RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 TNNI1P19237 187 aa15.92■□□□□ 0.14
ECHDC1-220ENST00000528402 GPC5P78333 572 aa15.92■□□□□ 0.14
ECHDC1-220ENST00000528402 POU5F1Q01860 360 aaKnown RBP15.92■□□□□ 0.14
ECHDC1-220ENST00000528402 GPS2Q13227 327 aa15.92■□□□□ 0.14
ECHDC1-220ENST00000528402 IRF5Q13568 498 aa15.92■□□□□ 0.14
ECHDC1-220ENST00000528402 MAPK6Q16659 721 aa15.92■□□□□ 0.14
ECHDC1-220ENST00000528402 CCL15Q16663 113 aa15.92■□□□□ 0.14
ECHDC1-220ENST00000528402 LONRF2Q1L5Z9 754 aa15.92■□□□□ 0.14
ECHDC1-220ENST00000528402 HSDL1Q3SXM5 330 aa15.92■□□□□ 0.14
ECHDC1-220ENST00000528402 BEND6Q5SZJ8 279 aaPredicted RBP15.92■□□□□ 0.14
ECHDC1-220ENST00000528402 PEX26Q7Z412 305 aa15.92■□□□□ 0.14
ECHDC1-220ENST00000528402 ACTRT1Q8TDG2 376 aa15.92■□□□□ 0.14
ECHDC1-220ENST00000528402 TAS1R2Q8TE23 839 aa15.92■□□□□ 0.14
ECHDC1-220ENST00000528402 PNKPQ96T60 521 aa15.92■□□□□ 0.14
ECHDC1-220ENST00000528402 CGRRF1Q99675 332 aa15.92■□□□□ 0.14
ECHDC1-220ENST00000528402 NFKBIZQ9BYH8 718 aa15.92■□□□□ 0.14
ECHDC1-220ENST00000528402 ACBD3Q9H3P7 528 aa15.92■□□□□ 0.14
ECHDC1-220ENST00000528402 EFCC1Q9HA90 598 aa15.92■□□□□ 0.14
ECHDC1-220ENST00000528402 GBA2Q9HCG7 927 aaPredicted RBP15.92■□□□□ 0.14
ECHDC1-220ENST00000528402 C1orf112Q9NSG2 853 aa15.92■□□□□ 0.14
ECHDC1-220ENST00000528402 SLC5A4Q9NY91 659 aa15.92■□□□□ 0.14
ECHDC1-220ENST00000528402 RBAKQ9NYW8 714 aaPredicted RBP15.92■□□□□ 0.14
ECHDC1-220ENST00000528402 PLXNA1Q9UIW2 1896 aa15.92■□□□□ 0.14
ECHDC1-220ENST00000528402 BTBD19C9JJ37 291 aa15.91■□□□□ 0.14
ECHDC1-220ENST00000528402 TBXAS1P24557 533 aaPredicted RBP15.91■□□□□ 0.14
ECHDC1-220ENST00000528402 MATR3P43243 847 aaKnown RBP eCLIP15.91■□□□□ 0.148e-7■■■■■ 31.9
ECHDC1-220ENST00000528402 PDE6CP51160 858 aa15.91■□□□□ 0.14
ECHDC1-220ENST00000528402 LAMTOR4Q0VGL1 99 aa15.91■□□□□ 0.14
ECHDC1-220ENST00000528402 GLIPR1L2Q4G1C9 344 aa15.91■□□□□ 0.14
ECHDC1-220ENST00000528402 MAMDC4Q6UXC1 1216 aa15.91■□□□□ 0.14
ECHDC1-220ENST00000528402 FBXO16Q8IX29 292 aaPredicted RBP15.91■□□□□ 0.14
ECHDC1-220ENST00000528402 RPUSD2Q8IZ73 545 aaKnown RBP15.91■□□□□ 0.14
ECHDC1-220ENST00000528402 SLC35G2Q8TBE7 412 aa15.91■□□□□ 0.14
ECHDC1-220ENST00000528402 KREMEN1Q96MU8 473 aa15.91■□□□□ 0.14
ECHDC1-220ENST00000528402 PARK7Q99497 189 aaKnown RBP15.91■□□□□ 0.14
ECHDC1-220ENST00000528402 POP1Q99575 1024 aaKnown RBP15.91■□□□□ 0.14
ECHDC1-220ENST00000528402 TARS2Q9BW92 718 aaKnown RBP15.91■□□□□ 0.14
ECHDC1-220ENST00000528402 CCDC113Q9H0I3 377 aa15.91■□□□□ 0.14
ECHDC1-220ENST00000528402 ABCB6Q9NP58 842 aa15.91■□□□□ 0.14
ECHDC1-220ENST00000528402 SEPT11Q9NVA2 429 aaKnown RBP15.91■□□□□ 0.14
ECHDC1-220ENST00000528402 L1RE1Q9UN81 338 aa15.91■□□□□ 0.14
ECHDC1-220ENST00000528402 STXBP5LQ9Y2K9 1186 aa15.91■□□□□ 0.14
ECHDC1-220ENST00000528402 COL1A2P08123 1366 aa15.9■□□□□ 0.14
ECHDC1-220ENST00000528402 MAP2K7O14733 419 aa15.9■□□□□ 0.14
ECHDC1-220ENST00000528402 NCK2O43639 380 aa15.9■□□□□ 0.14
ECHDC1-220ENST00000528402 MSCO60682 206 aa15.9■□□□□ 0.14
ECHDC1-220ENST00000528402 TBC1D8O95759 1140 aa15.9■□□□□ 0.14
ECHDC1-220ENST00000528402 FTCDO95954 541 aa15.9■□□□□ 0.14
ECHDC1-220ENST00000528402 TFRCP02786 760 aaKnown RBP15.9■□□□□ 0.14
ECHDC1-220ENST00000528402 CYP2C8P10632 490 aa15.9■□□□□ 0.14
ECHDC1-220ENST00000528402 USP8P40818 1118 aa15.9■□□□□ 0.14
ECHDC1-220ENST00000528402 VSNL1P62760 191 aa15.9■□□□□ 0.14
ECHDC1-220ENST00000528402 FAM193AP78312 1265 aa15.9■□□□□ 0.14
ECHDC1-220ENST00000528402 CDR2Q01850 454 aa15.9■□□□□ 0.14
ECHDC1-220ENST00000528402 PPP2R5EQ16537 467 aa15.9■□□□□ 0.14
ECHDC1-220ENST00000528402 CRELD2Q6UXH1 353 aaPredicted RBP15.9■□□□□ 0.14
ECHDC1-220ENST00000528402 DAAM2Q86T65 1068 aa15.9■□□□□ 0.14
ECHDC1-220ENST00000528402 PPTC7Q8NI37 304 aa15.9■□□□□ 0.14
ECHDC1-220ENST00000528402 EPS8L1Q8TE68 723 aa15.9■□□□□ 0.14
ECHDC1-220ENST00000528402 FUT8Q9BYC5 575 aa15.9■□□□□ 0.14
ECHDC1-220ENST00000528402 SUGCTQ9HAC7 445 aa15.9■□□□□ 0.14
ECHDC1-220ENST00000528402 NOCTQ9UK39 431 aaKnown RBP15.9■□□□□ 0.14
ECHDC1-220ENST00000528402 GOLGB1Q14789 3259 aaKnown RBP15.9■□□□□ 0.14
ECHDC1-220ENST00000528402 PLXNB2O15031 1838 aa15.9■□□□□ 0.14
ECHDC1-220ENST00000528402 ACKR2O00590 384 aa15.89■□□□□ 0.13
ECHDC1-220ENST00000528402 OGTO15294 1046 aa15.89■□□□□ 0.13
ECHDC1-220ENST00000528402 PPFIA4O75335 1185 aa15.89■□□□□ 0.13
ECHDC1-220ENST00000528402 MTA2O94776 668 aa15.89■□□□□ 0.13
ECHDC1-220ENST00000528402 SGPL1O95470 568 aa15.89■□□□□ 0.13
ECHDC1-220ENST00000528402 FTLP02792 175 aaPredicted RBP15.89■□□□□ 0.13
ECHDC1-220ENST00000528402 CYP11B1P15538 503 aa15.89■□□□□ 0.13
ECHDC1-220ENST00000528402 ADORA2AP29274 412 aa15.89■□□□□ 0.13
ECHDC1-220ENST00000528402 MAPK4P31152 587 aa15.89■□□□□ 0.13
ECHDC1-220ENST00000528402 NLRP11P59045 1033 aaKnown RBP15.89■□□□□ 0.13
ECHDC1-220ENST00000528402 TNNC1P63316 161 aa15.89■□□□□ 0.13
ECHDC1-220ENST00000528402 MCL1Q07820 350 aa15.89■□□□□ 0.13
ECHDC1-220ENST00000528402 MAP1SQ66K74 1059 aaPredicted RBP15.89■□□□□ 0.13
ECHDC1-220ENST00000528402 C11orf63Q6NUN7 778 aa15.89■□□□□ 0.13
ECHDC1-220ENST00000528402 TAPT1Q6NXT6 567 aa15.89■□□□□ 0.13
ECHDC1-220ENST00000528402 CCNI2Q6ZMN8 369 aaPredicted RBP15.89■□□□□ 0.13
ECHDC1-220ENST00000528402 NT5DC3Q86UY8 548 aa15.89■□□□□ 0.13
ECHDC1-220ENST00000528402 WDR49Q8IV35 697 aa15.89■□□□□ 0.13
ECHDC1-220ENST00000528402 BRSK2Q8IWQ3 736 aa15.89■□□□□ 0.13
ECHDC1-220ENST00000528402 ZNF516Q92618 1163 aa15.89■□□□□ 0.13
ECHDC1-220ENST00000528402 HES6Q96HZ4 224 aa15.89■□□□□ 0.13
ECHDC1-220ENST00000528402 NAP1L3Q99457 506 aaPredicted RBP15.89■□□□□ 0.13
ECHDC1-220ENST00000528402 ACO2Q99798 780 aaKnown RBP15.89■□□□□ 0.13
ECHDC1-220ENST00000528402 R3HDMLQ9H3Y0 253 aa15.89■□□□□ 0.13
ECHDC1-220ENST00000528402 VIPAS39Q9H9C1 493 aa15.89■□□□□ 0.13
ECHDC1-220ENST00000528402 ZNF408Q9H9D4 720 aa15.89■□□□□ 0.13
ECHDC1-220ENST00000528402 TTC7AQ9ULT0 858 aaPredicted RBP15.89■□□□□ 0.13
ECHDC1-220ENST00000528402 TRPC6Q9Y210 931 aa15.89■□□□□ 0.13
ECHDC1-220ENST00000528402 PCDHB2Q9Y5E7 798 aa15.89■□□□□ 0.13
ECHDC1-220ENST00000528402 MCM3APO60318 1980 aa15.89■□□□□ 0.13
ECHDC1-220ENST00000528402 SPDYE4A6NLX3 237 aa15.88■□□□□ 0.13
ECHDC1-220ENST00000528402 MIF4GDA9UHW6 222 aaKnown RBP15.88■□□□□ 0.13
ECHDC1-220ENST00000528402 ZBTB42B2RXF5 422 aa15.88■□□□□ 0.13
ECHDC1-220ENST00000528402 CCDC188H7C350 402 aa15.88■□□□□ 0.13
ECHDC1-220ENST00000528402 CYP26A1O43174 497 aa15.88■□□□□ 0.13
ECHDC1-220ENST00000528402 HLA-DRAP01903 254 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms