RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 SMG5Q9UPR3 1016 aaKnown RBP13.7□□□□□ -0.22
SRPRA-202ENST00000527817 MYH15Q9Y2K3 1946 aa13.7□□□□□ -0.22
SRPRA-202ENST00000527817 F5P12259 2224 aa13.7□□□□□ -0.22
SRPRA-202ENST00000527817 CACNA1GO43497 2377 aa13.69□□□□□ -0.22
SRPRA-202ENST00000527817 MAP1BP46821 2468 aaKnown RBP13.69□□□□□ -0.22
SRPRA-202ENST00000527817 XYLBO75191 536 aa13.69□□□□□ -0.22
SRPRA-202ENST00000527817 POU2F2P09086 479 aa13.69□□□□□ -0.22
SRPRA-202ENST00000527817 YWHABP31946 246 aaKnown RBP13.69□□□□□ -0.22
SRPRA-202ENST00000527817 NTHL1P78549 312 aa13.69□□□□□ -0.22
SRPRA-202ENST00000527817 GRIK3Q13003 919 aa13.69□□□□□ -0.22
SRPRA-202ENST00000527817 EMC2Q15006 297 aa13.69□□□□□ -0.22
SRPRA-202ENST00000527817 AMHR2Q16671 573 aa13.69□□□□□ -0.22
SRPRA-202ENST00000527817 RTP2Q5QGT7 225 aa13.69□□□□□ -0.22
SRPRA-202ENST00000527817 PPM1LQ5SGD2 360 aa13.69□□□□□ -0.22
SRPRA-202ENST00000527817 GALNT17Q6IS24 598 aa13.69□□□□□ -0.22
SRPRA-202ENST00000527817 PRSS55Q6UWB4 352 aaPredicted RBP13.69□□□□□ -0.22
SRPRA-202ENST00000527817 MAMSTRQ6ZN01 415 aa13.69□□□□□ -0.22
SRPRA-202ENST00000527817 RTL10Q7L3V2 364 aa13.69□□□□□ -0.22
SRPRA-202ENST00000527817 FAM177A1Q8N128 213 aaPredicted RBP13.69□□□□□ -0.22
SRPRA-202ENST00000527817 DAGLBQ8NCG7 672 aa13.69□□□□□ -0.22
SRPRA-202ENST00000527817 PIK3R5Q8WYR1 880 aa13.69□□□□□ -0.22
SRPRA-202ENST00000527817 TTPALQ9BTX7 342 aa13.69□□□□□ -0.22
SRPRA-202ENST00000527817 TRIM6Q9C030 488 aaPredicted RBP13.69□□□□□ -0.22
SRPRA-202ENST00000527817 SLKQ9H2G2 1235 aaPredicted RBP13.69□□□□□ -0.22
SRPRA-202ENST00000527817 KCNMB3Q9NPA1 279 aa13.69□□□□□ -0.22
SRPRA-202ENST00000527817 VAV3Q9UKW4 847 aa13.69□□□□□ -0.22
SRPRA-202ENST00000527817 CDV3Q9UKY7 258 aaKnown RBP13.69□□□□□ -0.22
SRPRA-202ENST00000527817 KCNH3Q9ULD8 1083 aa13.69□□□□□ -0.22
SRPRA-202ENST00000527817 ZMYM2Q9UBW7 1377 aa13.69□□□□□ -0.22
SRPRA-202ENST00000527817 SF3B1O75533 1304 aaKnown RBP eCLIP13.68□□□□□ -0.22
SRPRA-202ENST00000527817 DCDC2BA2VCK2 349 aa13.68□□□□□ -0.22
SRPRA-202ENST00000527817 INO80B-WBP1J3KQ70 363 aa13.68□□□□□ -0.22
SRPRA-202ENST00000527817 ARF4P18085 180 aaPredicted RBP13.68□□□□□ -0.22
SRPRA-202ENST00000527817 CD72P21854 359 aa13.68□□□□□ -0.22
SRPRA-202ENST00000527817 PDIA3P30101 505 aaKnown RBP13.68□□□□□ -0.22
SRPRA-202ENST00000527817 EVCP57679 992 aa13.68□□□□□ -0.22
SRPRA-202ENST00000527817 FZD5Q13467 585 aa13.68□□□□□ -0.22
SRPRA-202ENST00000527817 TFDP1Q14186 410 aa13.68□□□□□ -0.22
SRPRA-202ENST00000527817 HSP90AA2PQ14568 343 aaPredicted RBP13.68□□□□□ -0.22
SRPRA-202ENST00000527817 XKR9Q5GH70 373 aa13.68□□□□□ -0.22
SRPRA-202ENST00000527817 BMP2KLQ5H9B9 411 aa13.68□□□□□ -0.22
SRPRA-202ENST00000527817 LIN9Q5TKA1 542 aa13.68□□□□□ -0.22
SRPRA-202ENST00000527817 ITFG1Q8TB96 612 aa13.68□□□□□ -0.22
SRPRA-202ENST00000527817 LNX1Q8TBB1 728 aaPredicted RBP13.68□□□□□ -0.22
SRPRA-202ENST00000527817 PHF20Q9BVI0 1012 aa13.68□□□□□ -0.22
SRPRA-202ENST00000527817 APOL6Q9BWW8 343 aa13.68□□□□□ -0.22
SRPRA-202ENST00000527817 NXF3Q9H4D5 531 aaKnown RBP13.68□□□□□ -0.22
SRPRA-202ENST00000527817 ZSWIM4Q9H7M6 989 aa13.68□□□□□ -0.22
SRPRA-202ENST00000527817 CHD6Q8TD26 2715 aa13.68□□□□□ -0.22
SRPRA-202ENST00000527817 CFAP47Q6ZTR5 3102 aa13.67□□□□□ -0.22
SRPRA-202ENST00000527817 A0A1B0GUA9 196 aa13.67□□□□□ -0.22
SRPRA-202ENST00000527817 ZBTB39O15060 712 aa13.67□□□□□ -0.22
SRPRA-202ENST00000527817 CCL16O15467 120 aa13.67□□□□□ -0.22
SRPRA-202ENST00000527817 SLC37A4O43826 429 aa13.67□□□□□ -0.22
SRPRA-202ENST00000527817 ECI2O75521 394 aa13.67□□□□□ -0.22
SRPRA-202ENST00000527817 C8AP07357 584 aa13.67□□□□□ -0.22
SRPRA-202ENST00000527817 AKAP5P24588 427 aa13.67□□□□□ -0.22
SRPRA-202ENST00000527817 TARSP26639 723 aaKnown RBP13.67□□□□□ -0.22
SRPRA-202ENST00000527817 CCT2P78371 535 aaKnown RBP13.67□□□□□ -0.22
SRPRA-202ENST00000527817 MBTD1Q05BQ5 628 aa13.67□□□□□ -0.22
SRPRA-202ENST00000527817 SSRP1Q08945 709 aaKnown RBP13.67□□□□□ -0.22
SRPRA-202ENST00000527817 NPY5RQ15761 445 aa13.67□□□□□ -0.22
SRPRA-202ENST00000527817 INF2Q27J81 1249 aa13.67□□□□□ -0.22
SRPRA-202ENST00000527817 PPP4R3AQ6IN85 833 aa13.67□□□□□ -0.22
SRPRA-202ENST00000527817 PDXDC1Q6P996 788 aa13.67□□□□□ -0.22
SRPRA-202ENST00000527817 SLC27A1Q6PCB7 646 aa13.67□□□□□ -0.22
SRPRA-202ENST00000527817 BLOC1S2Q6QNY1 142 aa13.67□□□□□ -0.22
SRPRA-202ENST00000527817 ZNF852Q6ZMS4 543 aa13.67□□□□□ -0.22
SRPRA-202ENST00000527817 RABGGTAQ92696 567 aa13.67□□□□□ -0.22
SRPRA-202ENST00000527817 JAKMIP1Q96N16 626 aaKnown RBP13.67□□□□□ -0.22
SRPRA-202ENST00000527817 MTRQ99707 1265 aa13.67□□□□□ -0.22
SRPRA-202ENST00000527817 KXD1Q9BQD3 176 aa13.67□□□□□ -0.22
SRPRA-202ENST00000527817 LXNQ9BS40 222 aa13.67□□□□□ -0.22
SRPRA-202ENST00000527817 NFKBIZQ9BYH8 718 aa13.67□□□□□ -0.22
SRPRA-202ENST00000527817 XPNPEP1Q9NQW7 623 aa13.67□□□□□ -0.22
SRPRA-202ENST00000527817 PRMT8Q9NR22 394 aaPredicted RBP13.67□□□□□ -0.22
SRPRA-202ENST00000527817 RGL1Q9NZL6 768 aa13.67□□□□□ -0.22
SRPRA-202ENST00000527817 DNMT3BQ9UBC3 853 aaKnown RBP13.67□□□□□ -0.22
SRPRA-202ENST00000527817 MRPS17Q9Y2R5 130 aaKnown RBP13.67□□□□□ -0.22
SRPRA-202ENST00000527817 NOTCH4Q99466 2003 aa13.67□□□□□ -0.22
SRPRA-202ENST00000527817 PATJQ8NI35 1801 aa13.67□□□□□ -0.22
SRPRA-202ENST00000527817 TBX3O15119 743 aa13.66□□□□□ -0.22
SRPRA-202ENST00000527817 ADRB1P08588 477 aa13.66□□□□□ -0.22
SRPRA-202ENST00000527817 RPS6KB1P23443 525 aa13.66□□□□□ -0.22
SRPRA-202ENST00000527817 ARL2P36404 184 aa13.66□□□□□ -0.22
SRPRA-202ENST00000527817 NRLP54845 237 aa13.66□□□□□ -0.22
SRPRA-202ENST00000527817 ADCY1Q08828 1119 aa13.66□□□□□ -0.22
SRPRA-202ENST00000527817 ELAVL2Q12926 359 aaKnown RBP13.66□□□□□ -0.22
SRPRA-202ENST00000527817 TUSC3Q13454 348 aa13.66□□□□□ -0.22
SRPRA-202ENST00000527817 RAB33AQ14088 237 aa13.66□□□□□ -0.22
SRPRA-202ENST00000527817 PSMD5Q16401 504 aa13.66□□□□□ -0.22
SRPRA-202ENST00000527817 FAM171A1Q5VUB5 890 aa13.66□□□□□ -0.22
SRPRA-202ENST00000527817 KRT25Q7Z3Z0 450 aa13.66□□□□□ -0.22
SRPRA-202ENST00000527817 NPAS3Q8IXF0 933 aa13.66□□□□□ -0.22
SRPRA-202ENST00000527817 TRIM22Q8IYM9 498 aa13.66□□□□□ -0.22
SRPRA-202ENST00000527817 HAS1Q92839 578 aa13.66□□□□□ -0.22
SRPRA-202ENST00000527817 PAAF1Q9BRP4 392 aa13.66□□□□□ -0.22
SRPRA-202ENST00000527817 NCOA5Q9HCD5 579 aaKnown RBP13.66□□□□□ -0.22
SRPRA-202ENST00000527817 PARD6AQ9NPB6 346 aa13.66□□□□□ -0.22
SRPRA-202ENST00000527817 BMP2KQ9NSY1 1161 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms