□ -1.33
MACF1-228ENST00000528611 PCDHB2Q9Y5E7 798 aa6.76□□□□□ -1.33
MACF1-228ENST00000528611 COL4A6Q14031 1691 aa6.76□□□□□ -1.33
MACF1-228ENST00000528611 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.75□□□□□ -1.33
MACF1-228ENST00000528611 ARHGEF37A1IGU5 675 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 ANKRD63C9JTQ0 380 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 B4GALT5O43286 388 aa6.75□□□□□ -1.33
MACF1-228ENST00000528611 ZC3H11AO75152 810 aaKnown RBP eCLIP6.75□□□□□ -1.33
MACF1-228ENST00000528611 STAU1O95793 577 aaKnown RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms