RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 OTUD6AQ7L8S5 288 aa11.71□□□□□ -0.53
CPSF1-203ENST00000527916 MRPL10Q7Z7H8 261 aaKnown RBP11.71□□□□□ -0.53
CPSF1-203ENST00000527916 PALB2Q86YC2 1186 aa11.71□□□□□ -0.53
CPSF1-203ENST00000527916 POTEDQ86YR6 584 aa11.71□□□□□ -0.53
CPSF1-203ENST00000527916 RHPN2Q8IUC4 686 aa11.71□□□□□ -0.53
CPSF1-203ENST00000527916 ZSCAN31Q96LW9 406 aaPredicted RBP11.71□□□□□ -0.53
CPSF1-203ENST00000527916 DDX23Q9BUQ8 820 aaKnown RBP11.71□□□□□ -0.53
CPSF1-203ENST00000527916 FAM126AQ9BYI3 521 aaPredicted RBP11.71□□□□□ -0.53
CPSF1-203ENST00000527916 DHX33Q9H6R0 707 aaKnown RBP11.71□□□□□ -0.53
CPSF1-203ENST00000527916 ZSWIM4Q9H7M6 989 aa11.71□□□□□ -0.53
CPSF1-203ENST00000527916 SUCLA2Q9P2R7 463 aaPredicted RBP11.71□□□□□ -0.53
CPSF1-203ENST00000527916 RAB23Q9ULC3 237 aa11.71□□□□□ -0.53
CPSF1-203ENST00000527916 PCDHA12Q9UN75 941 aa11.71□□□□□ -0.53
CPSF1-203ENST00000527916 PRG3Q9Y2Y8 225 aaPredicted RBP11.71□□□□□ -0.53
CPSF1-203ENST00000527916 TMEM150BA6NC51 233 aa11.7□□□□□ -0.54
CPSF1-203ENST00000527916 FAM205CA6NFA0 338 aa11.7□□□□□ -0.54
CPSF1-203ENST00000527916 TGM5O43548 720 aa11.7□□□□□ -0.54
CPSF1-203ENST00000527916 DTNBO60941 627 aa11.7□□□□□ -0.54
CPSF1-203ENST00000527916 LILRB5O75023 590 aa11.7□□□□□ -0.54
CPSF1-203ENST00000527916 LYPLA2O95372 231 aa11.7□□□□□ -0.54
CPSF1-203ENST00000527916 RFC5P40937 340 aa11.7□□□□□ -0.54
CPSF1-203ENST00000527916 OR1G1P47890 313 aa11.7□□□□□ -0.54
CPSF1-203ENST00000527916 ST3GAL1Q11201 340 aa11.7□□□□□ -0.54
CPSF1-203ENST00000527916 SLC44A4Q53GD3 710 aa11.7□□□□□ -0.54
CPSF1-203ENST00000527916 TAS1R1Q7RTX1 841 aa11.7□□□□□ -0.54
CPSF1-203ENST00000527916 DIS3L2Q8IYB7 885 aaKnown RBP11.7□□□□□ -0.54
CPSF1-203ENST00000527916 GPR65Q8IYL9 337 aa11.7□□□□□ -0.54
CPSF1-203ENST00000527916 CNNM3Q8NE01 707 aa11.7□□□□□ -0.54
CPSF1-203ENST00000527916 SLC7A3Q8WY07 619 aa11.7□□□□□ -0.54
CPSF1-203ENST00000527916 CEP170P1Q96L14 293 aa11.7□□□□□ -0.54
CPSF1-203ENST00000527916 NLRP4Q96MN2 994 aa11.7□□□□□ -0.54
CPSF1-203ENST00000527916 HSD17B14Q9BPX1 270 aa11.7□□□□□ -0.54
CPSF1-203ENST00000527916 AGPAT5Q9NUQ2 364 aa11.7□□□□□ -0.54
CPSF1-203ENST00000527916 WRAP73Q9P2S5 460 aaPredicted RBP11.7□□□□□ -0.54
CPSF1-203ENST00000527916 CDH7Q9ULB5 785 aa11.7□□□□□ -0.54
CPSF1-203ENST00000527916 MYH15Q9Y2K3 1946 aa11.7□□□□□ -0.54
CPSF1-203ENST00000527916 CEP295Q9C0D2 2601 aa11.7□□□□□ -0.54
CPSF1-203ENST00000527916 F5P12259 2224 aa11.7□□□□□ -0.54
CPSF1-203ENST00000527916 ARID2Q68CP9 1835 aa11.7□□□□□ -0.54
CPSF1-203ENST00000527916 DOCK6Q96HP0 2047 aa11.69□□□□□ -0.54
CPSF1-203ENST00000527916 ANKRD11Q6UB99 2663 aaPredicted RBP11.69□□□□□ -0.54
CPSF1-203ENST00000527916 ASAP2O43150 1006 aa11.69□□□□□ -0.54
CPSF1-203ENST00000527916 SLITRK3O94933 977 aa11.69□□□□□ -0.54
CPSF1-203ENST00000527916 YWHABP31946 246 aaKnown RBP11.69□□□□□ -0.54
CPSF1-203ENST00000527916 RBM25P49756 843 aaKnown RBP11.69□□□□□ -0.54
CPSF1-203ENST00000527916 NRLP54845 237 aa11.69□□□□□ -0.54
CPSF1-203ENST00000527916 NPEPPSP55786 919 aa11.69□□□□□ -0.54
CPSF1-203ENST00000527916 PPP2R5DQ14738 602 aa11.69□□□□□ -0.54
CPSF1-203ENST00000527916 SAFBQ15424 915 aaKnown RBP eCLIP11.69□□□□□ -0.54
CPSF1-203ENST00000527916 CALCRLQ16602 461 aa11.69□□□□□ -0.54
CPSF1-203ENST00000527916 USP41Q3LFD5 358 aa11.69□□□□□ -0.54
CPSF1-203ENST00000527916 C8orf34Q49A92 452 aa11.69□□□□□ -0.54
CPSF1-203ENST00000527916 PPM1JQ5JR12 505 aa11.69□□□□□ -0.54
CPSF1-203ENST00000527916 PLA2G4FQ68DD2 849 aa11.69□□□□□ -0.54
CPSF1-203ENST00000527916 PARM1Q6UWI2 310 aa11.69□□□□□ -0.54
CPSF1-203ENST00000527916 ST13P5Q8NFI4 369 aaPredicted RBP11.69□□□□□ -0.54
CPSF1-203ENST00000527916 NETO1Q8TDF5 533 aa11.69□□□□□ -0.54
CPSF1-203ENST00000527916 TCP11Q8WWU5 503 aa11.69□□□□□ -0.54
CPSF1-203ENST00000527916 NELL1Q92832 810 aa11.69□□□□□ -0.54
CPSF1-203ENST00000527916 FGF14Q92915 247 aa11.69□□□□□ -0.54
CPSF1-203ENST00000527916 MTMR9Q96QG7 549 aa11.69□□□□□ -0.54
CPSF1-203ENST00000527916 KIF2CQ99661 725 aa11.69□□□□□ -0.54
CPSF1-203ENST00000527916 SH2D3AQ9BRG2 576 aa11.69□□□□□ -0.54
CPSF1-203ENST00000527916 LXNQ9BS40 222 aa11.69□□□□□ -0.54
CPSF1-203ENST00000527916 RPP25Q9BUL9 199 aaKnown RBP11.69□□□□□ -0.54
CPSF1-203ENST00000527916 COLEC11Q9BWP8 271 aa11.69□□□□□ -0.54
CPSF1-203ENST00000527916 TTC12Q9H892 705 aaPredicted RBP11.69□□□□□ -0.54
CPSF1-203ENST00000527916 LTB4R2Q9NPC1 389 aa11.69□□□□□ -0.54
CPSF1-203ENST00000527916 SH2B1Q9NRF2 756 aaPredicted RBP11.69□□□□□ -0.54
CPSF1-203ENST00000527916 MARCH5Q9NX47 278 aa11.69□□□□□ -0.54
CPSF1-203ENST00000527916 RGL1Q9NZL6 768 aa11.69□□□□□ -0.54
CPSF1-203ENST00000527916 FNIP2Q9P278 1114 aa11.69□□□□□ -0.54
CPSF1-203ENST00000527916 MRPS17Q9Y2R5 130 aaKnown RBP11.69□□□□□ -0.54
CPSF1-203ENST00000527916 PATJQ8NI35 1801 aa11.68□□□□□ -0.54
CPSF1-203ENST00000527916 NEMFO60524 1076 aa11.68□□□□□ -0.54
CPSF1-203ENST00000527916 ZMYND10O75800 440 aa11.68□□□□□ -0.54
CPSF1-203ENST00000527916 XRCC6P12956 609 aaKnown RBP eCLIP11.68□□□□□ -0.54
CPSF1-203ENST00000527916 ITGA4P13612 1032 aa11.68□□□□□ -0.54
CPSF1-203ENST00000527916 NCLP19338 710 aaKnown RBP11.68□□□□□ -0.54
CPSF1-203ENST00000527916 TGM1P22735 817 aa11.68□□□□□ -0.54
CPSF1-203ENST00000527916 RPS9P46781 194 aaKnown RBP11.68□□□□□ -0.54
CPSF1-203ENST00000527916 AFF1P51825 1210 aaKnown RBP11.68□□□□□ -0.54
CPSF1-203ENST00000527916 HMGN5P82970 282 aaKnown RBP11.68□□□□□ -0.54
CPSF1-203ENST00000527916 POU5F1BQ06416 359 aa11.68□□□□□ -0.54
CPSF1-203ENST00000527916 DMWDQ09019 674 aa11.68□□□□□ -0.54
CPSF1-203ENST00000527916 ORC2Q13416 577 aaPredicted RBP11.68□□□□□ -0.54
CPSF1-203ENST00000527916 LIN9Q5TKA1 542 aa11.68□□□□□ -0.54
CPSF1-203ENST00000527916 NCAPH2Q6IBW4 605 aa11.68□□□□□ -0.54
CPSF1-203ENST00000527916 SRGAP1Q7Z6B7 1085 aa11.68□□□□□ -0.54
CPSF1-203ENST00000527916 GRASPQ7Z6J2 395 aaPredicted RBP11.68□□□□□ -0.54
CPSF1-203ENST00000527916 COLGALT2Q8IYK4 626 aa11.68□□□□□ -0.54
CPSF1-203ENST00000527916 RNF168Q8IYW5 571 aaPredicted RBP11.68□□□□□ -0.54
CPSF1-203ENST00000527916 ZNF579Q8NAF0 562 aaKnown RBP11.68□□□□□ -0.54
CPSF1-203ENST00000527916 PSPC1Q8WXF1 523 aaKnown RBP11.68□□□□□ -0.54
CPSF1-203ENST00000527916 CLDN23Q96B33 292 aa11.68□□□□□ -0.54
CPSF1-203ENST00000527916 DYDC2Q96IM9 177 aa11.68□□□□□ -0.54
CPSF1-203ENST00000527916 EIF2AK1Q9BQI3 630 aaKnown RBP11.68□□□□□ -0.54
CPSF1-203ENST00000527916 FOXP1Q9H334 677 aaPredicted RBP11.68□□□□□ -0.54
CPSF1-203ENST00000527916 IFT122Q9HBG6 1241 aa11.68□□□□□ -0.54
CPSF1-203ENST00000527916 CHST7Q9NS84 486 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms