RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 ZBED1O96006 694 aa7.65□□□□□ -1.18
CTNND1-218ENST00000528232 S100BP04271 92 aaPredicted RBP7.65□□□□□ -1.18
CTNND1-218ENST00000528232 ARL4CP56559 192 aa7.65□□□□□ -1.18
CTNND1-218ENST00000528232 MRPS15P82914 257 aaKnown RBP7.65□□□□□ -1.18
CTNND1-218ENST00000528232 HDLBPQ00341 1268 aaKnown RBP7.65□□□□□ -1.18
CTNND1-218ENST00000528232 SPP2Q13103 211 aa7.65□□□□□ -1.18
CTNND1-218ENST00000528232 MMEL1Q495T6 779 aa7.65□□□□□ -1.18
CTNND1-218ENST00000528232 USP49Q70CQ1 688 aa7.65□□□□□ -1.18
CTNND1-218ENST00000528232 C7orf31Q8N865 590 aa7.65□□□□□ -1.18
CTNND1-218ENST00000528232 CCNYQ8ND76 341 aa7.65□□□□□ -1.18
CTNND1-218ENST00000528232 HSPH1Q92598 858 aa7.65□□□□□ -1.18
CTNND1-218ENST00000528232 CFAP36Q96G28 342 aa7.65□□□□□ -1.18
CTNND1-218ENST00000528232 RMI1Q9H9A7 625 aa7.65□□□□□ -1.18
CTNND1-218ENST00000528232 GID8Q9NWU2 228 aa7.65□□□□□ -1.18
CTNND1-218ENST00000528232 ARIH1Q9Y4X5 557 aaPredicted RBP7.65□□□□□ -1.18
CTNND1-218ENST00000528232 ANGPTL3Q9Y5C1 460 aa7.65□□□□□ -1.18
CTNND1-218ENST00000528232 FXR1P51114 621 aaKnown RBP eCLIP7.65□□□□□ -1.19
CTNND1-218ENST00000528232 KPNA2P52292 529 aaKnown RBP7.65□□□□□ -1.19
CTNND1-218ENST00000528232 CCDC15Q0P6D6 951 aa7.65□□□□□ -1.19
CTNND1-218ENST00000528232 STK4Q13043 487 aa7.65□□□□□ -1.19
CTNND1-218ENST00000528232 TFDP2Q14188 446 aa7.65□□□□□ -1.19
CTNND1-218ENST00000528232 SWT1Q5T5J6 900 aaKnown RBP7.65□□□□□ -1.19
CTNND1-218ENST00000528232 RSBN1LQ6PCB5 846 aaPredicted RBP7.65□□□□□ -1.19
CTNND1-218ENST00000528232 TBC1D1Q86TI0 1168 aaPredicted RBP7.65□□□□□ -1.19
CTNND1-218ENST00000528232 FAM151AQ8WW52 585 aa7.65□□□□□ -1.19
CTNND1-218ENST00000528232 SYN2Q92777 582 aaPredicted RBP7.65□□□□□ -1.19
CTNND1-218ENST00000528232 CATSPER2Q96P56 530 aa7.65□□□□□ -1.19
CTNND1-218ENST00000528232 TRIM56Q9BRZ2 755 aaKnown RBP7.65□□□□□ -1.19
CTNND1-218ENST00000528232 SLC12A6Q9UHW9 1150 aa7.65□□□□□ -1.19
CTNND1-218ENST00000528232 PSMD14O00487 310 aa7.65□□□□□ -1.19
CTNND1-218ENST00000528232 TRIM49P0CI25 452 aa7.65□□□□□ -1.19
CTNND1-218ENST00000528232 TRIM49CP0CI26 452 aa7.65□□□□□ -1.19
CTNND1-218ENST00000528232 RAP1GDS1P52306 607 aa7.65□□□□□ -1.19
CTNND1-218ENST00000528232 ARL13BQ3SXY8 428 aa7.65□□□□□ -1.19
CTNND1-218ENST00000528232 GLYCTKQ8IVS8 523 aa7.65□□□□□ -1.19
CTNND1-218ENST00000528232 DEPDC1BQ8WUY9 529 aa7.65□□□□□ -1.19
CTNND1-218ENST00000528232 HPS3Q969F9 1004 aa7.65□□□□□ -1.19
CTNND1-218ENST00000528232 CHP1Q99653 195 aa7.65□□□□□ -1.19
CTNND1-218ENST00000528232 TRIM15Q9C019 465 aa7.65□□□□□ -1.19
CTNND1-218ENST00000528232 KLC2Q9H0B6 622 aa7.65□□□□□ -1.19
CTNND1-218ENST00000528232 SAYSD1Q9NPB0 183 aa7.65□□□□□ -1.19
CTNND1-218ENST00000528232 APEX2Q9UBZ4 518 aa7.65□□□□□ -1.19
CTNND1-218ENST00000528232 TBK1Q9UHD2 729 aa7.65□□□□□ -1.19
CTNND1-218ENST00000528232 PRR12Q9ULL5 1215 aa7.65□□□□□ -1.19
CTNND1-218ENST00000528232 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.65□□□□□ -1.19
CTNND1-218ENST00000528232 ORC6Q9Y5N6 252 aa7.65□□□□□ -1.19
CTNND1-218ENST00000528232 SLIT3O75094 1523 aa7.65□□□□□ -1.19
CTNND1-218ENST00000528232 H0YC42 278 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 GYPCP04921 128 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 KRT10P13645 584 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 SLC1A1P43005 524 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 EFNA5P52803 228 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 SEC23AQ15436 765 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 CATSPER4Q7RTX7 472 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 MMP19Q99542 508 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 C11orf70Q9BRQ4 267 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 FUCA2Q9BTY2 467 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 JPH1Q9HDC5 661 aaPredicted RBP7.64□□□□□ -1.19
CTNND1-218ENST00000528232 TOPORSQ9NS56 1045 aaPredicted RBP7.64□□□□□ -1.19
CTNND1-218ENST00000528232 HSPBP1Q9NZL4 362 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 MID2Q9UJV3 735 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 AGO2Q9UKV8 859 aaKnown RBP7.64□□□□□ -1.19
CTNND1-218ENST00000528232 ACSL3O95573 720 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 MMEP08473 750 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 FMO5P49326 533 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 AP1B1Q10567 949 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 BBS9Q3SYG4 887 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 DAB2IPQ5VWQ8 1189 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 KLC3Q6P597 504 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 NLRP14Q86W24 1093 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 GSPT2Q8IYD1 628 aaKnown RBP7.64□□□□□ -1.19
CTNND1-218ENST00000528232 AGGF1Q8N302 714 aaeCLIP7.64□□□□□ -1.19
CTNND1-218ENST00000528232 SPATA4Q8NEY3 305 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 B4GALNT2Q8NHY0 566 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 SNF8Q96H20 258 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 PPP1R16BQ96T49 567 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 POLR3CQ9BUI4 534 aaPredicted RBP7.64□□□□□ -1.19
CTNND1-218ENST00000528232 VCPKMTQ9H867 229 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 SALL1Q9NSC2 1324 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 ABL1P00519 1130 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 KRT7P08729 469 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 GNAT1P11488 350 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 KLRK1P26718 216 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 RAD9BQ6WBX8 426 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 NYAP1Q6ZVC0 841 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 WDR75Q8IWA0 830 aaKnown RBP7.64□□□□□ -1.19
CTNND1-218ENST00000528232 RHOT1Q8IXI2 618 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 BEST2Q8NFU1 509 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 COG1Q8WTW3 980 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 ERGIC2Q96RQ1 377 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 TRIM55Q9BYV6 548 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 POLD4Q9HCU8 107 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 RBAKQ9NYW8 714 aaPredicted RBP7.64□□□□□ -1.19
CTNND1-218ENST00000528232 ATP11BQ9Y2G3 1177 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.64□□□□□ -1.19
CTNND1-218ENST00000528232 TBKBP1A7MCY6 615 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 C19orf81C9J6K1 198 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 FOXP2O15409 715 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 VCAM1P19320 739 aa7.64□□□□□ -1.19
CTNND1-218ENST00000528232 RPA1P27694 616 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms