RNA–Protein interactions for RNA: ENST00000528048.5

SDHD-205, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 1 (best) BASIC

Gene SDHD, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-205ENST00000528048 LIG4P49917 911 aa13.28□□□□□ -0.28
SDHD-205ENST00000528048 AFF1P51825 1210 aaKnown RBP13.28□□□□□ -0.28
SDHD-205ENST00000528048 ERVFC1P60507 584 aa13.28□□□□□ -0.28
SDHD-205ENST00000528048 KRT85P78386 507 aa13.28□□□□□ -0.28
SDHD-205ENST00000528048 GRIK3Q13003 919 aa13.28□□□□□ -0.28
SDHD-205ENST00000528048 CAMK1Q14012 370 aa13.28□□□□□ -0.28
SDHD-205ENST00000528048 SMC1AQ14683 1233 aaKnown RBP13.28□□□□□ -0.28
SDHD-205ENST00000528048 PLPP4Q5VZY2 271 aa13.28□□□□□ -0.28
SDHD-205ENST00000528048 ZPBP2Q6X784 338 aa13.28□□□□□ -0.28
SDHD-205ENST00000528048 DDX53Q86TM3 631 aaKnown RBP13.28□□□□□ -0.28
SDHD-205ENST00000528048 DDX12PQ92771 950 aa13.28□□□□□ -0.28
SDHD-205ENST00000528048 PABPC5Q96DU9 382 aaKnown RBP13.28□□□□□ -0.28
SDHD-205ENST00000528048 IGSF21Q96ID5 467 aa13.28□□□□□ -0.28
SDHD-205ENST00000528048 CDCA3Q99618 268 aaPredicted RBP13.28□□□□□ -0.28
SDHD-205ENST00000528048 PYM1Q9BRP8 204 aaKnown RBP13.28□□□□□ -0.28
SDHD-205ENST00000528048 CUEDC2Q9H467 287 aa13.28□□□□□ -0.28
SDHD-205ENST00000528048 MIOSQ9NXC5 875 aa13.28□□□□□ -0.28
SDHD-205ENST00000528048 DNAJB4Q9UDY4 337 aa13.28□□□□□ -0.28
SDHD-205ENST00000528048 RCOR1Q9UKL0 485 aa13.28□□□□□ -0.28
SDHD-205ENST00000528048 FAM50BQ9Y247 325 aa13.28□□□□□ -0.28
SDHD-205ENST00000528048 MYH9P35579 1960 aaKnown RBP13.27□□□□□ -0.28
SDHD-205ENST00000528048 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.27□□□□□ -0.29
SDHD-205ENST00000528048 INPPL1O15357 1258 aa13.27□□□□□ -0.29
SDHD-205ENST00000528048 TADA2AO75478 443 aa13.27□□□□□ -0.29
SDHD-205ENST00000528048 RECQL4O94761 1208 aa13.27□□□□□ -0.29
SDHD-205ENST00000528048 SRGAP2BP0DMP2 458 aa13.27□□□□□ -0.29
SDHD-205ENST00000528048 HARSP12081 509 aaKnown RBP13.27□□□□□ -0.29
SDHD-205ENST00000528048 IDEP14735 1019 aa13.27□□□□□ -0.29
SDHD-205ENST00000528048 GAP43P17677 238 aa13.27□□□□□ -0.29
SDHD-205ENST00000528048 GRM5P41594 1212 aa13.27□□□□□ -0.29
SDHD-205ENST00000528048 ZNF131P52739 623 aa13.27□□□□□ -0.29
SDHD-205ENST00000528048 NCKAP1LP55160 1127 aa13.27□□□□□ -0.29
SDHD-205ENST00000528048 TFF2Q03403 129 aa13.27□□□□□ -0.29
SDHD-205ENST00000528048 HYAL1Q12794 435 aa13.27□□□□□ -0.29
SDHD-205ENST00000528048 PUS10Q3MIT2 529 aaKnown RBP13.27□□□□□ -0.29
SDHD-205ENST00000528048 HERC4Q5GLZ8 1057 aaPredicted RBP13.27□□□□□ -0.29
SDHD-205ENST00000528048 MPZL3Q6UWV2 235 aa13.27□□□□□ -0.29
SDHD-205ENST00000528048 CCDC65Q8IXS2 484 aa13.27□□□□□ -0.29
SDHD-205ENST00000528048 COLGALT2Q8IYK4 626 aa13.27□□□□□ -0.29
SDHD-205ENST00000528048 VPS52Q8N1B4 723 aa13.27□□□□□ -0.29
SDHD-205ENST00000528048 LRRC15Q8TF66 581 aa13.27□□□□□ -0.29
SDHD-205ENST00000528048 SPATA32Q96LK8 384 aa13.27□□□□□ -0.29
SDHD-205ENST00000528048 ACAP3Q96P50 834 aa13.27□□□□□ -0.29
SDHD-205ENST00000528048 SEL1LQ9UBV2 794 aa13.27□□□□□ -0.29
SDHD-205ENST00000528048 TBX20Q9UMR3 447 aa13.27□□□□□ -0.29
SDHD-205ENST00000528048 PCDHA7Q9UN72 937 aa13.27□□□□□ -0.29
SDHD-205ENST00000528048 SSX2IPQ9Y2D8 614 aa13.27□□□□□ -0.29
SDHD-205ENST00000528048 PRG3Q9Y2Y8 225 aaPredicted RBP13.27□□□□□ -0.29
SDHD-205ENST00000528048 LAMA2P24043 3122 aaKnown RBP13.26□□□□□ -0.29
SDHD-205ENST00000528048 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.26□□□□□ -0.29
SDHD-205ENST00000528048 MYMKA6NI61 221 aa13.26□□□□□ -0.29
SDHD-205ENST00000528048 PER2O15055 1255 aa13.26□□□□□ -0.29
SDHD-205ENST00000528048 NDUFV1P49821 464 aa13.26□□□□□ -0.29
SDHD-205ENST00000528048 TTC3P53804 2025 aa13.26□□□□□ -0.29
SDHD-205ENST00000528048 OSTNP61366 133 aa13.26□□□□□ -0.29
SDHD-205ENST00000528048 NUCB2P80303 420 aa13.26□□□□□ -0.29
SDHD-205ENST00000528048 KYAT1Q16773 422 aa13.26□□□□□ -0.29
SDHD-205ENST00000528048 KIAA1841Q6NSI8 718 aa13.26□□□□□ -0.29
SDHD-205ENST00000528048 TAS1R3Q7RTX0 852 aa13.26□□□□□ -0.29
SDHD-205ENST00000528048 MRPL43Q8N983 215 aaKnown RBP13.26□□□□□ -0.29
SDHD-205ENST00000528048 DHX58Q96C10 678 aa13.26□□□□□ -0.29
SDHD-205ENST00000528048 SCAND2PQ9GZW5 306 aaPredicted RBP13.26□□□□□ -0.29
SDHD-205ENST00000528048 CDT1Q9H211 546 aa13.26□□□□□ -0.29
SDHD-205ENST00000528048 MRPL44Q9H9J2 332 aaKnown RBP13.26□□□□□ -0.29
SDHD-205ENST00000528048 PTPRHQ9HD43 1115 aa13.26□□□□□ -0.29
SDHD-205ENST00000528048 ANKFY1Q9P2R3 1169 aa13.26□□□□□ -0.29
SDHD-205ENST00000528048 ZMYM2Q9UBW7 1377 aa13.26□□□□□ -0.29
SDHD-205ENST00000528048 EXOC7Q9UPT5 735 aa13.26□□□□□ -0.29
SDHD-205ENST00000528048 DLL1O00548 723 aa13.25□□□□□ -0.29
SDHD-205ENST00000528048 FSCN2O14926 492 aa13.25□□□□□ -0.29
SDHD-205ENST00000528048 HNRNPDLO14979 420 aaKnown RBP13.25□□□□□ -0.29
SDHD-205ENST00000528048 POLR2DO15514 142 aaKnown RBP13.25□□□□□ -0.29
SDHD-205ENST00000528048 EDN1P05305 212 aa13.25□□□□□ -0.29
SDHD-205ENST00000528048 NMT1P30419 496 aaKnown RBP13.25□□□□□ -0.29
SDHD-205ENST00000528048 GTF2BQ00403 316 aa13.25□□□□□ -0.29
SDHD-205ENST00000528048 DSC1Q08554 894 aa13.25□□□□□ -0.29
SDHD-205ENST00000528048 ADAM15Q13444 863 aa13.25□□□□□ -0.29
SDHD-205ENST00000528048 NOLC1Q14978 699 aaKnown RBP eCLIP13.25□□□□□ -0.29
SDHD-205ENST00000528048 LEXMQ3ZCV2 418 aa13.25□□□□□ -0.29
SDHD-205ENST00000528048 AXDND1Q5T1B0 1012 aaPredicted RBP13.25□□□□□ -0.29
SDHD-205ENST00000528048 SLFN12LQ6IEE8 588 aa13.25□□□□□ -0.29
SDHD-205ENST00000528048 SHC4Q6S5L8 630 aa13.25□□□□□ -0.29
SDHD-205ENST00000528048 STXBP4Q6ZWJ1 553 aa13.25□□□□□ -0.29
SDHD-205ENST00000528048 ZNF720Q7Z2F6 126 aa13.25□□□□□ -0.29
SDHD-205ENST00000528048 ADGRD2Q7Z7M1 963 aa13.25□□□□□ -0.29
SDHD-205ENST00000528048 CEP57L1Q8IYX8 460 aa13.25□□□□□ -0.29
SDHD-205ENST00000528048 EFHBQ8N7U6 833 aa13.25□□□□□ -0.29
SDHD-205ENST00000528048 ZBTB45Q96K62 511 aaPredicted RBP13.25□□□□□ -0.29
SDHD-205ENST00000528048 TNMDQ9H2S6 317 aa13.25□□□□□ -0.29
SDHD-205ENST00000528048 MAGEF1Q9HAY2 307 aa13.25□□□□□ -0.29
SDHD-205ENST00000528048 PANK4Q9NVE7 773 aa13.25□□□□□ -0.29
SDHD-205ENST00000528048 ZDHHC9Q9Y397 364 aa13.25□□□□□ -0.29
SDHD-205ENST00000528048 A0A087X0B3 334 aa13.24□□□□□ -0.29
SDHD-205ENST00000528048 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.24□□□□□ -0.29
SDHD-205ENST00000528048 C2orf71A6NGG8 1288 aa13.24□□□□□ -0.29
SDHD-205ENST00000528048 H3BQ06 376 aaPredicted RBP13.24□□□□□ -0.29
SDHD-205ENST00000528048 URODP06132 367 aa13.24□□□□□ -0.29
SDHD-205ENST00000528048 CLTAP09496 248 aa13.24□□□□□ -0.29
SDHD-205ENST00000528048 CTSAP10619 480 aa13.24□□□□□ -0.29
SDHD-205ENST00000528048 PROZP22891 400 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms